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RPL23
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BRAIN SPINAL CORD Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:1002.7 nTPM
HPA Brain:417.8 nTPM
GTEx:1002.7 nTPM
FANTOM5:420.2 Scaled Tags Per Million
Pig:20.0 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

417.8
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 312.9
1981 Female, age 72, midline 385.5
2565 Male, age 75, midline 353.9
2048 Male, age 55, midline 300.2
2816 Male, age 47, midline 263.9
2194 Female, age 79, both hemispheres 260.9
Cervical spinal cord, dorsal horn
nTPM: 347.5
2173 Female, age 72, unknown 426.0
2069 Male, age 47, both hemispheres 423.7
2296 Male, age 66, both hemispheres 393.1
1877 Male, age 55, unknown 354.6
2721 Male, age 90, both hemispheres 270.8
2297 Male, age 75, both hemispheres 216.6
Cervical spinal cord, ventral horn
nTPM: 417.8
2098 Female, age 72, unknown 553.5
2480 Male, age 75, both hemispheres 526.9
2809 Male, age 90, both hemispheres 518.9
2295 Male, age 66, both hemispheres 350.5
2068 Male, age 55, unknown 332.8
2820 Female, age 79, both hemispheres 223.9

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1002.7
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 1002.7
Samples: 159

Max nTPM: 2069.8
Min nTPM: 480.1
Std nTPM: 292.9
Median nTPM: 951.2
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 2069.8
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 1913.4
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 1805.6
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 1631.8
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 1616.9
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 1606.4
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 1598.7
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 1563.2
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 1545.3
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 1499.9
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 1468.4
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 1462.9
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 1395.3
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 1390.1
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 1385.4
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 1370.9
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 1364.7
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 1349.1
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 1346.6
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 1345.3
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 1343.2
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 1337.7
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 1336.5
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 1327.3
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 1322.8
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 1310.5
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 1288.3
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 1283.9
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 1283.2
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 1258.0
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 1240.3
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 1230.0
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 1219.7
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 1216.3
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 1205.8
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 1205.1
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 1180.0
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 1168.0
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 1164.6
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 1159.9
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 1158.0
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 1153.9
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 1152.7
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 1150.6
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 1149.2
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 1148.8
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 1141.7
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 1137.4
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 1132.7
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 1130.8
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 1118.4
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 1113.7
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 1104.8
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 1103.4
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 1103.3
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 1102.9
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 1102.8
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 1102.6
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 1088.2
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 1088.0
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 1077.2
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 1073.8
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 1066.8
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 1060.9
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 1053.9
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 1051.1
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 1044.3
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 1031.8
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 1023.0
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 1022.7
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 1019.7
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 1018.8
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 989.5
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 989.0
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 983.7
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 977.3
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 962.6
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 961.6
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 957.5
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 951.2
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 939.5
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 939.1
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 938.2
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 934.4
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 926.2
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 924.9
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 919.5
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 911.4
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 909.1
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 908.6
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 907.6
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 906.1
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 904.1
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 897.2
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 895.3
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 895.0
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 891.7
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 884.4
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 881.2
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 876.9
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 874.3
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 873.2
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 872.7
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 867.7
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 866.1
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 860.6
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 859.3
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 859.0
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 844.1
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 843.0
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 839.3
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 839.1
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 837.2
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 825.8
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 822.7
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 821.9
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 816.3
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 803.4
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 803.0
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 790.2
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 781.6
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 780.4
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 777.6
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 770.2
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 759.6
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 757.0
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 754.1
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 751.6
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 746.0
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 732.9
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 725.4
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 712.3
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 704.3
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 697.1
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 680.8
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 679.8
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 678.5
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 671.4
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 665.5
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 664.2
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 661.1
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 661.1
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 651.7
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 651.5
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 634.9
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 632.3
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 628.1
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 619.7
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 615.9
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 613.1
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 611.1
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 603.0
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 597.5
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 576.8
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 572.2
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 524.8
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 497.5
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 490.8
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 480.1
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

420.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 420.2
FF:10181-103D1 60 years, female 532.6
FF:10159-103A6 76 years, female 307.9

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

20.0
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 20.0
Samples: 4

Max nTPM: 25.6
Min nTPM: 15.6
Sample A Female 25.6
Sample B Female 22.7
Sample C Male 15.6
Sample D Male 16.0
Ventral spinal cord
nTPM: 18.8
Samples: 4

Max nTPM: 23.8
Min nTPM: 13.1
Sample A Female 23.8
Sample B Female 21.6
Sample C Male 13.1
Sample D Male 16.6

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