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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:25.3 nTPM
HPA Brain:187.2 nTPM
GTEx:25.3 nTPM
FANTOM5:704.6 Scaled Tags Per Million
Pig:153.4 nTPM
Mouse:1.8 nTPM
Allen mouse:0.1 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA003563Antibody HPA020432Antibody CAB004209
Glial cells Not detectedNot detectedNot detected
Neuronal cells Not detectedLowNot detected





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

187.2
Sample id Sample description nTPM
Caudate nucleus
nTPM: 119.2
2289 Male, age 61, right hemisphere 165.3
1854 Male, age 80, left hemisphere 146.9
1857 Female, age 85, left hemisphere 145.8
2846 Female, age 79, unknown 131.1
2481 Female, age 94, left hemisphere 111.4
1781 Male, age 74, unknown 100.6
2290 Female, age 72, unknown 86.0
2288 Male, age 75, left hemisphere 66.7
Globus pallidus, externus
nTPM: 183.5
1996 Male, age 80, right hemisphere 237.1
2395 Male, age 75, both hemispheres 218.8
2567 Female, age 72, unknown 193.1
2772 Female, age 79, unknown 173.3
2646 Male, age 61, right hemisphere 95.4
Globus pallidus, internus
nTPM: 187.2
2037 Male, age 80, right hemisphere 253.3
2566 Female, age 72, unknown 241.6
1818 Male, age 74, unknown 214.8
2111 Female, age 85, right hemisphere 186.9
2778 Female, age 91, both hemispheres 174.3
2287 Male, age 75, right hemisphere 135.4
2483 Female, age 94, right hemisphere 104.4
Nucleus accumbens
nTPM: 101.7
2698 Female, age 72, unknown 152.6
2732 Male, age 80, right hemisphere 144.3
2391 Female, age 94, left hemisphere 110.2
1806 Female, age 85, left hemisphere 105.9
1856 Female, age 91, right hemisphere 97.0
1783 Male, age 74, unknown 88.5
2286 Male, age 75, left hemisphere 71.0
2824 Male, age 61, right hemisphere 43.9
Nucleus basalis of Meynert
nTPM: 113.5
2393 Male, age 80, right hemisphere 129.3
2821 Male, age 75, both hemispheres 116.9
2484 Female, age 94, left hemisphere 107.8
2569 Male, age 61, both hemispheres 100.0
Nucleus of the diagonal band
nTPM: 85.6
1812 Female, age 91, both hemispheres 110.0
1979 Male, age 74, unknown 91.5
2775 Male, age 80, right hemisphere 82.2
2029 Male, age 61, right hemisphere 74.0
2195 Female, age 85, both hemispheres 70.0
Putamen
nTPM: 110.9
2482 Female, age 94, left hemisphere 170.0
2489 Female, age 72, unknown 142.2
1829 Male, age 74, unknown 124.8
1937 Female, age 91, right hemisphere 112.2
1838 Male, age 80, right hemisphere 83.4
2466 Female, age 79, unknown 79.9
2647 Male, age 75, left hemisphere 64.0
Septal nuclei
nTPM: 115.5
2394 Male, age 61, left hemisphere 190.5
2199 Male, age 80, right hemisphere 152.3
2629 Female, age 94, right hemisphere 116.2
2009 Female, age 91, both hemispheres 100.8
2059 Female, age 85, both hemispheres 97.6
2031 Female, age 72, unknown 80.1
1960 Male, age 74, unknown 70.9
Stria terminalis, bed nucleus
nTPM: 85.4
2201 Male, age 74, unknown 100.2
1974 Female, age 91, both hemispheres 90.0
2486 Female, age 94, both hemispheres 66.1

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

25.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 25.3
Samples: 246

Max nTPM: 173.4
Min nTPM: 1.0
Std nTPM: 25.2
Median nTPM: 16.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 173.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 127.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 109.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 109.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 99.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 96.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 92.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 89.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 88.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 87.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 80.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 79.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 76.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 75.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 73.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 72.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 70.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 68.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 65.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 64.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 64.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 64.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 63.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 62.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 62.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 61.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 61.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 58.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 58.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 57.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 57.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 54.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 54.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 51.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 50.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 50.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 47.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 46.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 46.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 46.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 46.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 44.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 43.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 42.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 41.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 41.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 40.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 40.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 40.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 40.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 39.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 37.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 37.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 36.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 35.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 35.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 35.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 34.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 34.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 34.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 33.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 33.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 32.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 32.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 32.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 31.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 30.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 30.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 30.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 29.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 29.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 29.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 29.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 28.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 28.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 27.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 26.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 26.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 25.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 24.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 24.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 24.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 24.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 23.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 23.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 22.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 22.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 22.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 22.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 21.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 21.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 21.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 21.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 20.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 20.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 19.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 19.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 19.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 19.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 19.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 19.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 19.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 19.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 19.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 18.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 18.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 18.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 18.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 18.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 18.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 17.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 17.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 17.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 17.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 17.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 17.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 17.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 17.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 16.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 16.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 16.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 16.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 16.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 16.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 15.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 15.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 15.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 15.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 15.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 15.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 15.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 15.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 15.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 15.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 14.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 14.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 14.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 14.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 13.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 13.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 13.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 13.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 13.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 13.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 13.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 13.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 12.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 12.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 12.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 12.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 12.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 12.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 12.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 12.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 11.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 11.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 11.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 11.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 11.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 11.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 11.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 11.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 11.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 11.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 11.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 10.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 10.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 10.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 10.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 10.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 10.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 10.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 10.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 9.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 9.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 9.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 9.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 9.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 9.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 9.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 8.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 8.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 8.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 8.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 8.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 8.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 8.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 8.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 8.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 8.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 8.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 8.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 8.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 7.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 7.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 7.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 7.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 7.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 7.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 7.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 7.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 7.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 7.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 6.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 6.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 6.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 6.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 6.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 6.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 6.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 6.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 6.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 6.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 6.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 5.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 5.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 5.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 5.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 5.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 5.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 5.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 5.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 5.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 5.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 4.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 4.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 4.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 4.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 4.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 4.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 4.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 3.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 3.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 3.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 3.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 3.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 3.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 3.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 2.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 2.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 2.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 2.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 2.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 1.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 1.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 1.0
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 17.7
Samples: 246

Max nTPM: 201.2
Min nTPM: 0.9
Std nTPM: 21.4
Median nTPM: 10.2
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 201.2
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 94.0
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 89.1
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 81.8
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 79.9
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 74.7
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 72.8
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 72.6
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 68.9
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 67.8
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 66.9
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 64.8
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 64.3
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 62.1
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 58.9
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 58.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 57.8
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 57.7
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 55.3
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 51.7
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 51.5
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 44.3
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 44.2
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 44.0
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 42.3
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 38.1
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 37.9
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 37.5
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 35.6
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 34.2
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 34.1
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 34.1
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 33.0
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 31.3
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 30.8
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 30.4
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 30.3
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 30.3
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 30.2
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 30.1
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 29.8
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 29.4
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 28.8
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 28.0
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 27.8
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 26.6
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 25.7
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 25.7
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 25.6
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 25.5
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 25.4
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 25.4
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 25.4
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 25.3
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 25.2
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 24.9
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 24.5
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 23.4
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 23.1
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 22.9
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 21.2
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 20.8
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 20.7
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 20.4
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 20.0
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 20.0
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 18.9
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 18.3
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 17.3
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 17.3
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 17.2
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 17.2
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 17.2
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 16.9
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 16.9
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 16.1
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 16.1
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 15.9
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 15.9
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 15.6
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 15.2
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 15.2
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 14.9
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 14.9
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 14.8
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 14.3
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 14.2
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 13.9
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 13.8
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 13.8
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 13.7
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 13.3
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 13.2
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 13.0
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 13.0
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 13.0
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 12.7
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 12.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 12.2
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 12.2
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 12.0
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 11.9
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 11.9
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 11.8
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 11.8
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 11.8
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 11.7
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 11.6
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 11.5
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 11.5
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 11.5
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 11.1
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 11.1
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 11.0
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 10.9
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 10.9
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 10.6
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 10.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 10.4
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 10.4
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 10.4
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 10.4
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 10.2
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 10.2
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 10.1
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 10.0
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 9.9
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 9.9
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 9.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 9.8
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 9.8
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 9.7
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 9.7
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 9.7
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 9.7
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 9.3
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 9.1
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 9.1
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 9.1
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 9.1
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 9.0
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 9.0
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 8.8
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 8.7
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 8.6
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 8.6
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 8.5
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 8.3
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 8.2
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 8.1
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 7.9
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 7.9
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 7.9
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 7.9
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 7.9
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 7.8
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 7.6
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 7.6
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 7.6
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 7.6
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 7.4
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 7.3
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 7.3
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 7.2
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 7.1
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 6.9
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 6.9
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 6.7
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 6.7
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 6.7
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 6.6
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 6.6
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 6.5
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 6.5
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 6.4
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 6.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 6.3
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 6.1
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 6.1
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 5.9
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 5.8
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 5.8
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 5.5
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 5.5
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 5.4
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 5.4
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 5.4
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 5.3
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 5.3
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 5.2
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 5.2
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 5.1
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 5.0
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 5.0
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 4.9
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 4.8
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 4.7
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 4.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 4.7
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 4.6
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 4.5
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 4.5
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 4.4
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 4.3
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 4.2
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 4.1
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 4.1
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 4.1
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 4.0
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 4.0
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 4.0
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 4.0
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 3.9
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 3.9
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 3.9
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 3.9
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 3.7
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 3.6
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 3.6
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 3.5
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 3.5
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 3.4
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 3.3
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 3.3
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 3.2
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 3.2
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 3.1
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 3.1
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 3.0
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 3.0
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 2.9
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 2.9
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 2.8
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 2.7
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 2.5
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 2.2
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 2.2
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 2.2
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 2.0
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 1.9
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 1.8
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 1.7
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 1.6
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 1.1
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 1.0
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 0.9
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Brain - Putamen (basal ganglia)
Average nTPM: 17.5
Samples: 205

Max nTPM: 88.9
Min nTPM: 0.9
Std nTPM: 16.1
Median nTPM: 11.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 88.9
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 85.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 75.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 70.3
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 69.7
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 62.9
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 59.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 57.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 57.0
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 54.9
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 54.1
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 53.5
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 49.4
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 49.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 43.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 43.3
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 43.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 42.7
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 42.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 39.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 38.6
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 37.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 37.3
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 36.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 36.0
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 35.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 35.3
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 35.1
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 34.5
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 33.1
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 31.9
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 31.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 30.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 29.4
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 29.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 28.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 28.1
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 27.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 27.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 26.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 26.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 26.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 26.2
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 24.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 24.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 24.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 23.9
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 23.3
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 22.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 22.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 22.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 22.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 21.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 21.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 21.4
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 21.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 20.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 19.2
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 19.1
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 19.1
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 18.9
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 18.9
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 18.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 18.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 18.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 18.4
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 18.3
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 17.9
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 17.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 17.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 17.6
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 17.1
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 16.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 16.7
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 16.0
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 15.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 14.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 14.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 14.6
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 14.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 14.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 14.4
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 14.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 14.2
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 13.9
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 13.8
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 13.7
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 13.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 13.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 13.4
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 13.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 12.9
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 12.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 12.6
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 12.5
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 12.4
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 12.3
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 12.3
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 12.1
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 11.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 11.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 11.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 11.6
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 11.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 11.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 11.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 11.1
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 10.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 10.9
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 10.8
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 10.7
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 10.7
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 10.7
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 10.7
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 10.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 10.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 10.2
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 10.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 10.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 9.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 9.8
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 9.7
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 9.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 9.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 9.6
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 9.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 9.5
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 9.5
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 9.3
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 9.3
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 9.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 9.3
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 9.2
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 8.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 8.9
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 8.9
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 8.9
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 8.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 8.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 8.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 8.6
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 8.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 8.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 8.2
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 8.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 8.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 8.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 8.1
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 8.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 8.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 8.0
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 7.9
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 7.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 7.9
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 7.8
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 7.6
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 7.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 7.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 7.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 6.8
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 6.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 6.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 6.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 6.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 6.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 6.1
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 5.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 5.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 5.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 5.7
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 5.5
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 5.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 5.3
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 5.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 5.1
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 4.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 4.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 4.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 4.6
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 4.3
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 4.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 4.2
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 4.1
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 4.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 3.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 3.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 3.8
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 3.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 3.6
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 3.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 3.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 3.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 3.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 2.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 2.7
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 2.6
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 2.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 2.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 2.2
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 2.0
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 1.8
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 1.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 1.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 1.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 0.9
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

704.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 351.7
FF:10164-103B2 76 years, female 351.7
Nucleus accumbens
Scaled Tags Per Million: 239.0
FF:10037-101F1 23-56 years, mixed 239.0
Putamen
Scaled Tags Per Million: 176.9
FF:10176-103C5 60 years, female 176.9
Globus pallidus
Scaled Tags Per Million: 704.6
FF:10161-103A8 76 years, female 1114.1
FF:10175-103C4 60 years, female 295.0

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

153.4
Pig sample Sample description nTPM
Caudate
nTPM: 70.8
Samples: 4

Max nTPM: 78.9
Min nTPM: 59.8
Sample A Female 75.5
Sample B Female 78.9
Sample C Male 69.1
Sample D Male 59.8
Putamen
nTPM: 94.9
Samples: 4

Max nTPM: 151.4
Min nTPM: 65.8
Sample A Female 151.4
Sample B Female 79.5
Sample C Male 65.8
Sample D Male 82.9
Septum
nTPM: 153.3
Samples: 4

Max nTPM: 216.0
Min nTPM: 111.7
Sample A Female 147.6
Sample B Female 111.7
Sample C Male 216.0
Sample D Male 138.0
Ventral pallidum
nTPM: 94.2
Samples: 4

Max nTPM: 115.0
Min nTPM: 67.4
Sample A Female 67.4
Sample B Female 101.7
Sample C Male 115.0
Sample D Male 92.8

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1.8
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 0.5
Samples: 4

Max nTPM: 0.9
Min nTPM: 0.0
Sample A Male 0.9
Sample B Male 0.2
Sample C Female 0.0
Sample D Female 0.7
Septum
nTPM: 1.8
Samples: 4

Max nTPM: 2.3
Min nTPM: 1.2
Sample A Male 1.2
Sample B Male 2.0
Sample C Female 2.3
Sample D Female 1.7
Ventral forebrain
nTPM: 0.5
Samples: 4

Max nTPM: 0.6
Min nTPM: 0.4
Sample A Male 0.4
Sample B Male 0.4
Sample C Female 0.6
Sample D Female 0.5

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.1
70528425 Antisense, RP_050623_02_E10, Mouse strain C57BL/6J (56 days, male) 0.1
Pallidum
Expression energy: 0.1
70528425 Antisense, RP_050623_02_E10, Mouse strain C57BL/6J (56 days, male) 0.1

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