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BRAIN MEDULLA OBLONGATA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN PONS SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Medulla oblongata
MEDULLA OBLONGATA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
HPA Brain:100.4 nTPM
FANTOM5:194.3 Scaled Tags Per Million

MEDULLA OBLONGATA - Annotated protein expression
Pending normal tissue analysis

MEDULLA OBLONGATA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

100.4
Sample id Sample description nTPM
Area postrema
nTPM: 91.4
2799 Male, age 61, both hemispheres 105.5
2054 Male, age 76, both hemispheres 89.8
2306 Male, age 80, both hemispheres 78.9
Dorsal medullary reticular nucleus
nTPM: 81.3
2373 Male, age 61, both hemispheres 87.4
2040 Female, age 85, both hemispheres 79.4
2088 Male, age 76, both hemispheres 77.2
Dorsal motor vagal complex
nTPM: 100.4
2797 Male, age 61, both hemispheres 117.1
2813 Female, age 72, unknown 107.5
2643 Male, age 74, both hemispheres 102.7
2844 Male, age 55, unknown 99.8
2807 Female, age 85, both hemispheres 99.5
2185 Male, age 76, both hemispheres 96.0
2000 Male, age 74, unknown 91.6
2133 Female, age 91, both hemispheres 89.0
Gigantocellular reticular nuclei, medullary
nTPM: 74.6
2310 Male, age 80, both hemispheres 92.5
2387 Female, age 91, both hemispheres 85.9
2462 Male, age 74, both hemispheres 75.2
2314 Male, age 61, both hemispheres 73.4
2022 Male, age 76, right hemisphere 63.2
1876 Female, age 85, both hemispheres 57.7
Gigantocellular reticular nuclei, pars
nTPM: 90.8
2706 Male, age 80, both hemispheres 101.6
2330 Male, age 80, both hemispheres 95.7
2336 Male, age 61, both hemispheres 91.1
2168 Male, age 76, both hemispheres 89.9
2084 Female, age 85, both hemispheres 75.6
Inferior olive
nTPM: 91.2
2628 Female, age 91, both hemispheres 138.3
2563 Male, age 74, both hemispheres 87.7
2379 Male, age 80, both hemispheres 85.4
2085 Female, age 85, both hemispheres 79.2
2178 Male, age 61, both hemispheres 65.6
Lateral medullary reticular nucleus
nTPM: 81.3
2044 Male, age 76, both hemispheres 95.3
2804 Female, age 91, both hemispheres 92.6
2374 Male, age 61, both hemispheres 82.8
2852 Male, age 80, both hemispheres 75.4
2190 Female, age 85, both hemispheres 74.2
2305 Male, age 74, both hemispheres 67.5
Medial olivary nucleus
nTPM: 63.1
2851 Male, age 80, both hemispheres 95.0
1962 Male, age 76, both hemispheres 58.7
2138 Female, age 91, both hemispheres 50.0
1943 Male, age 61, both hemispheres 48.6
Medial vestibular nucleus
nTPM: 99.2
2624 Male, age 61, both hemispheres 164.6
2801 Male, age 74, both hemispheres 100.8
2134 Male, age 76, both hemispheres 94.6
2803 Female, age 91, both hemispheres 92.9
2093 Male, age 80, both hemispheres 73.5
2743 Female, age 85, both hemispheres 68.6
Motor hypoglossal nucleus
nTPM: 92.0
2461 Male, age 61, both hemispheres 135.5
2182 Male, age 80, both hemispheres 96.5
2132 Female, age 85, both hemispheres 80.6
2277 Male, age 76, both hemispheres 74.2
2125 Female, age 91, both hemispheres 73.2
Nucleus ambiguus
nTPM: 78.5
2096 Female, age 85, both hemispheres 97.3
2071 Male, age 76, both hemispheres 59.6
Nucleus cuneatus
nTPM: 95.8
2805 Female, age 91, both hemispheres 116.2
2562 Male, age 61, both hemispheres 112.1
2564 Male, age 74, both hemispheres 106.4
2808 Female, age 85, both hemispheres 98.0
2131 Male, age 76, both hemispheres 93.3
2100 Male, age 76, both hemispheres 91.1
2381 Male, age 80, both hemispheres 85.9
2376 Male, age 61, both hemispheres 82.9
2380 Male, age 80, both hemispheres 76.7
Nucleus gracilis
nTPM: 87.5
2627 Male, age 74, both hemispheres 93.5
2299 Female, age 85, both hemispheres 89.7
2382 Male, age 80, both hemispheres 79.3
Nucleus raphe obscurus
nTPM: 71.0
2800 Male, age 61, midline 77.5
2845 Female, age 85, midline 75.4
2142 Male, age 76, midline 60.1
Nucleus raphe pallidus
nTPM: 66.9
2183 Male, age 80, midline 80.9
1924 Male, age 61, midline 65.7
2145 Male, age 76, midline 54.2
Nucleus tractus solitarii
nTPM: 81.0
2307 Male, age 80, both hemispheres 106.9
2191 Female, age 85, both hemispheres 91.9
2656 Male, age 76, both hemispheres 85.8
2144 Female, age 91, right hemisphere 39.5
Parvicellular reticular nuclei
nTPM: 73.3
2558 Male, age 74, both hemispheres 90.8
2095 Male, age 76, both hemispheres 66.6
2119 Male, age 80, both hemispheres 62.5
Parvicellular reticular nuclei, medullary
nTPM: 79.1
2181 Male, age 80, left hemisphere 86.7
2189 Female, age 91, both hemispheres 78.6
2091 Female, age 85, both hemispheres 72.0
Peritrigeminal nucleus
nTPM: 79.0
2136 Male, age 76, both hemispheres 79.9
2067 Female, age 85, both hemispheres 78.6
2179 Male, age 61, both hemispheres 78.4
Prepositus hypoglossal nucleus
nTPM: 79.0
2855 Female, age 85, right hemisphere 81.1
2086 Male, age 80, both hemispheres 76.8
Spinal trigeminal nucleus, caudal
nTPM: 92.6
2390 Female, age 91, both hemispheres 106.5
2642 Male, age 74, both hemispheres 94.9
2447 Male, age 76, both hemispheres 94.1
2308 Male, age 80, both hemispheres 91.2
2312 Male, age 61, both hemispheres 76.6
Spinal trigeminal nucleus, interpolar
nTPM: 90.5
2625 Male, age 61, both hemispheres 144.3
2389 Female, age 91, both hemispheres 89.4
2033 Male, age 80, both hemispheres 78.4
2066 Male, age 76, right hemisphere 74.0
2386 Female, age 85, both hemispheres 66.4
Spinal vestibular nucleus
nTPM: 83.4
2796 Male, age 61, both hemispheres 111.5
2780 Male, age 80, both hemispheres 81.6
2806 Female, age 85, both hemispheres 81.6
2748 Male, age 76, both hemispheres 76.2
2186 Female, age 91, both hemispheres 75.9
2384 Male, age 74, both hemispheres 73.7
Superior vestibular nucleus
nTPM: 69.1
2061 Male, age 76, both hemispheres 74.4
2015 Male, age 80, both hemispheres 73.2
2383 Male, age 74, both hemispheres 59.6
Ventral medullary reticular nucleus
nTPM: 71.3
2060 Male, age 76, both hemispheres 74.2
2372 Male, age 61, both hemispheres 68.4
Ventrolateral medulla, A1-C1 cell groups
nTPM: 76.6
2302 Female, age 91, both hemispheres 87.0
1986 Male, age 76, both hemispheres 79.2
2180 Male, age 61, both hemispheres 77.3
2741 Female, age 85, both hemispheres 75.1
2118 Male, age 80, both hemispheres 64.3

MEDULLA OBLONGATA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

194.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Medulla oblongata
Scaled Tags Per Million: 194.3
FF:10174-103C3 60 years, female 241.4
FF:10038-101F2 18-64 years, mixed 197.1
FF:10155-103A2 76 years, female 144.4

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