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CCR7
HPA
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  • CCR7
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

CCR7
Synonyms BLR2, CD197, CDw197, CMKBR7, EBI1
Gene descriptioni

Full gene name according to HGNC.

C-C motif chemokine receptor 7
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Cancer-related genes
CD markers
G-protein coupled receptors
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 17
Cytoband q21.2
Chromosome location (bp) 40553769 - 40565472
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

3
Ensembl ENSG00000126353 (version 109)
Entrez gene 1236
HGNC HGNC:1608
UniProt P32248 (UniProt - Evidence at protein level)
neXtProt NX_P32248
GeneCards CCR7
Antibodypedia CCR7 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Receptor for the MIP-3-beta chemokine. Probable mediator of EBV effects on B-lymphocytes or of normal lymphocyte functions.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

G-protein coupled receptor, Receptor, Transducer
Gene summary (Entrez)i

Useful information about the gene from Entrez

The protein encoded by this gene is a member of the G protein-coupled receptor family. This receptor was identified as a gene induced by the Epstein-Barr virus (EBV), and is thought to be a mediator of EBV effects on B lymphocytes. This receptor is expressed in various lymphoid tissues and activates B and T lymphocytes. It has been shown to control the migration of memory T cells to inflamed tissues, as well as stimulate dendritic cell maturation. The chemokine (C-C motif) ligand 19 (CCL19/ECL) has been reported to be a specific ligand of this receptor. Signals mediated by this receptor regulate T cell homeostasis in lymph nodes, and may also function in the activation and polarization of T cells, and in chronic inflammation pathogenesis. Alternative splicing of this gene results in multiple transcript variants. [provided by RefSeq, Sep 2014]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
CCR7-201
ENSP00000246657
ENST00000246657
P32248
[Direct mapping] C-C chemokine receptor type 7
Show all
A0N0Q0
[Target identity:100%; Query identity:100%] Chemokine (C-C motif) receptor 7; cDNA FLJ45911 fis, clone PEBLM2005615, highly similar to C-C chemokine receptor type 7
Show all
CD markers
G-protein coupled receptors
   GPCRs excl olfactory receptors
   Chemokines and chemotactic factors receptors
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   GPCRHMM predicted membrane proteins
   # TM segments-based
   7TM proteins predicted by MDM
Cancer-related genes
   Candidate cancer biomarkers
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0001768 [establishment of T cell polarity]
GO:0001954 [positive regulation of cell-matrix adhesion]
GO:0002407 [dendritic cell chemotaxis]
GO:0002408 [myeloid dendritic cell chemotaxis]
GO:0002606 [positive regulation of dendritic cell antigen processing and presentation]
GO:0002885 [positive regulation of hypersensitivity]
GO:0002922 [positive regulation of humoral immune response]
GO:0004930 [G protein-coupled receptor activity]
GO:0004950 [chemokine receptor activity]
GO:0005739 [mitochondrion]
GO:0005886 [plasma membrane]
GO:0006935 [chemotaxis]
GO:0006954 [inflammatory response]
GO:0006955 [immune response]
GO:0007165 [signal transduction]
GO:0007186 [G protein-coupled receptor signaling pathway]
GO:0007204 [positive regulation of cytosolic calcium ion concentration]
GO:0009897 [external side of plasma membrane]
GO:0009986 [cell surface]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016493 [C-C chemokine receptor activity]
GO:0019722 [calcium-mediated signaling]
GO:0019957 [C-C chemokine binding]
GO:0030838 [positive regulation of actin filament polymerization]
GO:0031274 [positive regulation of pseudopodium assembly]
GO:0031529 [ruffle organization]
GO:0032496 [response to lipopolysaccharide]
GO:0032649 [regulation of interferon-gamma production]
GO:0032651 [regulation of interleukin-1 beta production]
GO:0032695 [negative regulation of interleukin-12 production]
GO:0032735 [positive regulation of interleukin-12 production]
GO:0034695 [response to prostaglandin E]
GO:0035757 [chemokine (C-C motif) ligand 19 binding]
GO:0035758 [chemokine (C-C motif) ligand 21 binding]
GO:0038115 [chemokine (C-C motif) ligand 19 signaling pathway]
GO:0038116 [chemokine (C-C motif) ligand 21 signaling pathway]
GO:0038117 [C-C motif chemokine 19 receptor activity]
GO:0038121 [C-C motif chemokine 21 receptor activity]
GO:0043123 [positive regulation of I-kappaB kinase/NF-kappaB signaling]
GO:0043552 [positive regulation of phosphatidylinositol 3-kinase activity]
GO:0045060 [negative thymic T cell selection]
GO:0045785 [positive regulation of cell adhesion]
GO:0045860 [positive regulation of protein kinase activity]
GO:0046330 [positive regulation of JNK cascade]
GO:0048872 [homeostasis of number of cells]
GO:0050862 [positive regulation of T cell receptor signaling pathway]
GO:0051209 [release of sequestered calcium ion into cytosol]
GO:0051491 [positive regulation of filopodium assembly]
GO:0051897 [positive regulation of protein kinase B signaling]
GO:0060326 [cell chemotaxis]
GO:0070098 [chemokine-mediated signaling pathway]
GO:0070374 [positive regulation of ERK1 and ERK2 cascade]
GO:0071345 [cellular response to cytokine stimulus]
GO:0071731 [response to nitric oxide]
GO:0090023 [positive regulation of neutrophil chemotaxis]
GO:0090630 [activation of GTPase activity]
GO:0097022 [lymphocyte migration into lymph node]
GO:0097029 [mature conventional dendritic cell differentiation]
GO:2000147 [positive regulation of cell motility]
GO:2000510 [positive regulation of dendritic cell chemotaxis]
GO:2000522 [positive regulation of immunological synapse formation]
GO:2000525 [positive regulation of T cell costimulation]
GO:2000526 [positive regulation of glycoprotein biosynthetic process involved in immunological synapse formation]
GO:2000547 [regulation of dendritic cell dendrite assembly]
GO:2000669 [negative regulation of dendritic cell apoptotic process]
Show all
378 aa
42.9 kDa
Yes 7
CCR7-202
ENSP00000463075
ENST00000578085
J3KTN5
[Direct mapping] C-C chemokine receptor type 7
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   5TM proteins predicted by MDM
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0004930 [G protein-coupled receptor activity]
GO:0004950 [chemokine receptor activity]
GO:0005886 [plasma membrane]
GO:0006935 [chemotaxis]
GO:0006954 [inflammatory response]
GO:0006955 [immune response]
GO:0007165 [signal transduction]
GO:0007186 [G protein-coupled receptor signaling pathway]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016493 [C-C chemokine receptor activity]
GO:0070098 [chemokine-mediated signaling pathway]
Show all
199 aa
22.6 kDa
No 5
CCR7-203
ENSP00000462631
ENST00000579344
J3KSS9
[Direct mapping] C-C chemokine receptor type 7
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   GPCRHMM predicted membrane proteins
   # TM segments-based
   7TM proteins predicted by MDM
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0004930 [G protein-coupled receptor activity]
GO:0004950 [chemokine receptor activity]
GO:0005739 [mitochondrion]
GO:0005886 [plasma membrane]
GO:0006935 [chemotaxis]
GO:0006954 [inflammatory response]
GO:0006955 [immune response]
GO:0007165 [signal transduction]
GO:0007186 [G protein-coupled receptor signaling pathway]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016493 [C-C chemokine receptor activity]
GO:0070098 [chemokine-mediated signaling pathway]
Show all
372 aa
42.2 kDa
Yes 7

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