PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:417.2 nTPM
FANTOM5:590.6 Scaled Tags Per Million
Pig:195.4 nTPM
Mouse:2.9 nTPM
Allen mouse:0.3 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 417.2
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 209.1
2090 Male, age 80, both hemispheres 276.1
2188 Female, age 91, both hemispheres 224.9
2301 Female, age 85, both hemispheres 205.9
1984 Male, age 76, both hemispheres 129.5
Area postrema
nTPM: 406.1
2799 Male, age 61, both hemispheres 757.9
2306 Male, age 80, both hemispheres 257.9
2054 Male, age 76, both hemispheres 202.6
Dorsal cochlear nucleus
nTPM: 199.1
2378 Male, age 80, both hemispheres 255.9
2187 Female, age 91, both hemispheres 211.1
2370 Male, age 61, both hemispheres 199.2
2802 Male, age 74, right hemisphere 174.0
2058 Male, age 76, both hemispheres 155.1
Dorsal medullary reticular nucleus
nTPM: 171.5
2373 Male, age 61, both hemispheres 180.2
2088 Male, age 76, both hemispheres 174.6
2040 Female, age 85, both hemispheres 159.6
Dorsal motor vagal complex
nTPM: 225.4
2807 Female, age 85, both hemispheres 434.1
2643 Male, age 74, both hemispheres 330.7
2813 Female, age 72, unknown 272.6
2185 Male, age 76, both hemispheres 214.0
2000 Male, age 74, unknown 171.6
2133 Female, age 91, both hemispheres 165.8
2844 Male, age 55, unknown 123.7
2797 Male, age 61, both hemispheres 90.5
Dorsal tegmental nucleus
nTPM: 290.8
2358 Male, age 61, both hemispheres 635.6
1936 Male, age 76, left hemisphere 190.1
2326 Male, age 74, both hemispheres 183.9
2083 Male, age 80, both hemispheres 153.6
Dorsolateral tegmental area
nTPM: 278.0
2337 Male, age 61, both hemispheres 754.2
2360 Male, age 74, both hemispheres 186.8
2654 Male, age 80, both hemispheres 175.7
2141 Male, age 76, both hemispheres 163.1
2751 Female, age 85, both hemispheres 110.3
Gigantocellular reticular nuclei, medullary
nTPM: 146.2
2310 Male, age 80, both hemispheres 179.1
2462 Male, age 74, both hemispheres 160.1
2314 Male, age 61, both hemispheres 143.6
2022 Male, age 76, right hemisphere 143.1
2387 Female, age 91, both hemispheres 126.3
1876 Female, age 85, both hemispheres 125.2
Gigantocellular reticular nuclei, pars
nTPM: 166.9
2706 Male, age 80, both hemispheres 209.1
2330 Male, age 80, both hemispheres 202.3
2336 Male, age 61, both hemispheres 151.2
2084 Female, age 85, both hemispheres 139.0
2168 Male, age 76, both hemispheres 133.1
Inferior olive
nTPM: 256.2
2178 Male, age 61, both hemispheres 289.5
2628 Female, age 91, both hemispheres 288.5
2379 Male, age 80, both hemispheres 265.9
2085 Female, age 85, both hemispheres 219.3
2563 Male, age 74, both hemispheres 217.6
Kolliker-Fuse nucleus
nTPM: 204.1
2315 Male, age 76, right hemisphere 253.0
2793 Female, age 91, left hemisphere 196.6
2163 Male, age 80, both hemispheres 162.7
Lateral lemniscal nuclei
nTPM: 131.5
2746 Female, age 85, left hemisphere 146.3
2320 Female, age 91, left hemisphere 135.2
2169 Male, age 76, both hemispheres 132.3
2036 Male, age 80, both hemispheres 123.6
2453 Male, age 74, right hemisphere 120.2
Lateral medullary reticular nucleus
nTPM: 266.6
2852 Male, age 80, both hemispheres 307.3
2374 Male, age 61, both hemispheres 306.7
2305 Male, age 74, both hemispheres 280.8
2804 Female, age 91, both hemispheres 261.5
2190 Female, age 85, both hemispheres 249.6
2044 Male, age 76, both hemispheres 193.5
Lateral parabrachial nucleus
nTPM: 248.1
2792 Male, age 76, both hemispheres 313.3
2790 Male, age 61, both hemispheres 256.1
2013 Male, age 80, both hemispheres 246.4
2139 Female, age 85, right hemisphere 176.5
Lateral vestibular nucleus
nTPM: 200.4
2311 Male, age 80, both hemispheres 268.8
2184 Male, age 76, both hemispheres 132.0
Locus coeruleus
nTPM: 149.5
2162 Male, age 80, both hemispheres 168.1
2123 Female, age 91, both hemispheres 165.9
2317 Female, age 72, unknown 163.6
2720 Male, age 74, both hemispheres 155.2
2788 Male, age 74, unknown 151.9
1980 Male, age 76, both hemispheres 137.0
2014 Male, age 55, unknown 105.0
Medial olivary nucleus
nTPM: 354.2
1943 Male, age 61, both hemispheres 534.0
2851 Male, age 80, both hemispheres 352.5
1962 Male, age 76, both hemispheres 304.3
2138 Female, age 91, both hemispheres 226.0
Medial parabrachial nucleus
nTPM: 178.8
2854 Male, age 80, both hemispheres 239.6
2156 Male, age 61, both hemispheres 224.1
2786 Male, age 76, both hemispheres 166.4
2170 Female, age 91, both hemispheres 163.9
2463 Female, age 85, right hemisphere 100.0
Medial periolivary nuclei
nTPM: 169.8
2081 Male, age 80, both hemispheres 235.7
2458 Female, age 91, both hemispheres 177.4
2791 Male, age 74, right hemisphere 177.4
2063 Male, age 76, both hemispheres 150.5
2171 Female, age 85, both hemispheres 108.0
Medial vestibular nucleus
nTPM: 169.6
2624 Male, age 61, both hemispheres 271.1
2801 Male, age 74, both hemispheres 170.4
2743 Female, age 85, both hemispheres 167.1
2134 Male, age 76, both hemispheres 154.0
2093 Male, age 80, both hemispheres 141.9
2803 Female, age 91, both hemispheres 112.9
Motor facial nucleus
nTPM: 163.6
2126 Male, age 61, both hemispheres 243.5
2697 Female, age 85, both hemispheres 205.1
2365 Male, age 74, right hemisphere 186.3
2062 Male, age 76, both hemispheres 127.0
2795 Female, age 91, both hemispheres 122.9
2327 Male, age 80, both hemispheres 96.5
Motor hypoglossal nucleus
nTPM: 177.8
2182 Male, age 80, both hemispheres 286.7
2132 Female, age 85, both hemispheres 184.5
2277 Male, age 76, both hemispheres 173.5
2461 Male, age 61, both hemispheres 152.1
2125 Female, age 91, both hemispheres 92.0
Motor trigeminal nucleus
nTPM: 197.4
2335 Male, age 61, both hemispheres 326.2
2321 Female, age 91, both hemispheres 184.1
2560 Male, age 74, both hemispheres 166.4
2309 Male, age 76, both hemispheres 157.4
2079 Male, age 80, both hemispheres 152.8
Nuclei of the trapezoid body
nTPM: 129.0
2166 Male, age 80, both hemispheres 160.8
1983 Male, age 76, both hemispheres 160.0
2368 Female, age 91, both hemispheres 117.7
2159 Male, age 61, both hemispheres 108.1
2735 Female, age 85, both hemispheres 98.6
Nucleus ambiguus
nTPM: 217.1
2071 Male, age 76, both hemispheres 261.3
2096 Female, age 85, both hemispheres 172.8
Nucleus cuneatus
nTPM: 227.6
2808 Female, age 85, both hemispheres 391.3
2564 Male, age 74, both hemispheres 279.3
2380 Male, age 80, both hemispheres 251.9
2381 Male, age 80, both hemispheres 223.4
2100 Male, age 76, both hemispheres 201.8
2376 Male, age 61, both hemispheres 194.7
2131 Male, age 76, both hemispheres 189.7
2805 Female, age 91, both hemispheres 187.0
2562 Male, age 61, both hemispheres 129.5
Nucleus gracilis
nTPM: 299.3
2299 Female, age 85, both hemispheres 331.1
2627 Male, age 74, both hemispheres 317.6
2382 Male, age 80, both hemispheres 249.3
Nucleus raphe magnus
nTPM: 146.3
2051 Male, age 76, both hemispheres 282.7
2459 Female, age 91, both hemispheres 135.9
2328 Male, age 80, both hemispheres 135.0
2455 Male, age 74, both hemispheres 120.8
2172 Female, age 85, both hemispheres 112.5
2160 Male, age 61, both hemispheres 90.5
Nucleus raphe obscurus
nTPM: 224.4
2142 Male, age 76, midline 250.7
2845 Female, age 85, midline 212.5
2800 Male, age 61, midline 210.1
Nucleus raphe pallidus
nTPM: 417.2
1924 Male, age 61, midline 766.8
2145 Male, age 76, midline 250.7
2183 Male, age 80, midline 234.1
Nucleus tractus solitarii
nTPM: 236.8
2191 Female, age 85, both hemispheres 367.6
2307 Male, age 80, both hemispheres 264.1
2656 Male, age 76, both hemispheres 161.5
2144 Female, age 91, right hemisphere 154.1
Paramedian reticular nucleus
nTPM: 155.2
2052 Male, age 76, both hemispheres 193.6
2313 Male, age 61, both hemispheres 150.5
2057 Male, age 80, both hemispheres 147.8
2050 Female, age 85, both hemispheres 128.8
Parvicellular reticular nuclei
nTPM: 172.0
2119 Male, age 80, both hemispheres 193.2
2095 Male, age 76, both hemispheres 176.7
2558 Male, age 74, both hemispheres 146.0
Parvicellular reticular nuclei, medullary
nTPM: 158.7
2091 Female, age 85, both hemispheres 181.2
2181 Male, age 80, left hemisphere 156.7
2189 Female, age 91, both hemispheres 138.3
Pedunculopontine tegmental nucleus
nTPM: 319.2
2338 Male, age 61, both hemispheres 691.4
2334 Male, age 80, both hemispheres 161.3
1921 Female, age 85, both hemispheres 104.8
Peritrigeminal nucleus
nTPM: 275.4
2067 Female, age 85, both hemispheres 332.6
2179 Male, age 61, both hemispheres 270.4
2136 Male, age 76, both hemispheres 223.1
Pontine nuclei
nTPM: 147.4
2115 Male, age 80, left hemisphere 264.3
2319 Female, age 91, both hemispheres 180.7
2109 Female, age 72, unknown 168.2
1968 Male, age 76, left hemisphere 142.4
2787 Female, age 85, both hemispheres 120.3
1863 Male, age 55, unknown 117.0
2454 Male, age 74, left hemisphere 96.9
2727 Male, age 61, right hemisphere 89.3
Pontine raphe nucleus
nTPM: 137.6
2853 Male, age 76, midline 166.5
2122 Female, age 85, midline 108.6
Posteroventral cochlear nucleus
nTPM: 216.1
2341 Male, age 80, both hemispheres 294.7
2135 Female, age 91, both hemispheres 276.2
2371 Male, age 61, both hemispheres 210.2
2070 Male, age 76, both hemispheres 178.9
2752 Female, age 85, both hemispheres 120.4
Prepositus hypoglossal nucleus
nTPM: 204.0
2086 Male, age 80, both hemispheres 244.2
2855 Female, age 85, right hemisphere 163.8
Principal sensory trigeminal nucleus
nTPM: 148.3
2367 Female, age 91, left hemisphere 175.4
2324 Male, age 76, both hemispheres 168.0
2008 Male, age 80, left hemisphere 132.9
2158 Male, age 61, both hemispheres 117.1
Reticular pontine nucleus, caudal
nTPM: 144.5
2092 Male, age 76, both hemispheres 200.2
2559 Male, age 74, both hemispheres 148.1
2457 Female, age 91, both hemispheres 137.0
2332 Male, age 80, right hemisphere 92.8
Reticular pontine nucleus, oral
nTPM: 129.0
2167 Male, age 76, both hemispheres 155.2
1939 Male, age 80, both hemispheres 150.8
2366 Female, age 91, both hemispheres 119.3
2361 Male, age 74, both hemispheres 114.6
2012 Female, age 85, both hemispheres 105.0
Reticulotegmental nucleus
nTPM: 149.5
2333 Male, age 80, both hemispheres 175.0
2322 Female, age 91, both hemispheres 145.9
2452 Male, age 74, both hemispheres 142.4
2325 Male, age 76, both hemispheres 134.9
Spinal trigeminal nucleus, caudal
nTPM: 224.5
2642 Male, age 74, both hemispheres 326.1
2312 Male, age 61, both hemispheres 262.8
2308 Male, age 80, both hemispheres 216.1
2447 Male, age 76, both hemispheres 168.6
2390 Female, age 91, both hemispheres 149.1
Spinal trigeminal nucleus, interpolar
nTPM: 190.5
2033 Male, age 80, both hemispheres 247.6
2386 Female, age 85, both hemispheres 232.3
2389 Female, age 91, both hemispheres 166.4
2625 Male, age 61, both hemispheres 162.2
2066 Male, age 76, right hemisphere 144.1
Spinal trigeminal nucleus, oral
nTPM: 155.2
2164 Male, age 80, both hemispheres 194.7
1978 Male, age 76, both hemispheres 159.3
2737 Female, age 85, both hemispheres 111.7
Spinal vestibular nucleus
nTPM: 159.7
2796 Male, age 61, both hemispheres 195.6
2780 Male, age 80, both hemispheres 182.1
2384 Male, age 74, both hemispheres 158.4
2806 Female, age 85, both hemispheres 153.8
2748 Male, age 76, both hemispheres 145.3
2186 Female, age 91, both hemispheres 122.6
Subcoeruleus area
nTPM: 151.4
2451 Male, age 74, both hemispheres 170.2
2089 Male, age 76, left hemisphere 165.1
1958 Male, age 80, both hemispheres 149.9
2323 Female, age 91, left hemisphere 142.3
2369 Female, age 85, left hemisphere 129.3
Superior olive
nTPM: 166.8
2020 Male, age 76, both hemispheres 207.7
2561 Female, age 91, both hemispheres 200.2
2364 Male, age 74, right hemisphere 182.8
2329 Male, age 80, right hemisphere 144.0
1875 Female, age 85, both hemispheres 99.4
Superior vestibular nucleus
nTPM: 204.3
2015 Male, age 80, both hemispheres 218.3
2061 Male, age 76, both hemispheres 200.8
2383 Male, age 74, both hemispheres 193.7
Ventral medullary reticular nucleus
nTPM: 152.3
2372 Male, age 61, both hemispheres 153.8
2060 Male, age 76, both hemispheres 150.7
Ventral periolivary nuclei
nTPM: 165.6
2023 Male, age 76, both hemispheres 200.3
2794 Female, age 91, left hemisphere 198.1
2165 Male, age 80, both hemispheres 136.7
2130 Female, age 85, both hemispheres 127.2
Ventrolateral medulla, A1-C1 cell groups
nTPM: 238.1
2118 Male, age 80, both hemispheres 269.2
2180 Male, age 61, both hemispheres 267.5
2302 Female, age 91, both hemispheres 237.8
2741 Female, age 85, both hemispheres 220.8
1986 Male, age 76, both hemispheres 195.3
Ventrolateral tegmental area, A5 NE cell group
nTPM: 203.1
2359 Male, age 61, both hemispheres 406.4
2161 Male, age 80, both hemispheres 196.2
1959 Male, age 76, both hemispheres 183.5
2840 Female, age 85, both hemispheres 171.3
2449 Male, age 74, both hemispheres 132.9
2456 Female, age 91, both hemispheres 128.0

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 590.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 548.1
FF:10165-103B3 76 years, female 609.8
FF:10182-103D2 60 years, female 486.4
Medulla oblongata
Scaled Tags Per Million: 590.6
FF:10155-103A2 76 years, female 789.6
FF:10038-101F2 18-64 years, mixed 692.7
FF:10174-103C3 60 years, female 289.5
Pons
Scaled Tags Per Million: 333.0
FF:10033-101E6 18-54 years, mixed 333.0

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 195.4
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 195.4
Samples: 4

Max nTPM: 255.1
Min nTPM: 138.3
Sample A Female 138.3
Sample B Female 176.1
Sample C Male 255.1
Sample D Male 212.0
Pons
nTPM: 172.4
Samples: 4

Max nTPM: 225.2
Min nTPM: 119.1
Sample A Female 119.1
Sample B Female 168.3
Sample C Male 225.2
Sample D Male 177.1

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 2.9
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 2.9
Samples: 4

Max nTPM: 3.9
Min nTPM: 2.0
Sample A Male 3.1
Sample B Male 2.6
Sample C Female 2.0
Sample D Female 3.9

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 0.3
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 0.3
70528425 Antisense, RP_050623_02_E10, Mouse strain C57BL/6J (56 days, male) 0.3
Pons
Expression energy: 0.1
70528425 Antisense, RP_050623_02_E10, Mouse strain C57BL/6J (56 days, male) 0.1

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