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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:95.7 nTPM
HPA Brain:61.2 nTPM
GTEx:95.7 nTPM
FANTOM5:61.0 Scaled Tags Per Million
Pig:71.0 nTPM
Mouse:231.0 nTPM
Allen mouse:11.9 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA015242Antibody HPA015968
Glial cells LowNot detected
Neuronal cells MediumMedium





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

61.2
Sample id Sample description nTPM
Caudate nucleus
nTPM: 57.9
2846 Female, age 79, unknown 64.3
2290 Female, age 72, unknown 60.7
1857 Female, age 85, left hemisphere 60.3
2288 Male, age 75, left hemisphere 60.1
1781 Male, age 74, unknown 55.9
2481 Female, age 94, left hemisphere 55.4
2289 Male, age 61, right hemisphere 54.2
1854 Male, age 80, left hemisphere 52.3
Globus pallidus, externus
nTPM: 61.2
2395 Male, age 75, both hemispheres 68.7
1996 Male, age 80, right hemisphere 68.2
2646 Male, age 61, right hemisphere 61.7
2772 Female, age 79, unknown 61.7
2567 Female, age 72, unknown 45.8
Globus pallidus, internus
nTPM: 60.5
2483 Female, age 94, right hemisphere 64.7
2037 Male, age 80, right hemisphere 62.4
2287 Male, age 75, right hemisphere 62.4
2566 Female, age 72, unknown 59.8
1818 Male, age 74, unknown 59.2
2778 Female, age 91, both hemispheres 58.0
2111 Female, age 85, right hemisphere 57.4
Nucleus accumbens
nTPM: 58.3
1856 Female, age 91, right hemisphere 64.0
2698 Female, age 72, unknown 62.8
2732 Male, age 80, right hemisphere 62.0
1806 Female, age 85, left hemisphere 60.8
1783 Male, age 74, unknown 59.5
2286 Male, age 75, left hemisphere 58.1
2391 Female, age 94, left hemisphere 53.1
2824 Male, age 61, right hemisphere 46.6
Nucleus basalis of Meynert
nTPM: 53.0
2569 Male, age 61, both hemispheres 58.4
2821 Male, age 75, both hemispheres 55.4
2393 Male, age 80, right hemisphere 49.8
2484 Female, age 94, left hemisphere 48.4
Nucleus of the diagonal band
nTPM: 53.4
1979 Male, age 74, unknown 58.9
1812 Female, age 91, both hemispheres 57.2
2775 Male, age 80, right hemisphere 57.0
2195 Female, age 85, both hemispheres 51.5
2029 Male, age 61, right hemisphere 42.4
Putamen
nTPM: 57.6
2647 Male, age 75, left hemisphere 63.6
2482 Female, age 94, left hemisphere 63.1
2466 Female, age 79, unknown 59.3
1937 Female, age 91, right hemisphere 59.0
2489 Female, age 72, unknown 57.4
1829 Male, age 74, unknown 51.0
1838 Male, age 80, right hemisphere 49.9
Septal nuclei
nTPM: 55.9
2629 Female, age 94, right hemisphere 62.9
2199 Male, age 80, right hemisphere 60.5
1960 Male, age 74, unknown 57.8
2009 Female, age 91, both hemispheres 57.3
2031 Female, age 72, unknown 53.6
2059 Female, age 85, both hemispheres 50.3
2394 Male, age 61, left hemisphere 49.0
Stria terminalis, bed nucleus
nTPM: 53.3
1974 Female, age 91, both hemispheres 55.4
2201 Male, age 74, unknown 54.2
2486 Female, age 94, both hemispheres 50.4

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

95.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 89.0
Samples: 246

Max nTPM: 145.2
Min nTPM: 54.1
Std nTPM: 16.2
Median nTPM: 87.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 145.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 136.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 133.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 132.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 129.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 128.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 128.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 127.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 125.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 123.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 122.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 122.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 122.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 121.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 118.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 116.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 116.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 113.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 113.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 112.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 111.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 111.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 111.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 110.5
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 109.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 109.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 109.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 109.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 109.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 108.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 107.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 106.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 106.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 106.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 105.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 105.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 104.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 104.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 104.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 103.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 103.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 103.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 102.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 102.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 102.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 102.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 102.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 101.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 101.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 101.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 100.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 100.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 100.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 100.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 100.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 100.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 100.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 100.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 99.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 99.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 99.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 99.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 98.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 98.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 98.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 97.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 97.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 97.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 97.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 96.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 96.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 96.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 96.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 96.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 95.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 95.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 95.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 95.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 95.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 95.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 95.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 95.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 94.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 94.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 94.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 94.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 93.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 93.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 92.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 92.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 91.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 91.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 91.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 91.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 91.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 91.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 91.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 91.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 91.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 91.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 90.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 90.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 89.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 89.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 89.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 89.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 88.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 88.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 88.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 88.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 88.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 88.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 88.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 87.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 87.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 87.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 87.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 87.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 87.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 87.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 87.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 87.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 87.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 86.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 86.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 86.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 86.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 86.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 86.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 86.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 85.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 85.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 85.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 85.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 85.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 85.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 85.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 84.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 84.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 83.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 83.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 83.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 83.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 83.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 83.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 83.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 83.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 83.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 82.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 82.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 82.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 82.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 82.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 82.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 82.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 81.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 81.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 81.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 81.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 81.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 81.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 81.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 81.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 80.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 80.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 80.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 80.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 80.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 80.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 80.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 80.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 80.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 80.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 80.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 80.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 79.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 79.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 79.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 79.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 79.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 79.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 79.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 79.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 78.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 78.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 77.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 77.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 77.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 76.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 76.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 76.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 75.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 75.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 75.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 75.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 74.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 74.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 74.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 74.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 74.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 74.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 74.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 73.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 73.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 72.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 72.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 72.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 72.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 72.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 72.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 72.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 72.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 72.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 71.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 71.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 71.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 71.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 71.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 71.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 71.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 71.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 71.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 70.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 70.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 70.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 69.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 69.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 69.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 68.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 68.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 67.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 67.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 66.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 66.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 66.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 65.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 65.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 65.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 64.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 64.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 61.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 58.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 57.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 55.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 55.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 54.1
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 95.7
Samples: 246

Max nTPM: 245.1
Min nTPM: 46.4
Std nTPM: 22.2
Median nTPM: 91.1
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 245.1
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 167.4
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 160.1
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 152.8
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 149.7
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 144.4
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 143.9
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 142.9
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 142.7
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 142.3
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 140.7
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 140.7
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 136.2
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 136.1
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 135.4
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 133.7
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 133.0
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 132.8
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 131.5
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 131.4
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 130.7
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 130.3
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 129.7
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 123.3
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 122.4
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 121.9
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 121.7
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 121.0
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 120.9
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 120.7
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 120.2
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 120.1
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 119.1
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 119.1
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 117.9
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 117.9
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 116.9
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 116.3
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 115.6
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 115.4
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 114.3
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 114.2
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 113.8
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 113.5
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 112.6
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 111.8
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 111.5
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 111.4
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 111.0
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 110.9
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 109.4
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 109.4
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 109.0
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 108.7
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 107.5
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 107.4
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 107.2
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 107.0
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 106.4
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 106.2
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 106.1
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 105.6
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 105.2
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 105.1
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 104.8
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 104.7
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 104.6
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 104.0
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 103.3
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 103.2
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 103.0
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 102.9
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 102.1
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 101.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 101.0
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 100.7
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 100.5
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 100.2
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 100.0
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 99.9
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 99.6
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 99.1
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 98.9
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 98.4
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 98.2
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 98.0
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 98.0
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 98.0
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 98.0
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 97.4
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 97.3
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 97.2
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 96.9
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 96.9
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 96.3
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 96.3
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 96.3
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 95.8
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 95.8
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 95.3
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 95.0
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 94.9
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 94.9
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 94.5
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 94.2
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 94.0
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 93.9
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 93.6
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 93.4
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 93.3
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 93.1
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 92.8
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 92.7
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 92.4
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 92.0
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 91.9
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 91.7
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 91.7
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 91.4
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 91.4
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 91.3
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 91.2
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 91.2
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 91.1
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 90.9
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 90.7
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 90.6
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 90.5
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 90.3
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 90.2
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 90.1
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 90.1
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 89.7
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 89.7
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 89.6
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 89.4
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 89.2
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 89.0
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 89.0
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 88.6
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 88.4
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 88.3
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 87.9
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 87.8
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 87.7
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 87.7
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 87.5
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 87.4
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 87.4
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 87.3
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 87.3
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 86.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 86.5
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 86.3
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 86.2
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 86.1
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 86.0
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 85.7
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 85.6
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 85.2
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 85.0
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 84.9
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 84.8
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 84.7
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 84.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 83.9
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 83.7
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 83.6
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 83.6
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 83.4
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 83.2
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 83.0
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 83.0
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 82.7
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 82.3
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 82.2
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 82.1
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 81.8
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 81.8
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 81.7
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 81.5
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 81.5
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 81.3
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 81.2
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 81.2
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 80.6
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 80.6
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 80.5
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 80.4
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 80.0
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 79.8
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 79.8
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 79.7
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 79.6
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 79.3
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 79.2
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 78.9
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 78.9
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 78.9
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 78.6
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 78.6
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 78.6
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 78.1
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 77.7
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 77.6
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 77.5
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 77.5
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 77.5
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 77.4
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 77.4
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 77.0
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 76.9
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 76.7
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 75.8
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 75.3
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 74.9
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 74.8
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 74.8
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 74.7
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 74.5
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 74.3
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 74.1
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 73.6
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 73.6
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 73.4
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 71.3
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 71.1
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 71.1
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 70.6
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 70.4
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 70.2
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 70.1
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 69.9
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 69.7
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 69.6
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 69.0
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 68.1
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 68.0
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 66.5
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 65.3
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 65.0
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 64.5
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 63.7
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 62.5
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 61.6
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 46.4
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Brain - Putamen (basal ganglia)
Average nTPM: 94.6
Samples: 205

Max nTPM: 154.4
Min nTPM: 61.5
Std nTPM: 17.6
Median nTPM: 91.5
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 154.4
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 153.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 152.1
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 151.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 136.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 134.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 133.5
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 132.6
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 128.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 127.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 127.3
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 126.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 126.7
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 123.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 122.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 121.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 120.4
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 120.0
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 119.8
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 118.9
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 118.0
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 117.9
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 117.3
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 117.3
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 117.1
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 117.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 115.9
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 114.4
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 112.9
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 112.8
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 111.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 110.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 110.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 110.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 109.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 109.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 109.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 109.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 108.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 108.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 107.8
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 107.6
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 106.0
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 105.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 105.9
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 105.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 105.6
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 104.8
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 104.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 104.3
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 104.0
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 104.0
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 103.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 103.5
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 103.1
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 102.9
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 102.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 102.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 102.3
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 101.8
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 101.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 101.7
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 101.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 101.3
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 100.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 100.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 100.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 99.6
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 99.3
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 99.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 98.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 98.6
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 98.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 98.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 97.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 97.9
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 97.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 97.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 96.6
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 96.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 96.1
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 95.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 95.6
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 95.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 95.0
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 95.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 94.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 94.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 94.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 94.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 94.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 93.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 93.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 93.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 92.9
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 92.6
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 92.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 92.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 92.1
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 92.0
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 91.9
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 91.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 91.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 91.2
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 90.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 90.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 90.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 90.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 90.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 90.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 90.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 90.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 89.8
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 89.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 89.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 89.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 89.4
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 89.2
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 89.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 88.8
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 88.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 88.6
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 88.5
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 88.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 88.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 87.8
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 87.7
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 87.6
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 87.6
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 87.4
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 86.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 86.6
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 86.5
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 86.4
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 86.2
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 86.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 86.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 85.7
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 85.5
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 85.4
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 85.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 85.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 85.0
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 84.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 84.8
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 84.6
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 84.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 84.0
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 83.9
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 83.4
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 83.3
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 83.1
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 83.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 83.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 83.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 82.9
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 82.7
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 82.6
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 82.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 81.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 81.0
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 80.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 80.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 80.4
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 80.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 80.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 79.9
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 79.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 79.6
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 79.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 78.8
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 77.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 77.6
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 77.6
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 76.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 76.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 76.3
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 75.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 75.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 75.0
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 74.9
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 74.5
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 74.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 74.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 74.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 73.7
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 73.5
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 73.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 72.5
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 71.8
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 71.7
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 71.4
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 70.4
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 70.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 69.5
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 69.2
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 68.6
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 68.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 68.2
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 68.1
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 67.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 66.8
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 66.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 64.2
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 61.5
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

61.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 46.2
FF:10164-103B2 76 years, female 46.2
Nucleus accumbens
Scaled Tags Per Million: 61.0
FF:10037-101F1 23-56 years, mixed 61.0
Putamen
Scaled Tags Per Million: 33.5
FF:10176-103C5 60 years, female 33.5
Globus pallidus
Scaled Tags Per Million: 36.8
FF:10175-103C4 60 years, female 39.2
FF:10161-103A8 76 years, female 34.4

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

71.0
Pig sample Sample description nTPM
Caudate
nTPM: 71.0
Samples: 4

Max nTPM: 82.7
Min nTPM: 62.2
Sample A Female 65.4
Sample B Female 73.5
Sample C Male 82.7
Sample D Male 62.2
Putamen
nTPM: 69.1
Samples: 4

Max nTPM: 78.4
Min nTPM: 55.6
Sample A Female 64.3
Sample B Female 55.6
Sample C Male 78.4
Sample D Male 78.1
Septum
nTPM: 69.2
Samples: 4

Max nTPM: 73.2
Min nTPM: 64.8
Sample A Female 67.1
Sample B Female 64.8
Sample C Male 71.8
Sample D Male 73.2
Ventral pallidum
nTPM: 64.6
Samples: 4

Max nTPM: 66.7
Min nTPM: 60.5
Sample A Female 60.5
Sample B Female 66.7
Sample C Male 64.6
Sample D Male 66.4

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

231.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 172.5
Samples: 4

Max nTPM: 177.7
Min nTPM: 160.4
Sample A Male 176.7
Sample B Male 177.7
Sample C Female 160.4
Sample D Female 175.0
Septum
nTPM: 231.0
Samples: 4

Max nTPM: 242.3
Min nTPM: 212.5
Sample A Male 236.4
Sample B Male 242.3
Sample C Female 232.9
Sample D Female 212.5
Ventral forebrain
nTPM: 193.8
Samples: 4

Max nTPM: 203.4
Min nTPM: 179.6
Sample A Male 189.8
Sample B Male 202.4
Sample C Female 203.4
Sample D Female 179.6

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

11.9
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 11.9
68920713 Antisense, RP_050303_01_A12, Mouse strain C57BL/6J (56 days, male) 11.9
Pallidum
Expression energy: 11.4
68920713 Antisense, RP_050303_01_A12, Mouse strain C57BL/6J (56 days, male) 11.4

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