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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Neuronal projections: Medium
Synapses: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:249.0 nTPM
HPA Brain:198.3 nTPM
GTEx:249.0 nTPM
FANTOM5:741.5 Scaled Tags Per Million
Pig:184.6 nTPM
Mouse:102.4 nTPM
Allen mouse:5.9 Expression energy

CAUDATE - Extended tissue profilei

For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.

, antibody HPA004802
Glial cells Not detected
Neuronal cells Not detected
Neuronal projections Medium
Synapses Medium

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA004802
Glial cells Not detected
Neuronal cells High



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

198.3
Sample id Sample description nTPM
Caudate nucleus
nTPM: 99.0
1857 Female, age 85, left hemisphere 177.4
1854 Male, age 80, left hemisphere 144.0
2290 Female, age 72, unknown 119.8
2289 Male, age 61, right hemisphere 87.2
1781 Male, age 74, unknown 86.5
2288 Male, age 75, left hemisphere 75.0
2846 Female, age 79, unknown 66.8
2481 Female, age 94, left hemisphere 35.4
Globus pallidus, externus
nTPM: 10.2
2395 Male, age 75, both hemispheres 16.9
2646 Male, age 61, right hemisphere 15.6
2772 Female, age 79, unknown 6.4
2567 Female, age 72, unknown 6.2
1996 Male, age 80, right hemisphere 5.9
Globus pallidus, internus
nTPM: 7.8
2483 Female, age 94, right hemisphere 24.1
2287 Male, age 75, right hemisphere 8.1
2566 Female, age 72, unknown 7.2
2037 Male, age 80, right hemisphere 5.1
1818 Male, age 74, unknown 4.7
2778 Female, age 91, both hemispheres 3.7
2111 Female, age 85, right hemisphere 1.6
Nucleus accumbens
nTPM: 198.3
1856 Female, age 91, right hemisphere 548.0
2824 Male, age 61, right hemisphere 261.3
1806 Female, age 85, left hemisphere 209.0
1783 Male, age 74, unknown 185.9
2698 Female, age 72, unknown 168.9
2286 Male, age 75, left hemisphere 94.8
2732 Male, age 80, right hemisphere 85.7
2391 Female, age 94, left hemisphere 32.7
Nucleus basalis of Meynert
nTPM: 54.2
2393 Male, age 80, right hemisphere 89.1
2484 Female, age 94, left hemisphere 56.9
2821 Male, age 75, both hemispheres 49.9
2569 Male, age 61, both hemispheres 21.0
Nucleus of the diagonal band
nTPM: 51.4
1812 Female, age 91, both hemispheres 93.4
1979 Male, age 74, unknown 44.1
2195 Female, age 85, both hemispheres 42.9
2029 Male, age 61, right hemisphere 39.0
2775 Male, age 80, right hemisphere 37.8
Putamen
nTPM: 111.5
1937 Female, age 91, right hemisphere 326.7
1838 Male, age 80, right hemisphere 204.4
1829 Male, age 74, unknown 73.9
2466 Female, age 79, unknown 58.2
2482 Female, age 94, left hemisphere 41.5
2647 Male, age 75, left hemisphere 38.4
2489 Female, age 72, unknown 37.8
Septal nuclei
nTPM: 34.9
2009 Female, age 91, both hemispheres 54.6
1960 Male, age 74, unknown 51.7
2031 Female, age 72, unknown 45.1
2059 Female, age 85, both hemispheres 34.1
2394 Male, age 61, left hemisphere 27.5
2629 Female, age 94, right hemisphere 25.9
2199 Male, age 80, right hemisphere 5.2
Stria terminalis, bed nucleus
nTPM: 21.8
2486 Female, age 94, both hemispheres 37.3
2201 Male, age 74, unknown 16.4
1974 Female, age 91, both hemispheres 11.6

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

249.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 123.1
Samples: 246

Max nTPM: 366.4
Min nTPM: 2.9
Std nTPM: 84.4
Median nTPM: 109.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 366.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 357.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 333.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 329.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 329.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 320.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 317.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 311.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 307.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 299.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 297.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 295.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 290.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 288.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 284.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 283.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 276.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 272.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 262.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 261.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 251.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 251.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 250.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 247.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 245.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 240.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 238.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 231.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 230.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 228.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 228.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 226.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 222.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 220.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 219.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 218.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 215.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 212.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 210.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 208.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 208.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 204.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 202.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 201.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 200.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 200.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 199.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 199.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 197.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 197.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 196.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 196.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 195.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 191.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 190.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 190.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 189.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 186.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 184.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 183.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 182.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 182.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 179.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 178.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 177.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 177.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 177.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 176.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 175.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 173.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 172.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 166.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 166.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 163.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 162.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 162.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 160.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 160.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 159.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 159.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 154.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 153.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 150.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 148.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 148.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 147.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 143.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 143.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 141.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 141.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 139.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 139.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 137.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 136.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 136.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 136.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 136.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 135.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 134.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 131.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 129.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 129.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 127.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 127.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 126.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 126.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 125.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 125.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 125.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 120.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 120.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 118.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 117.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 117.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 115.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 113.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 113.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 111.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 111.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 111.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 111.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 110.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 109.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 109.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 107.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 105.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 104.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 101.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 100.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 100.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 100.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 100.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 100.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 100.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 99.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 98.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 96.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 94.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 94.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 94.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 92.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 92.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 91.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 91.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 89.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 89.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 87.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 87.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 86.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 86.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 85.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 84.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 82.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 82.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 79.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 77.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 76.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 76.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 72.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 72.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 70.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 69.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 68.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 67.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 66.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 66.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 66.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 66.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 66.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 65.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 64.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 62.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 61.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 60.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 59.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 58.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 56.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 55.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 55.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 55.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 54.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 54.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 52.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 52.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 52.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 52.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 50.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 48.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 48.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 47.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 47.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 44.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 44.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 44.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 42.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 42.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 41.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 40.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 40.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 39.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 39.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 38.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 37.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 35.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 35.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 35.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 35.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 34.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 33.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 32.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 31.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 31.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 31.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 31.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 29.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 28.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 28.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 27.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 27.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 26.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 26.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 24.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 24.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 24.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 24.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 23.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 23.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 23.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 22.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 20.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 20.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 18.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 17.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 17.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 15.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 14.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 14.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 13.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 13.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 12.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 9.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 9.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 9.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 8.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 7.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 2.9
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 249.0
Samples: 246

Max nTPM: 664.2
Min nTPM: 2.0
Std nTPM: 144.1
Median nTPM: 263.6
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 664.2
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 563.1
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 552.8
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 551.4
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 521.0
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 490.0
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 487.2
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 473.2
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 472.2
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 469.9
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 468.5
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 467.1
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 466.4
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 465.8
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 462.1
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 460.6
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 456.5
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 455.8
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 452.3
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 450.0
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 449.8
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 443.1
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 439.8
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 438.3
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 431.6
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 428.3
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 428.0
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 427.8
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 427.1
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 427.1
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 421.5
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 419.0
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 417.0
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 415.9
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 415.5
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 408.8
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 408.4
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 406.4
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 406.1
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 403.8
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 403.6
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 402.2
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 400.0
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 397.9
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 397.8
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 395.8
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 395.1
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 394.1
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 393.0
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 392.2
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 390.1
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 389.0
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 387.6
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 381.7
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 377.7
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 374.5
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 370.9
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 360.9
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 360.2
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 357.4
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 357.3
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 356.3
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 354.1
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 354.0
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 353.0
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 351.5
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 350.9
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 349.1
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 348.1
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 345.3
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 343.3
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 340.8
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 339.4
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 337.8
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 334.9
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 334.6
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 330.5
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 327.9
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 327.8
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 326.5
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 326.0
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 325.3
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 322.1
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 321.6
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 321.2
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 320.3
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 317.9
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 316.7
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 316.2
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 314.5
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 312.9
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 310.3
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 309.6
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 308.4
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 305.5
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 304.8
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 304.6
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 302.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 299.5
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 298.5
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 296.9
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 296.8
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 292.7
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 292.4
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 292.0
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 290.1
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 289.3
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 288.9
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 288.2
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 287.4
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 287.4
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 282.6
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 281.0
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 278.2
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 277.2
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 276.2
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 272.4
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 267.0
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 267.0
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 265.6
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 265.5
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 265.3
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 264.4
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 262.9
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 257.7
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 254.7
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 251.6
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 250.5
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 249.5
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 249.4
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 248.3
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 244.7
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 243.6
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 239.1
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 237.8
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 236.1
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 235.7
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 235.4
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 233.2
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 233.0
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 232.4
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 229.7
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 229.1
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 226.5
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 225.3
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 217.9
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 216.4
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 215.3
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 209.6
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 208.0
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 207.9
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 204.5
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 204.2
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 204.0
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 202.4
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 201.7
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 197.6
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 193.3
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 191.6
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 184.9
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 184.8
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 183.8
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 180.9
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 169.2
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 166.5
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 163.2
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 161.8
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 161.3
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 159.1
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 158.4
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 156.7
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 154.3
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 149.2
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 148.9
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 148.6
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 145.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 143.2
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 142.4
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 141.9
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 140.5
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 138.4
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 138.1
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 135.5
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 124.2
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 123.7
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 120.8
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 115.7
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 107.1
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 106.4
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 104.7
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 104.6
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 102.3
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 101.8
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 99.5
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 95.0
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 94.8
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 94.6
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 88.8
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 84.1
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 81.8
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 77.4
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 77.2
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 71.6
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 69.9
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 67.6
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 67.2
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 67.1
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 65.8
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 65.7
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 65.6
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 64.5
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 63.8
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 63.0
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 62.0
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 61.4
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 60.9
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 60.8
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 58.5
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 57.0
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 54.8
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 53.8
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 51.4
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 39.6
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 37.9
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 36.7
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 35.0
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 34.3
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 34.1
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 32.7
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 30.3
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 27.3
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 26.2
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 25.5
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 24.2
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 22.3
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 20.5
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 18.2
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 18.1
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 16.3
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 16.3
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 11.5
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 9.8
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 9.1
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 7.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 5.3
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 2.0
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Brain - Putamen (basal ganglia)
Average nTPM: 104.6
Samples: 205

Max nTPM: 427.4
Min nTPM: 4.7
Std nTPM: 82.5
Median nTPM: 85.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 427.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 331.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 328.8
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 325.3
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 319.0
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 289.9
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 288.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 287.1
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 284.9
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 282.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 265.8
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 260.5
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 258.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 258.2
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 257.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 248.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 241.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 233.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 230.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 218.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 216.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 212.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 210.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 206.2
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 206.1
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 203.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 202.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 201.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 199.6
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 198.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 196.8
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 194.5
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 193.1
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 189.9
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 188.1
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 187.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 185.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 183.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 182.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 180.5
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 180.4
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 178.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 171.6
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 171.4
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 167.9
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 165.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 164.2
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 162.6
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 156.9
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 156.2
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 151.9
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 150.5
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 149.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 147.1
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 144.3
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 143.7
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 142.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 141.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 141.5
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 136.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 135.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 134.1
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 133.9
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 131.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 131.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 131.5
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 131.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 130.9
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 130.4
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 130.3
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 129.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 125.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 124.3
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 122.3
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 120.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 119.1
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 115.7
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 114.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 114.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 110.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 107.0
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 105.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 103.2
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 101.1
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 100.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 100.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 99.7
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 98.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 98.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 97.7
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 97.0
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 96.1
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 95.4
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 95.0
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 94.4
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 93.3
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 92.9
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 92.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 91.8
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 90.5
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 87.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 85.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 85.2
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 81.8
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 80.7
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 78.2
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 78.0
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 77.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 77.6
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 77.6
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 77.6
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 77.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 76.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 76.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 73.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 73.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 71.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 71.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 69.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 68.6
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 63.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 61.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 60.9
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 60.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 58.1
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 57.3
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 56.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 56.0
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 56.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 53.9
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 53.2
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 53.2
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 50.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 48.8
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 47.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 46.9
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 46.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 46.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 44.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 44.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 44.3
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 43.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 42.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 41.2
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 41.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 39.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 39.5
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 39.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 36.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 36.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 35.7
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 35.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 34.8
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 34.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 34.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 32.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 31.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 31.7
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 31.7
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 31.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 31.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 31.1
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 31.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 30.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 30.8
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 30.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 29.9
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 28.7
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 28.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 26.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 26.4
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 26.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 25.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 24.8
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 24.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 24.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 24.3
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 23.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 23.6
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 22.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 22.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 21.8
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 21.6
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 21.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 20.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 20.2
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 20.1
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 19.5
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 19.3
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 18.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 18.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 18.5
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 17.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 16.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 14.8
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 12.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 12.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 9.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 9.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 8.3
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 7.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 6.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 5.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 4.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 4.7
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

741.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 515.9
FF:10164-103B2 76 years, female 515.9
Nucleus accumbens
Scaled Tags Per Million: 238.1
FF:10037-101F1 23-56 years, mixed 238.1
Putamen
Scaled Tags Per Million: 741.5
FF:10176-103C5 60 years, female 741.5
Globus pallidus
Scaled Tags Per Million: 64.0
FF:10175-103C4 60 years, female 108.2
FF:10161-103A8 76 years, female 19.7

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

184.6
Pig sample Sample description nTPM
Caudate
nTPM: 184.6
Samples: 4

Max nTPM: 222.1
Min nTPM: 153.8
Sample A Female 153.8
Sample B Female 180.2
Sample C Male 222.1
Sample D Male 182.4
Putamen
nTPM: 155.0
Samples: 4

Max nTPM: 238.0
Min nTPM: 41.8
Sample A Female 41.8
Sample B Female 165.2
Sample C Male 238.0
Sample D Male 175.0
Septum
nTPM: 77.8
Samples: 4

Max nTPM: 142.0
Min nTPM: 8.5
Sample A Female 136.3
Sample B Female 142.0
Sample C Male 8.5
Sample D Male 24.3
Ventral pallidum
nTPM: 119.4
Samples: 4

Max nTPM: 192.3
Min nTPM: 24.2
Sample A Female 140.3
Sample B Female 192.3
Sample C Male 24.2
Sample D Male 120.7

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

102.4
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 102.5
Samples: 4

Max nTPM: 114.3
Min nTPM: 83.9
Sample A Male 111.0
Sample B Male 114.3
Sample C Female 83.9
Sample D Female 100.6
Septum
nTPM: 38.8
Samples: 4

Max nTPM: 46.3
Min nTPM: 29.1
Sample A Male 45.2
Sample B Male 46.3
Sample C Female 34.6
Sample D Female 29.1
Ventral forebrain
nTPM: 89.6
Samples: 4

Max nTPM: 96.0
Min nTPM: 76.7
Sample A Male 90.4
Sample B Male 96.0
Sample C Female 95.1
Sample D Female 76.7

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

5.9
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 5.9
70927827 Antisense, RP_050725_01_B03, Mouse strain C57BL/6J (56 days, male) 7.4
413779 Antisense, RP_040809_01_C11, Mouse strain C57BL/6J (56 days, male) 4.3
Pallidum
Expression energy: 2.1
70927827 Antisense, RP_050725_01_B03, Mouse strain C57BL/6J (56 days, male) 2.2
413779 Antisense, RP_040809_01_C11, Mouse strain C57BL/6J (56 days, male) 2.1

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