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PRMT1
HPA
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  • PRMT1
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

PRMT1
Synonyms ANM1, HCP1, HRMT1L2
Gene descriptioni

Full gene name according to HGNC.

Protein arginine methyltransferase 1
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Enzymes
Plasma proteins
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 19
Cytoband q13.33
Chromosome location (bp) 49675786 - 49689029
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

11
Ensembl ENSG00000126457 (version 109)
Entrez gene 3276
HGNC HGNC:5187
UniProt Q99873 (UniProt - Evidence at protein level)
neXtProt NX_Q99873
GeneCards PRMT1
Antibodypedia PRMT1 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Arginine methyltransferase that methylates (mono and asymmetric dimethylation) the guanidino nitrogens of arginyl residues present in proteins such as ESR1, histone H2, H3 and H4, FMR1, ILF3, HNRNPA1, HNRNPD, NFATC2IP, SUPT5H, TAF15, EWS, HABP4, SERBP1, RBM15, FOXO1, CHTOP, MAP3K5/ASK1, MICU1 and NPRL2 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12. Constitutes the main enzyme that mediates monomethylation and asymmetric dimethylation of histone H4 'Arg-4' (H4R3me1 and H4R3me2a, respectively), a specific tag for epigenetic transcriptional activation. May be involved in the regulation of TAF15 transcriptional activity, act as an activator of estrogen receptor (ER)-mediated transactivation, play a key role in neurite outgrowth and act as a negative regulator of megakaryocytic differentiation, by modulating p38 MAPK pathway. Methylates RBM15, promoting ubiquitination and degradation of RBM15 13. Methylates MRE11 and TP53BP1, promoting the DNA damage response 14, 15, 16. Methylates FOXO1 and retains it in the nucleus increasing its transcriptional activity 17. Methylates CHTOP and this methylation is critical for its 5-hydroxymethylcytosine (5hmC)-binding activity 18. Methylates MAP3K5/ASK1 at 'Arg-78' and 'Arg-80' which promotes association of MAP3K5 with thioredoxin and negatively regulates MAP3K5 association with TRAF2, inhibiting MAP3K5 stimulation and MAP3K5-induced activation of JNK 19. Methylates H4R3 in genes involved in glioblastomagenesis in a CHTOP- and/or TET1-dependent manner 20. Plays a role in regulating alternative splicing in the heart (By similarity). Methylates NPRL2 at 'Arg-78' leading to inhibition of its GTPase activator activity and then the GATOR1 complex and consequently inducing timely mTORC1 activation under methionine-sufficient conditions 21.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Methyltransferase, Transferase
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

S-adenosyl-L-methionine
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes a member of the protein arginine N-methyltransferase (PRMT) family. Post-translational modification of target proteins by PRMTs plays an important regulatory role in many biological processes, whereby PRMTs methylate arginine residues by transferring methyl groups from S-adenosyl-L-methionine to terminal guanidino nitrogen atoms. The encoded protein is a type I PRMT and is responsible for the majority of cellular arginine methylation activity. Increased expression of this gene may play a role in many types of cancer. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene, and a pseudogene of this gene is located on the long arm of chromosome 5. [provided by RefSeq, Dec 2011]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
PRMT1-201
ENSP00000375724
ENST00000391851
Q99873
[Direct mapping] Protein arginine N-methyltransferase 1
Show all
Enzymes
   ENZYME proteins
   Transferases
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003723 [RNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006479 [protein methylation]
GO:0007166 [cell surface receptor signaling pathway]
GO:0008168 [methyltransferase activity]
GO:0008170 [N-methyltransferase activity]
GO:0008276 [protein methyltransferase activity]
GO:0008284 [positive regulation of cell population proliferation]
GO:0008327 [methyl-CpG binding]
GO:0008380 [RNA splicing]
GO:0008757 [S-adenosylmethionine-dependent methyltransferase activity]
GO:0016274 [protein-arginine N-methyltransferase activity]
GO:0016571 [histone methylation]
GO:0016740 [transferase activity]
GO:0018216 [peptidyl-arginine methylation]
GO:0019082 [viral protein processing]
GO:0019899 [enzyme binding]
GO:0031175 [neuron projection development]
GO:0032259 [methylation]
GO:0034709 [methylosome]
GO:0035241 [protein-arginine omega-N monomethyltransferase activity]
GO:0035242 [protein-arginine omega-N asymmetric methyltransferase activity]
GO:0042054 [histone methyltransferase activity]
GO:0042802 [identical protein binding]
GO:0043985 [histone H4-R3 methylation]
GO:0044020 [histone methyltransferase activity (H4-R3 specific)]
GO:0045648 [positive regulation of erythrocyte differentiation]
GO:0045652 [regulation of megakaryocyte differentiation]
GO:0045653 [negative regulation of megakaryocyte differentiation]
GO:0046329 [negative regulation of JNK cascade]
GO:0046985 [positive regulation of hemoglobin biosynthetic process]
GO:0048273 [mitogen-activated protein kinase p38 binding]
GO:0048738 [cardiac muscle tissue development]
GO:0051260 [protein homooligomerization]
GO:1900745 [positive regulation of p38MAPK cascade]
GO:1904047 [S-adenosyl-L-methionine binding]
Show all
353 aa
40.5 kDa
No 0
PRMT1-202
ENSP00000406162
ENST00000454376
Q99873
[Direct mapping] Protein arginine N-methyltransferase 1
Show all
Enzymes
   ENZYME proteins
   Transferases
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001701 [in utero embryonic development]
GO:0003723 [RNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006479 [protein methylation]
GO:0007166 [cell surface receptor signaling pathway]
GO:0008168 [methyltransferase activity]
GO:0008170 [N-methyltransferase activity]
GO:0008276 [protein methyltransferase activity]
GO:0008284 [positive regulation of cell population proliferation]
GO:0008327 [methyl-CpG binding]
GO:0008380 [RNA splicing]
GO:0008757 [S-adenosylmethionine-dependent methyltransferase activity]
GO:0016274 [protein-arginine N-methyltransferase activity]
GO:0016571 [histone methylation]
GO:0016740 [transferase activity]
GO:0018216 [peptidyl-arginine methylation]
GO:0019082 [viral protein processing]
GO:0019899 [enzyme binding]
GO:0031175 [neuron projection development]
GO:0032259 [methylation]
GO:0034709 [methylosome]
GO:0035241 [protein-arginine omega-N monomethyltransferase activity]
GO:0035242 [protein-arginine omega-N asymmetric methyltransferase activity]
GO:0042054 [histone methyltransferase activity]
GO:0042802 [identical protein binding]
GO:0043985 [histone H4-R3 methylation]
GO:0044020 [histone methyltransferase activity (H4-R3 specific)]
GO:0045648 [positive regulation of erythrocyte differentiation]
GO:0045652 [regulation of megakaryocyte differentiation]
GO:0045653 [negative regulation of megakaryocyte differentiation]
GO:0046329 [negative regulation of JNK cascade]
GO:0046985 [positive regulation of hemoglobin biosynthetic process]
GO:0048273 [mitogen-activated protein kinase p38 binding]
GO:0048738 [cardiac muscle tissue development]
GO:0051260 [protein homooligomerization]
GO:1900745 [positive regulation of p38MAPK cascade]
GO:1904047 [S-adenosyl-L-methionine binding]
Show all
371 aa
42.5 kDa
No 0
PRMT1-203
ENSP00000433480
ENST00000524771
H0YDE4
[Direct mapping] Protein arginine N-methyltransferase 1
Show all
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005654 [nucleoplasm]
GO:0008168 [methyltransferase activity]
GO:0008170 [N-methyltransferase activity]
GO:0008276 [protein methyltransferase activity]
GO:0008757 [S-adenosylmethionine-dependent methyltransferase activity]
GO:0016274 [protein-arginine N-methyltransferase activity]
GO:0016571 [histone methylation]
GO:0016740 [transferase activity]
GO:0018216 [peptidyl-arginine methylation]
GO:0032259 [methylation]
Show all
238 aa
26.9 kDa
No 0
PRMT1-206
ENSP00000432788
ENST00000526224
E9PNR9
[Direct mapping] Protein arginine N-methyltransferase 1
Show all
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0008168 [methyltransferase activity]
GO:0008170 [N-methyltransferase activity]
GO:0008276 [protein methyltransferase activity]
GO:0008757 [S-adenosylmethionine-dependent methyltransferase activity]
GO:0016274 [protein-arginine N-methyltransferase activity]
GO:0016571 [histone methylation]
GO:0016740 [transferase activity]
GO:0018216 [peptidyl-arginine methylation]
GO:0032259 [methylation]
Show all
160 aa
18.3 kDa
No 0
PRMT1-207
ENSP00000432538
ENST00000527382
E9PQ98
[Direct mapping] Protein arginine N-methyltransferase 1
Show all
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0008168 [methyltransferase activity]
GO:0008170 [N-methyltransferase activity]
GO:0008276 [protein methyltransferase activity]
GO:0008757 [S-adenosylmethionine-dependent methyltransferase activity]
GO:0016274 [protein-arginine N-methyltransferase activity]
GO:0016571 [histone methylation]
GO:0016740 [transferase activity]
GO:0018216 [peptidyl-arginine methylation]
GO:0032259 [methylation]
Show all
205 aa
23.6 kDa
No 0
PRMT1-211
ENSP00000434911
ENST00000528623
E9PMZ2
[Direct mapping] Protein arginine N-methyltransferase 1
Show all
   DeepTMHMM predicted secreted proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0008276 [protein methyltransferase activity]
GO:0016274 [protein-arginine N-methyltransferase activity]
GO:0018216 [peptidyl-arginine methylation]
Show all
63 aa
7.4 kDa
No 0
PRMT1-212
ENSP00000432349
ENST00000529284
E9PNR9
[Direct mapping] Protein arginine N-methyltransferase 1
Show all
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0008168 [methyltransferase activity]
GO:0008170 [N-methyltransferase activity]
GO:0008276 [protein methyltransferase activity]
GO:0008757 [S-adenosylmethionine-dependent methyltransferase activity]
GO:0016274 [protein-arginine N-methyltransferase activity]
GO:0016571 [histone methylation]
GO:0016740 [transferase activity]
GO:0018216 [peptidyl-arginine methylation]
GO:0032259 [methylation]
Show all
160 aa
18.3 kDa
No 0
PRMT1-214
ENSP00000437273
ENST00000529836
E9PMW9
[Direct mapping] Protein arginine N-methyltransferase 1
Show all
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0008168 [methyltransferase activity]
GO:0008276 [protein methyltransferase activity]
GO:0016274 [protein-arginine N-methyltransferase activity]
GO:0016740 [transferase activity]
GO:0018216 [peptidyl-arginine methylation]
GO:0032259 [methylation]
Show all
110 aa
12.2 kDa
No 0
PRMT1-217
ENSP00000433556
ENST00000532489
E9PKG1
[Direct mapping] Protein arginine N-methyltransferase 1
Show all
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0008168 [methyltransferase activity]
GO:0008170 [N-methyltransferase activity]
GO:0008276 [protein methyltransferase activity]
GO:0008757 [S-adenosylmethionine-dependent methyltransferase activity]
GO:0016274 [protein-arginine N-methyltransferase activity]
GO:0016571 [histone methylation]
GO:0016740 [transferase activity]
GO:0018216 [peptidyl-arginine methylation]
GO:0032259 [methylation]
Show all
325 aa
37.7 kDa
No 0
PRMT1-219
ENSP00000431957
ENST00000534465
E9PIX6
[Direct mapping] Protein arginine N-methyltransferase 1
Show all
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0008168 [methyltransferase activity]
GO:0008170 [N-methyltransferase activity]
GO:0008276 [protein methyltransferase activity]
GO:0008757 [S-adenosylmethionine-dependent methyltransferase activity]
GO:0016274 [protein-arginine N-methyltransferase activity]
GO:0016571 [histone methylation]
GO:0016740 [transferase activity]
GO:0018216 [peptidyl-arginine methylation]
GO:0032259 [methylation]
Show all
207 aa
23.8 kDa
No 0
PRMT1-221
ENSP00000484505
ENST00000610806
Q99873
[Direct mapping] Protein arginine N-methyltransferase 1
Show all
Enzymes
   ENZYME proteins
   Transferases
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003723 [RNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005654 [nucleoplasm]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0006479 [protein methylation]
GO:0007166 [cell surface receptor signaling pathway]
GO:0008168 [methyltransferase activity]
GO:0008170 [N-methyltransferase activity]
GO:0008276 [protein methyltransferase activity]
GO:0008284 [positive regulation of cell population proliferation]
GO:0008327 [methyl-CpG binding]
GO:0008380 [RNA splicing]
GO:0008757 [S-adenosylmethionine-dependent methyltransferase activity]
GO:0016274 [protein-arginine N-methyltransferase activity]
GO:0016571 [histone methylation]
GO:0016740 [transferase activity]
GO:0018216 [peptidyl-arginine methylation]
GO:0019082 [viral protein processing]
GO:0019899 [enzyme binding]
GO:0031175 [neuron projection development]
GO:0032259 [methylation]
GO:0034709 [methylosome]
GO:0035241 [protein-arginine omega-N monomethyltransferase activity]
GO:0035242 [protein-arginine omega-N asymmetric methyltransferase activity]
GO:0042054 [histone methyltransferase activity]
GO:0042802 [identical protein binding]
GO:0043985 [histone H4-R3 methylation]
GO:0044020 [histone methyltransferase activity (H4-R3 specific)]
GO:0045648 [positive regulation of erythrocyte differentiation]
GO:0045652 [regulation of megakaryocyte differentiation]
GO:0045653 [negative regulation of megakaryocyte differentiation]
GO:0046329 [negative regulation of JNK cascade]
GO:0046985 [positive regulation of hemoglobin biosynthetic process]
GO:0048273 [mitogen-activated protein kinase p38 binding]
GO:0048738 [cardiac muscle tissue development]
GO:0051260 [protein homooligomerization]
GO:1900745 [positive regulation of p38MAPK cascade]
GO:1904047 [S-adenosyl-L-methionine binding]
Show all
285 aa
32.7 kDa
No 0

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