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COX6B1
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TISSUE PRIMARY DATA RETINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
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Dictionary
Tissue proteome
Eye
Retina
RETINA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:267.9 nTPM
GTEx:267.9 nTPM
FANTOM5:213.9 Scaled Tags Per Million
Pig:326.1 nTPM
Mouse:568.9 nTPM

RETINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

267.9
GTEx sample id Sample description nTPM
Retina
Average nTPM: 267.9
Samples: 105

Max nTPM: 362.1
Min nTPM: 105.3
Std nTPM: 53.1
Median nTPM:
177_1 74 years, male 362.1
243_1 75 years, male 360.1
322_1 76 years, male 359.9
153_1 70 years, female 359.6
375_1 74 years, female 359.4
163_1 78 years, male 357.0
321_1 62 years, female 355.9
386_1 76 years, male 343.8
319_1 81 years, male 338.2
229_1 69 years, female 336.5
189_1 76 years, male 332.7
452_1 88 years, female 332.0
172_1 72 years, female 331.1
379_1 60 years, male 327.0
4_1 88 years, female 323.3
425_1 59 years, female 321.0
6_1 73 years, female 316.6
447_1 81 years, male 314.3
173_1 67 years, male 313.3
377_1 82 years, female 312.8
237_1 82 years, male 307.6
404_1 82 years, female 306.3
405_1 91 years, male 305.3
17_1 71 years, male 303.4
218_1 71 years, female 299.6
396_1 62 years, male 299.6
376_1 75 years, female 299.2
480_1 63 years, male 296.9
265_1 87 years, male 296.7
506_1 65 years, male 295.9
350_1 84 years, female 294.4
389_1 86 years, female 292.8
266_1 85 years, male 292.5
354_1 81 years, female 291.6
347_1 72 years, male 290.9
352_1 62 years, male 290.7
142_1 61 years, female 287.0
246_1 77 years, male 286.8
394_1 75 years, female 286.8
254_1 77 years, female 286.4
384_1 83 years, male 285.0
115_1 83 years, male 283.1
335_1 73 years, female 282.6
320_1 89 years, female 282.3
35_1 74 years, female 280.8
286_1 68 years, female 278.7
145_1 84 years, male 278.1
518_1 75 years, female 277.9
316_1 62 years, male 277.6
406_1 79 years, male 276.3
468_1 89 years, male 275.7
293_1 68 years, female 275.6
313_1 79 years, female 275.6
41_1 94 years, female 274.5
99_1 64 years, male 274.2
2_1 77 years, female 273.3
517_1 88 years, male 272.4
264_1 73 years, female 271.6
137_1 83 years, male 271.4
109_1 81 years, female 270.8
120_1 70 years, female 269.4
217_1 76 years, male 266.4
351_1 91 years, male 265.7
318_1 68 years, male 265.2
349_1 83 years, male 265.2
499_1 55 years, female 264.4
526_1 61 years, male 262.8
355_1 70 years, female 259.8
18_1 88 years, male 256.1
317_1 60 years, male 254.5
126_1 63 years, male 252.3
356_1 87 years, female 252.0
81_1 67 years, male 250.2
162_1 79 years, female 247.8
414_1 84 years, female 246.8
9_1 66 years, female 240.4
295_1 61 years, female 239.2
324_1 76 years, male 239.2
117_1 61 years, male 237.2
315_1 62 years, female 236.5
251_1 78 years, male 235.5
353_1 82 years, female 234.9
503_1 68 years, male 230.5
307_1 66 years, female 230.2
308_1 70 years, female 228.6
291_1 76 years, male 223.1
42_1 85 years, male 222.9
139_1 64 years, female 216.9
288_1 66 years, female 212.6
292_1 71 years, male 210.8
119_1 70 years, female 210.4
495_1 57 years, female 210.1
348_1 84 years, male 201.8
314_1 67 years, male 196.8
413_1 59 years, female 194.3
311_1 78 years, male 192.0
501_1 88 years, male 187.2
32_1 67 years, male 181.0
466_1 57 years, female 179.5
415_1 77 years, female 178.6
89_1 63 years, male 174.3
43_1 64 years, female 162.0
490_1 67 years, female 120.6
149_1 88 years, male 113.7
491_1 89 years, female 105.3
Show allShow less

RETINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

213.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Retina
Scaled Tags Per Million: 213.9
FF:10030-101E3 24-65 years, mixed 213.9

RETINA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

326.1
Pig sample Sample description nTPM
Retina
nTPM: 326.1
Samples: 4

Max nTPM: 366.0
Min nTPM: 301.3
Sample A Female 301.4
Sample B Female 335.7
Sample C Male 366.0
Sample D Male 301.3

RETINA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

568.9
Mouse sample Sample description nTPM
Retina
nTPM: 568.9
Samples: 4

Max nTPM: 660.6
Min nTPM: 488.4
Sample A Male 600.6
Sample B Male 525.9
Sample C Female 660.6
Sample D Female 488.4

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