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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:134.9 nTPM
HPA Brain:74.2 nTPM
GTEx:134.9 nTPM
FANTOM5:59.7 Scaled Tags Per Million
Pig:28.3 nTPM
Mouse:93.8 nTPM
Allen mouse:3.2 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA012782
Glial cells Medium
Neuronal cells High



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

74.2
Sample id Sample description nTPM
Caudate nucleus
nTPM: 60.7
2481 Female, age 94, left hemisphere 74.9
1781 Male, age 74, unknown 64.8
2290 Female, age 72, unknown 61.8
2846 Female, age 79, unknown 60.6
2289 Male, age 61, right hemisphere 57.5
2288 Male, age 75, left hemisphere 57.3
1857 Female, age 85, left hemisphere 56.0
1854 Male, age 80, left hemisphere 53.0
Globus pallidus, externus
nTPM: 74.2
1996 Male, age 80, right hemisphere 99.0
2772 Female, age 79, unknown 95.6
2646 Male, age 61, right hemisphere 62.6
2395 Male, age 75, both hemispheres 61.4
2567 Female, age 72, unknown 52.6
Globus pallidus, internus
nTPM: 72.8
2483 Female, age 94, right hemisphere 87.1
2287 Male, age 75, right hemisphere 83.6
2778 Female, age 91, both hemispheres 81.4
2037 Male, age 80, right hemisphere 72.2
1818 Male, age 74, unknown 66.2
2566 Female, age 72, unknown 62.0
2111 Female, age 85, right hemisphere 57.0
Nucleus accumbens
nTPM: 63.3
2286 Male, age 75, left hemisphere 68.9
1806 Female, age 85, left hemisphere 66.6
1783 Male, age 74, unknown 66.1
2824 Male, age 61, right hemisphere 63.7
2732 Male, age 80, right hemisphere 63.3
1856 Female, age 91, right hemisphere 62.8
2391 Female, age 94, left hemisphere 58.6
2698 Female, age 72, unknown 56.1
Nucleus basalis of Meynert
nTPM: 59.4
2569 Male, age 61, both hemispheres 66.8
2484 Female, age 94, left hemisphere 65.7
2821 Male, age 75, both hemispheres 57.5
2393 Male, age 80, right hemisphere 47.7
Nucleus of the diagonal band
nTPM: 57.3
1812 Female, age 91, both hemispheres 64.1
2775 Male, age 80, right hemisphere 63.3
1979 Male, age 74, unknown 55.3
2029 Male, age 61, right hemisphere 52.2
2195 Female, age 85, both hemispheres 51.8
Putamen
nTPM: 56.9
2482 Female, age 94, left hemisphere 73.1
1937 Female, age 91, right hemisphere 59.3
2647 Male, age 75, left hemisphere 58.9
2466 Female, age 79, unknown 57.2
1838 Male, age 80, right hemisphere 56.4
2489 Female, age 72, unknown 54.7
1829 Male, age 74, unknown 38.5
Septal nuclei
nTPM: 53.7
1960 Male, age 74, unknown 68.3
2031 Female, age 72, unknown 58.8
2199 Male, age 80, right hemisphere 55.1
2009 Female, age 91, both hemispheres 54.2
2059 Female, age 85, both hemispheres 53.7
2629 Female, age 94, right hemisphere 47.3
2394 Male, age 61, left hemisphere 38.8
Stria terminalis, bed nucleus
nTPM: 51.4
1974 Female, age 91, both hemispheres 59.2
2486 Female, age 94, both hemispheres 48.8
2201 Male, age 74, unknown 46.1

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

134.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 117.7
Samples: 246

Max nTPM: 406.7
Min nTPM: 46.8
Std nTPM: 41.1
Median nTPM: 110.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 406.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 319.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 315.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 268.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 234.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 232.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 226.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 219.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 207.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 197.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 193.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 190.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 181.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 178.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 178.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 176.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 172.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 168.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 165.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 165.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 165.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 154.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 153.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 153.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 153.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 150.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 149.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 148.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 148.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 147.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 145.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 145.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 144.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 143.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 143.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 141.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 141.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 140.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 139.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 139.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 139.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 139.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 139.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 138.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 136.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 136.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 136.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 135.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 135.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 135.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 135.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 134.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 134.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 133.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 133.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 132.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 132.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 132.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 130.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 130.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 130.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 129.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 129.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 129.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 129.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 129.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 129.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 129.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 128.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 128.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 128.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 127.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 126.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 126.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 126.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 126.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 125.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 125.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 125.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 124.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 123.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 123.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 123.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 122.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 122.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 122.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 122.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 122.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 121.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 121.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 121.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 119.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 119.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 119.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 118.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 118.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 117.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 117.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 117.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 117.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 117.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 116.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 116.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 115.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 115.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 115.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 115.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 114.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 114.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 114.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 113.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 113.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 113.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 113.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 113.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 113.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 112.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 112.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 112.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 111.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 111.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 111.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 111.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 110.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 110.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 110.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 110.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 109.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 109.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 108.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 108.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 108.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 108.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 108.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 108.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 107.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 107.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 107.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 107.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 107.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 106.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 106.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 106.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 106.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 106.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 105.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 105.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 105.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 105.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 105.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 105.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 104.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 104.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 103.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 103.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 102.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 102.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 101.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 101.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 101.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 101.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 100.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 100.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 100.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 100.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 99.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 99.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 99.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 99.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 98.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 98.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 97.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 97.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 96.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 96.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 96.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 96.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 95.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 95.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 94.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 94.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 94.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 93.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 93.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 92.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 92.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 92.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 92.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 92.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 92.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 92.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 92.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 91.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 91.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 91.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 91.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 91.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 90.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 90.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 90.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 90.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 89.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 88.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 88.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 88.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 87.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 87.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 87.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 85.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 85.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 85.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 85.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 84.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 84.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 83.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 83.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 82.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 81.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 81.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 80.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 80.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 80.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 80.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 79.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 79.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 79.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 79.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 78.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 78.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 77.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 76.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 76.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 75.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 75.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 74.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 73.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 72.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 71.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 69.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 68.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 68.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 66.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 56.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 53.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 52.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 46.8
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 129.4
Samples: 246

Max nTPM: 483.2
Min nTPM: 57.8
Std nTPM: 52.7
Median nTPM: 119.5
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 483.2
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 421.4
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 404.3
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 322.2
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 267.1
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 251.2
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 242.5
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 233.5
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 230.8
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 228.0
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 219.4
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 216.0
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 214.4
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 214.1
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 213.5
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 208.4
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 200.5
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 200.3
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 199.9
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 199.1
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 195.7
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 195.7
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 187.8
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 181.9
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 181.0
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 179.4
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 179.3
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 177.3
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 176.1
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 175.2
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 174.9
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 170.8
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 170.7
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 167.6
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 167.0
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 166.1
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 165.2
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 164.8
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 164.5
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 162.1
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 161.6
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 160.9
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 159.9
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 158.9
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 158.8
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 156.4
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 156.3
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 156.2
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 155.7
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 153.5
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 153.1
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 152.1
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 151.7
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 150.6
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 149.9
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 148.1
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 147.9
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 147.7
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 145.1
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 144.8
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 143.8
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 142.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 142.3
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 142.2
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 142.1
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 142.0
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 141.9
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 141.6
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 141.1
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 140.5
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 140.2
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 139.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 139.0
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 138.8
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 138.2
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 136.7
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 136.5
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 136.3
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 136.1
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 135.7
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 135.7
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 135.3
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 135.0
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 134.9
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 133.9
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 133.3
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 133.1
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 132.9
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 132.6
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 132.2
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 132.2
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 132.1
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 131.2
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 130.6
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 130.1
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 129.8
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 129.2
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 128.7
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 128.5
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 128.0
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 127.9
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 126.9
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 126.4
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 126.1
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 125.5
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 125.1
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 125.0
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 124.7
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 123.9
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 123.7
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 123.0
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 122.8
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 122.1
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 122.0
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 121.8
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 121.7
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 121.6
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 121.4
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 120.4
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 120.0
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 119.8
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 119.6
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 119.6
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 119.5
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 119.4
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 119.1
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 119.0
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 118.9
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 118.9
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 117.8
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 116.3
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 116.2
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 116.2
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 115.9
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 115.5
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 114.9
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 114.9
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 114.4
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 113.8
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 113.5
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 113.5
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 112.4
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 112.2
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 111.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 111.1
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 111.0
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 111.0
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 110.7
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 109.7
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 109.1
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 109.0
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 108.6
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 108.5
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 108.3
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 108.1
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 107.5
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 107.5
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 107.4
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 105.8
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 105.3
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 104.9
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 104.9
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 103.8
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 102.9
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 102.6
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 102.6
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 102.2
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 102.2
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 102.0
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 102.0
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 102.0
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 100.7
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 100.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 100.2
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 100.1
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 100.0
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 99.7
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 99.1
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 98.7
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 98.7
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 97.6
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 97.5
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 96.4
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 96.3
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 95.8
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 95.5
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 95.4
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 95.4
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 94.8
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 94.4
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 94.4
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 94.4
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 94.0
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 93.8
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 93.4
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 93.1
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 92.8
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 92.7
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 92.6
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 92.6
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 92.5
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 92.3
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 92.0
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 92.0
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 91.2
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 90.8
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 89.9
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 89.6
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 89.5
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 89.1
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 88.7
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 88.6
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 87.9
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 87.6
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 86.9
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 86.8
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 85.9
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 85.8
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 85.1
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 84.9
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 84.7
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 84.7
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 84.1
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 82.8
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 81.8
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 81.4
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 81.3
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 81.3
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 81.0
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 80.5
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 79.5
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 78.8
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 77.6
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 77.4
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 75.7
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 75.2
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 74.8
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 73.9
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 73.8
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 73.4
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 69.4
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 66.6
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 65.6
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 59.6
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 57.9
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 57.8
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 134.9
Samples: 205

Max nTPM: 396.9
Min nTPM: 49.8
Std nTPM: 37.8
Median nTPM: 130.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 396.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 262.3
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 237.6
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 226.4
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 221.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 219.5
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 206.6
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 204.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 200.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 198.9
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 198.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 197.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 197.1
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 196.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 195.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 194.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 192.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 189.7
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 186.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 178.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 178.2
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 175.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 174.5
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 174.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 173.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 172.8
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 169.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 168.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 168.1
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 166.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 166.1
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 165.3
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 164.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 162.4
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 161.7
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 161.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 160.4
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 159.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 157.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 156.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 156.2
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 156.1
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 156.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 155.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 155.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 154.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 152.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 152.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 150.8
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 150.7
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 149.4
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 148.2
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 147.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 147.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 147.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 147.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 146.4
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 146.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 145.7
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 145.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 144.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 144.7
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 144.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 144.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 144.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 143.8
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 143.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 143.6
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 143.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 142.1
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 141.6
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 141.4
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 140.9
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 140.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 140.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 140.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 140.0
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 139.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 139.8
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 139.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 139.6
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 139.5
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 139.0
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 138.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 138.7
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 138.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 136.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 136.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 136.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 135.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 135.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 133.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 133.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 132.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 132.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 132.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 131.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 131.4
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 131.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 130.9
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 130.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 130.0
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 130.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 129.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 129.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 128.9
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 128.2
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 127.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 127.7
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 127.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 126.7
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 126.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 126.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 125.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 125.2
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 124.9
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 124.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 124.3
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 124.3
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 123.7
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 123.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 123.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 121.6
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 121.0
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 120.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 120.6
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 120.3
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 120.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 119.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 119.3
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 119.3
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 119.2
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 119.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 119.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 118.0
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 117.7
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 117.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 117.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 117.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 117.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 117.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 117.0
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 115.9
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 114.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 114.5
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 114.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 114.0
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 114.0
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 113.9
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 113.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 113.7
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 112.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 112.3
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 112.2
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 111.6
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 111.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 110.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 110.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 109.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 109.6
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 109.2
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 108.7
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 108.4
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 107.5
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 106.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 106.9
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 106.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 104.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 103.8
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 103.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 103.7
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 103.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 102.0
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 102.0
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 102.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 101.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 100.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 100.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 99.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 99.7
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 98.9
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 98.7
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 97.5
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 97.2
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 97.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 96.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 95.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 94.2
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 93.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 93.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 92.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 91.3
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 90.9
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 90.7
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 90.0
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 89.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 88.4
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 87.6
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 86.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 80.4
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 77.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 73.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 69.8
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 61.3
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 49.8
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

59.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 42.8
FF:10164-103B2 76 years, female 42.8
Nucleus accumbens
Scaled Tags Per Million: 30.0
FF:10037-101F1 23-56 years, mixed 30.0
Putamen
Scaled Tags Per Million: 39.2
FF:10176-103C5 60 years, female 39.2
Globus pallidus
Scaled Tags Per Million: 59.7
FF:10175-103C4 60 years, female 81.6
FF:10161-103A8 76 years, female 37.8

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

28.3
Pig sample Sample description nTPM
Caudate
nTPM: 22.4
Samples: 4

Max nTPM: 24.4
Min nTPM: 20.4
Sample A Female 21.0
Sample B Female 23.8
Sample C Male 24.4
Sample D Male 20.4
Putamen
nTPM: 28.3
Samples: 4

Max nTPM: 37.1
Min nTPM: 21.6
Sample A Female 29.0
Sample B Female 21.6
Sample C Male 37.1
Sample D Male 25.3
Septum
nTPM: 24.5
Samples: 4

Max nTPM: 27.5
Min nTPM: 22.2
Sample A Female 27.5
Sample B Female 22.2
Sample C Male 25.3
Sample D Male 23.0
Ventral pallidum
nTPM: 21.7
Samples: 4

Max nTPM: 24.7
Min nTPM: 19.8
Sample A Female 19.9
Sample B Female 24.7
Sample C Male 22.3
Sample D Male 19.8

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

93.8
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 75.6
Samples: 4

Max nTPM: 114.6
Min nTPM: 43.8
Sample A Male 81.6
Sample B Male 114.6
Sample C Female 43.8
Sample D Female 62.4
Septum
nTPM: 93.8
Samples: 4

Max nTPM: 114.0
Min nTPM: 70.3
Sample A Male 82.6
Sample B Male 108.2
Sample C Female 114.0
Sample D Female 70.3
Ventral forebrain
nTPM: 81.8
Samples: 4

Max nTPM: 113.2
Min nTPM: 59.4
Sample A Male 85.1
Sample B Male 69.4
Sample C Female 113.2
Sample D Female 59.4

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

3.2
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 3.2
70303761 Antisense, RP_050609_02_D07, Mouse strain C57BL/6J (56 days, male) 3.2
Pallidum
Expression energy: 2.4
70303761 Antisense, RP_050609_02_D07, Mouse strain C57BL/6J (56 days, male) 2.4

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