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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:33.6 nTPM
HPA Brain:104.1 nTPM
GTEx:33.6 nTPM
FANTOM5:52.0 Scaled Tags Per Million
Pig:26.2 nTPM
Mouse:53.1 nTPM
Allen mouse:5.7 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA046828
Glial cells Low
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

104.1
Sample id Sample description nTPM
Caudate nucleus
nTPM: 91.1
1781 Male, age 74, unknown 104.9
2289 Male, age 61, right hemisphere 100.2
2290 Female, age 72, unknown 97.8
2288 Male, age 75, left hemisphere 97.7
2846 Female, age 79, unknown 86.9
2481 Female, age 94, left hemisphere 83.1
1857 Female, age 85, left hemisphere 81.9
1854 Male, age 80, left hemisphere 76.1
Globus pallidus, externus
nTPM: 86.7
2646 Male, age 61, right hemisphere 98.3
2567 Female, age 72, unknown 93.5
2772 Female, age 79, unknown 93.0
1996 Male, age 80, right hemisphere 78.4
2395 Male, age 75, both hemispheres 70.0
Globus pallidus, internus
nTPM: 80.4
2566 Female, age 72, unknown 90.4
2778 Female, age 91, both hemispheres 85.9
1818 Male, age 74, unknown 80.6
2483 Female, age 94, right hemisphere 78.9
2111 Female, age 85, right hemisphere 78.6
2287 Male, age 75, right hemisphere 77.7
2037 Male, age 80, right hemisphere 70.7
Nucleus accumbens
nTPM: 86.8
1783 Male, age 74, unknown 101.1
1856 Female, age 91, right hemisphere 91.3
1806 Female, age 85, left hemisphere 90.7
2824 Male, age 61, right hemisphere 89.9
2286 Male, age 75, left hemisphere 89.8
2698 Female, age 72, unknown 84.8
2732 Male, age 80, right hemisphere 81.3
2391 Female, age 94, left hemisphere 66.0
Nucleus basalis of Meynert
nTPM: 84.1
2569 Male, age 61, both hemispheres 100.7
2484 Female, age 94, left hemisphere 85.7
2821 Male, age 75, both hemispheres 79.9
2393 Male, age 80, right hemisphere 70.0
Nucleus of the diagonal band
nTPM: 104.1
2029 Male, age 61, right hemisphere 112.3
2775 Male, age 80, right hemisphere 111.6
2195 Female, age 85, both hemispheres 107.4
1812 Female, age 91, both hemispheres 101.2
1979 Male, age 74, unknown 87.8
Putamen
nTPM: 89.9
2647 Male, age 75, left hemisphere 111.5
1829 Male, age 74, unknown 90.3
2489 Female, age 72, unknown 89.4
2466 Female, age 79, unknown 87.6
1937 Female, age 91, right hemisphere 86.0
1838 Male, age 80, right hemisphere 83.8
2482 Female, age 94, left hemisphere 80.8
Septal nuclei
nTPM: 97.5
1960 Male, age 74, unknown 121.4
2059 Female, age 85, both hemispheres 107.5
2031 Female, age 72, unknown 103.4
2629 Female, age 94, right hemisphere 100.5
2394 Male, age 61, left hemisphere 87.3
2009 Female, age 91, both hemispheres 86.5
2199 Male, age 80, right hemisphere 76.1
Stria terminalis, bed nucleus
nTPM: 102.4
1974 Female, age 91, both hemispheres 113.8
2486 Female, age 94, both hemispheres 102.6
2201 Male, age 74, unknown 90.7

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

33.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 30.2
Samples: 246

Max nTPM: 48.9
Min nTPM: 12.5
Std nTPM: 6.6
Median nTPM: 30.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 48.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 45.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 45.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 44.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 44.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 43.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 43.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 43.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 43.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 43.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 42.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 42.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 42.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 41.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 41.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 41.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 41.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 41.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 41.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 41.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 40.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 39.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 39.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 39.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 39.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 38.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 38.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 38.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 38.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 37.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 37.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 37.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 37.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 37.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 37.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 37.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 37.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 36.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 36.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 36.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 36.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 36.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 36.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 36.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 36.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 36.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 36.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 36.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 35.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 35.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 35.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 35.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 35.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 35.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 35.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 35.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 34.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 34.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 34.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 34.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 34.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 34.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 34.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 34.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 34.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 34.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 34.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 33.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 33.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 33.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 33.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 33.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 33.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 33.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 33.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 33.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 33.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 33.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 33.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 33.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 33.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 33.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 33.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 33.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 33.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 33.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 33.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 32.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 32.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 32.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 32.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 32.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 32.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 32.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 32.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 32.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 32.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 32.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 32.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 32.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 31.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 31.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 31.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 31.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 31.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 31.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 31.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 31.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 31.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 31.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 30.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 30.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 30.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 30.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 30.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 30.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 30.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 30.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 30.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 30.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 30.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 30.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 30.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 30.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 30.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 30.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 29.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 29.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 29.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 29.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 29.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 29.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 29.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 29.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 29.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 29.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 29.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 29.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 29.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 29.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 28.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 28.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 28.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 28.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 28.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 28.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 28.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 28.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 28.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 28.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 28.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 28.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 28.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 28.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 28.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 28.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 27.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 27.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 27.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 27.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 27.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 27.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 27.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 26.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 26.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 26.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 26.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 26.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 26.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 26.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 26.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 26.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 26.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 26.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 26.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 26.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 26.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 25.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 25.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 25.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 25.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 25.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 25.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 25.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 25.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 25.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 25.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 25.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 25.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 25.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 24.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 24.9
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 24.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 24.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 24.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 24.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 24.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 24.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 24.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 24.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 23.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 23.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 23.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 23.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 23.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 23.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 23.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 23.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 22.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 22.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 22.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 22.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 22.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 22.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 22.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 22.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 22.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 21.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 21.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 21.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 21.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 21.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 21.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 21.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 21.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 21.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 20.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 20.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 20.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 20.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 20.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 20.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 20.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 20.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 19.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 19.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 19.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 19.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 18.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 18.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 18.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 18.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 18.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 17.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 13.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 12.5
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 33.6
Samples: 246

Max nTPM: 52.6
Min nTPM: 16.5
Std nTPM: 7.0
Median nTPM: 34.2
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 52.6
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 52.6
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 49.4
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 48.4
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 47.2
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 46.3
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 46.0
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 45.7
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 45.2
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 44.8
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 44.5
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 43.5
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 43.5
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 43.5
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 43.0
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 43.0
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 42.9
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 42.9
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 42.8
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 42.8
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 42.7
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 42.6
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 42.5
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 42.5
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 42.4
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 42.3
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 42.1
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 42.1
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 42.0
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 42.0
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 42.0
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 41.8
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 41.8
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 41.8
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 41.8
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 41.8
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 41.8
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 41.7
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 41.7
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 41.6
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 41.5
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 41.2
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 41.0
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 40.9
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 40.9
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 40.8
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 40.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 40.4
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 40.4
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 40.3
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 40.2
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 40.0
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 39.5
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 39.0
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 38.8
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 38.7
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 38.6
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 38.6
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 38.4
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 38.4
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 38.3
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 38.2
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 38.1
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 38.1
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 38.1
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 38.1
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 38.1
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 38.0
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 37.7
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 37.7
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 37.6
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 37.6
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 37.6
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 37.6
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 37.5
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 37.3
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 37.3
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 37.3
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 37.3
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 37.3
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 37.2
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 37.2
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 37.1
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 37.1
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 37.0
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 36.8
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 36.8
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 36.6
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 36.5
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 36.5
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 36.4
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 36.4
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 36.2
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 36.1
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 36.1
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 36.1
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 36.0
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 35.9
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 35.8
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 35.7
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 35.7
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 35.5
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 35.4
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 35.4
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 35.3
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 35.3
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 35.2
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 35.1
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 35.0
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 34.9
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 34.8
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 34.8
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 34.7
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 34.5
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 34.5
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 34.5
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 34.5
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 34.5
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 34.4
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 34.3
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 34.3
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 34.2
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 34.2
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 34.2
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 34.0
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 33.8
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 33.7
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 33.7
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 33.6
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 33.5
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 33.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 33.4
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 33.2
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 33.2
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 32.8
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 32.7
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 32.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 32.6
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 32.5
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 32.4
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 32.4
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 32.3
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 32.3
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 32.3
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 32.1
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 32.1
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 32.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 32.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 32.0
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 31.9
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 31.9
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 31.9
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 31.8
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 31.7
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 31.6
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 31.5
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 31.2
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 31.0
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 31.0
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 30.9
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 30.5
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 30.4
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 30.4
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 30.3
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 30.2
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 30.2
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 30.2
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 30.2
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 30.0
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 29.9
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 29.9
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 29.8
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 29.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 29.5
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 29.3
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 29.3
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 29.2
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 29.1
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 29.0
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 28.9
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 28.8
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 28.8
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 28.7
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 28.7
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 28.6
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 28.5
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 28.3
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 28.2
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 28.2
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 28.0
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 28.0
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 27.8
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 27.7
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 27.6
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 27.6
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 27.5
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 27.2
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 27.2
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 27.1
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 26.8
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 26.6
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 26.4
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 25.9
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 25.8
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 25.6
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 25.6
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 25.5
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 25.3
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 25.3
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 25.2
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 25.1
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 25.0
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 25.0
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 24.9
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 24.7
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 24.7
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 24.7
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 24.3
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 24.2
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 24.1
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 23.9
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 23.8
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 23.8
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 23.7
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 23.6
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 23.3
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 23.1
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 23.0
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 22.6
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 22.3
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 22.2
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 22.2
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 22.2
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 22.1
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 21.8
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 21.7
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 21.5
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 21.1
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 20.9
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 20.5
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 20.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 19.8
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 19.4
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 18.1
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 17.2
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 16.5
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Brain - Putamen (basal ganglia)
Average nTPM: 31.9
Samples: 205

Max nTPM: 51.0
Min nTPM: 14.4
Std nTPM: 7.0
Median nTPM: 31.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 51.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 50.3
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 47.8
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 47.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 46.2
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 45.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 45.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 44.7
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 44.6
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 44.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 43.7
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 43.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 43.4
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 43.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 42.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 42.7
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 42.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 42.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 41.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 41.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 41.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 41.0
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 40.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 40.6
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 40.3
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 40.2
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 40.0
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 39.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 39.8
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 39.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 39.5
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 39.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 39.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 39.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 39.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 38.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 38.3
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 38.3
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 38.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 38.3
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 38.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 38.0
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 38.0
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 37.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 37.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 37.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 37.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 37.3
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 37.3
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 37.3
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 37.1
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 37.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 37.0
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 36.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 36.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 36.3
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 36.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 36.1
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 36.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 36.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 35.9
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 35.9
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 35.9
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 35.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 35.8
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 35.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 35.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 35.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 35.0
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 34.9
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 34.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 34.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 34.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 34.6
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 34.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 34.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 34.5
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 34.2
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 34.1
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 33.8
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 33.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 33.6
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 33.6
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 33.6
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 33.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 33.4
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 33.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 33.3
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 33.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 33.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 33.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 32.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 32.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 32.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 32.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 32.2
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 32.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 32.1
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 32.0
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 31.9
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 31.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 31.7
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 31.6
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 31.5
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 31.5
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 31.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 31.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 31.4
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 31.4
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 31.1
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 31.0
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 30.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 30.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 30.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 30.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 30.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 30.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 30.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 30.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 30.3
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 30.1
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 30.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 30.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 29.9
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 29.6
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 29.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 29.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 29.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 29.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 29.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 29.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 29.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 28.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 28.9
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 28.8
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 28.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 28.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 28.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 28.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 28.2
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 28.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 27.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 27.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 27.7
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 27.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 27.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 27.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 27.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 27.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 27.4
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 27.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 27.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 26.8
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 26.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 26.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 26.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 26.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 26.0
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 25.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 25.8
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 25.3
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 25.3
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 25.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 25.0
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 25.0
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 24.9
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 24.9
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 24.8
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 24.7
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 24.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 24.5
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 24.4
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 24.3
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 24.3
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 24.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 24.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 24.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 23.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 23.8
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 23.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 23.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 23.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 23.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 23.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 23.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 22.7
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 22.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 22.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 22.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 21.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 21.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 21.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 21.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 21.5
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 21.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 20.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 20.2
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 19.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 19.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 19.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 19.6
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 18.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 18.7
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 17.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 14.4
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

52.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 31.0
FF:10164-103B2 76 years, female 31.0
Nucleus accumbens
Scaled Tags Per Million: 52.0
FF:10037-101F1 23-56 years, mixed 52.0
Putamen
Scaled Tags Per Million: 37.7
FF:10176-103C5 60 years, female 37.7
Globus pallidus
Scaled Tags Per Million: 22.7
FF:10161-103A8 76 years, female 26.7
FF:10175-103C4 60 years, female 18.8

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

26.2
Pig sample Sample description nTPM
Caudate
nTPM: 24.0
Samples: 4

Max nTPM: 28.5
Min nTPM: 18.8
Sample A Female 18.8
Sample B Female 25.8
Sample C Male 28.5
Sample D Male 22.7
Putamen
nTPM: 24.8
Samples: 4

Max nTPM: 29.2
Min nTPM: 20.8
Sample A Female 22.3
Sample B Female 20.8
Sample C Male 26.7
Sample D Male 29.2
Septum
nTPM: 23.6
Samples: 4

Max nTPM: 29.6
Min nTPM: 21.0
Sample A Female 22.6
Sample B Female 21.0
Sample C Male 29.6
Sample D Male 21.2
Ventral pallidum
nTPM: 26.2
Samples: 4

Max nTPM: 39.1
Min nTPM: 19.1
Sample A Female 19.1
Sample B Female 21.7
Sample C Male 39.1
Sample D Male 24.8

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

53.1
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 44.2
Samples: 4

Max nTPM: 55.4
Min nTPM: 35.5
Sample A Male 42.3
Sample B Male 55.4
Sample C Female 35.5
Sample D Female 43.7
Septum
nTPM: 49.6
Samples: 4

Max nTPM: 55.5
Min nTPM: 45.1
Sample A Male 55.5
Sample B Male 47.9
Sample C Female 49.7
Sample D Female 45.1
Ventral forebrain
nTPM: 53.1
Samples: 4

Max nTPM: 58.0
Min nTPM: 50.7
Sample A Male 58.0
Sample B Male 50.8
Sample C Female 53.0
Sample D Female 50.7

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

5.7
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 5.7
73497253 Antisense, RP_051121_01_B11, Mouse strain C57BL/6J (56 days, male) 5.7
Pallidum
Expression energy: 5.0
73497253 Antisense, RP_051121_01_B11, Mouse strain C57BL/6J (56 days, male) 5.0

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