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BANF2
HPA
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  • BANF2
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

BANF2
Synonyms BAF-L, BAF2, BAFL, C20orf179, dJ803K15.1
Gene descriptioni

Full gene name according to HGNC.

BANF family member 2
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 20
Cytoband p12.1
Chromosome location (bp) 17693672 - 17735871
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

4
Ensembl ENSG00000125888 (version 109)
Entrez gene 140836
HGNC HGNC:16172
UniProt Q9H503 (UniProt - Evidence at protein level)
neXtProt NX_Q9H503
GeneCards BANF2
Antibodypedia BANF2 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

May play a role in BANF1 regulation and influence tissue-specific roles of BANF1.... show less
Gene summary (Entrez)i

Useful information about the gene from Entrez

Enables identical protein binding activity. Predicted to be involved in chromosome condensation and chromosome segregation. Located in nucleus. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
BANF2-201
ENSP00000246090
ENST00000246090
Q9H503
[Direct mapping] Barrier-to-autointegration factor-like protein
Show all
A0A140VK85
[Target identity:100%; Query identity:100%] Testis secretory sperm-binding protein Li 212a
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0003677 [DNA binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0007059 [chromosome segregation]
GO:0030261 [chromosome condensation]
Show all
90 aa
10.3 kDa
No 0
BANF2-202
ENSP00000367036
ENST00000377805
Q9H503
[Direct mapping] Barrier-to-autointegration factor-like protein
Show all
A0A140VK85
[Target identity:100%; Query identity:100%] Testis secretory sperm-binding protein Li 212a
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0003677 [DNA binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0007059 [chromosome segregation]
GO:0030261 [chromosome condensation]
Show all
90 aa
10.3 kDa
No 0
BANF2-203
ENSP00000398738
ENST00000427254
B1AM15
[Direct mapping] Barrier-to-autointegration factor-like protein
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0003677 [DNA binding]
GO:0005634 [nucleus]
Show all
42 aa
4.7 kDa
No 0
BANF2-205
ENSP00000439128
ENST00000545418
Q9H503
[Direct mapping] Barrier-to-autointegration factor-like protein
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0003677 [DNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0007059 [chromosome segregation]
GO:0030261 [chromosome condensation]
GO:0042802 [identical protein binding]
Show all
97 aa
11.1 kDa
No 0

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