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KTN1
HPA
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  • KTN1
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

KTN1
Synonyms CG1, KIAA0004, KNT
Gene descriptioni

Full gene name according to HGNC.

Kinectin 1
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Cancer-related genes
Plasma proteins
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane, Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 14
Cytoband q22.3
Chromosome location (bp) 55559072 - 55701526
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

15
Ensembl ENSG00000126777 (version 109)
Entrez gene 3895
HGNC HGNC:6467
UniProt Q86UP2 (UniProt - Evidence at protein level)
neXtProt NX_Q86UP2
GeneCards KTN1
Antibodypedia KTN1 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Receptor for kinesin thus involved in kinesin-driven vesicle motility. Accumulates in integrin-based adhesion complexes (IAC) upon integrin aggregation by fibronectin.... show less
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes an integral membrane protein that is a member of the kinectin protein family. The encoded protein is primarily localized to the endoplasmic reticulum membrane. This protein binds kinesin and may be involved in intracellular organelle motility. This protein also binds translation elongation factor-delta and may be involved in the assembly of the elongation factor-1 complex. Alternate splicing results in multiple transcript variants of this gene. [provided by RefSeq, Aug 2012]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
KTN1-202
ENSP00000378719
ENST00000395308
Q86UP2
[Direct mapping] Kinectin
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Plasma proteins
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Translocations
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0003723 [RNA binding]
GO:0005515 [protein binding]
GO:0005783 [endoplasmic reticulum]
GO:0005788 [endoplasmic reticulum lumen]
GO:0005789 [endoplasmic reticulum membrane]
GO:0005886 [plasma membrane]
GO:0007018 [microtubule-based movement]
GO:0015031 [protein transport]
GO:0016020 [membrane]
GO:0019894 [kinesin binding]
GO:0030176 [integral component of endoplasmic reticulum membrane]
GO:0045296 [cadherin binding]
Show all
1306 aa
150.4 kDa
No 1
KTN1-203
ENSP00000378720
ENST00000395309
Q86UP2
[Direct mapping] Kinectin
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Plasma proteins
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Translocations
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0003723 [RNA binding]
GO:0005515 [protein binding]
GO:0005783 [endoplasmic reticulum]
GO:0005788 [endoplasmic reticulum lumen]
GO:0005789 [endoplasmic reticulum membrane]
GO:0005886 [plasma membrane]
GO:0007018 [microtubule-based movement]
GO:0015031 [protein transport]
GO:0016020 [membrane]
GO:0019894 [kinesin binding]
GO:0030176 [integral component of endoplasmic reticulum membrane]
GO:0045296 [cadherin binding]
Show all
1306 aa
150.4 kDa
No 1
KTN1-204
ENSP00000378722
ENST00000395311
Q86UP2
[Direct mapping] Kinectin
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Plasma proteins
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Translocations
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0003723 [RNA binding]
GO:0005515 [protein binding]
GO:0005783 [endoplasmic reticulum]
GO:0005788 [endoplasmic reticulum lumen]
GO:0005789 [endoplasmic reticulum membrane]
GO:0005886 [plasma membrane]
GO:0007018 [microtubule-based movement]
GO:0015031 [protein transport]
GO:0016020 [membrane]
GO:0019894 [kinesin binding]
GO:0030176 [integral component of endoplasmic reticulum membrane]
GO:0045296 [cadherin binding]
Show all
1306 aa
150.4 kDa
No 1
KTN1-205
ENSP00000378725
ENST00000395314
Q86UP2
[Direct mapping] Kinectin
Show all
A0A024R663
[Target identity:100%; Query identity:100%] Kinectin 1 (Kinesin receptor), isoform CRA_a; Kinectin 1 (Kinesin receptor), isoform CRA_b
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Plasma proteins
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Translocations
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0003723 [RNA binding]
GO:0005515 [protein binding]
GO:0005783 [endoplasmic reticulum]
GO:0005788 [endoplasmic reticulum lumen]
GO:0005789 [endoplasmic reticulum membrane]
GO:0005886 [plasma membrane]
GO:0007018 [microtubule-based movement]
GO:0015031 [protein transport]
GO:0016020 [membrane]
GO:0019894 [kinesin binding]
GO:0030176 [integral component of endoplasmic reticulum membrane]
GO:0045296 [cadherin binding]
Show all
1357 aa
156.3 kDa
No 1
KTN1-206
ENSP00000394992
ENST00000413890
Q86UP2
[Direct mapping] Kinectin
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Plasma proteins
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Translocations
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0003723 [RNA binding]
GO:0005515 [protein binding]
GO:0005783 [endoplasmic reticulum]
GO:0005788 [endoplasmic reticulum lumen]
GO:0005789 [endoplasmic reticulum membrane]
GO:0005886 [plasma membrane]
GO:0007018 [microtubule-based movement]
GO:0015031 [protein transport]
GO:0016020 [membrane]
GO:0019894 [kinesin binding]
GO:0030176 [integral component of endoplasmic reticulum membrane]
GO:0045296 [cadherin binding]
Show all
1306 aa
150.4 kDa
No 1
KTN1-207
ENSP00000391964
ENST00000438792
Q86UP2
[Direct mapping] Kinectin
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Plasma proteins
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Translocations
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0003723 [RNA binding]
GO:0005515 [protein binding]
GO:0005783 [endoplasmic reticulum]
GO:0005788 [endoplasmic reticulum lumen]
GO:0005789 [endoplasmic reticulum membrane]
GO:0005886 [plasma membrane]
GO:0007018 [microtubule-based movement]
GO:0015031 [protein transport]
GO:0016020 [membrane]
GO:0019894 [kinesin binding]
GO:0030176 [integral component of endoplasmic reticulum membrane]
GO:0045296 [cadherin binding]
Show all
1300 aa
149.6 kDa
No 1
KTN1-210
ENSP00000452445
ENST00000553624
G3V5P0
[Direct mapping] Kinectin
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Translocations
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0007018 [microtubule-based movement]
GO:0019894 [kinesin binding]
Show all
160 aa
18.5 kDa
No 0
KTN1-212
ENSP00000451876
ENST00000554294
H0YJP2
[Direct mapping] Kinectin
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Translocations
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0007018 [microtubule-based movement]
GO:0019894 [kinesin binding]
Show all
138 aa
15.6 kDa
No 0
KTN1-214
ENSP00000452073
ENST00000554507
G3V4Y7
[Direct mapping] Kinectin
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Translocations
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0007018 [microtubule-based movement]
GO:0019894 [kinesin binding]
Show all
595 aa
68.9 kDa
No 0
KTN1-215
ENSP00000452459
ENST00000554567
G3V5Q0
[Direct mapping] Kinectin
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Translocations
Protein evidence (Ezkurdia et al 2014)
Show all
14 aa
1.8 kDa
No 0
KTN1-216
ENSP00000452205
ENST00000554570
H0YJV5
[Direct mapping] Kinectin
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Translocations
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0007018 [microtubule-based movement]
GO:0019894 [kinesin binding]
Show all
91 aa
10.8 kDa
No 0
KTN1-218
ENSP00000452337
ENST00000554890
G3V5G2
[Direct mapping] Kinectin
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Translocations
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0007018 [microtubule-based movement]
GO:0019894 [kinesin binding]
Show all
162 aa
18.7 kDa
No 0
KTN1-221
ENSP00000451878
ENST00000555498
G3V4L8
[Direct mapping] Kinectin
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Translocations
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005783 [endoplasmic reticulum]
GO:0005789 [endoplasmic reticulum membrane]
GO:0007018 [microtubule-based movement]
GO:0015031 [protein transport]
GO:0016020 [membrane]
GO:0019894 [kinesin binding]
GO:0030176 [integral component of endoplasmic reticulum membrane]
Show all
75 aa
9 kDa
No 1
KTN1-223
ENSP00000451698
ENST00000555573
B7Z6P3
[Direct mapping] Kinectin; cDNA FLJ55573, highly similar to Kinectin
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Translocations
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0007018 [microtubule-based movement]
GO:0019894 [kinesin binding]
Show all
334 aa
38.9 kDa
No 0
KTN1-225
ENSP00000451641
ENST00000557267
G3V475
[Direct mapping] Kinectin
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Cancer-related genes
   COSMIC somatic mutations in cancer genes
   COSMIC Somatic Mutations
   COSMIC Translocations
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0005783 [endoplasmic reticulum]
GO:0005789 [endoplasmic reticulum membrane]
GO:0007018 [microtubule-based movement]
GO:0015031 [protein transport]
GO:0016020 [membrane]
GO:0019894 [kinesin binding]
GO:0030176 [integral component of endoplasmic reticulum membrane]
Show all
60 aa
7.3 kDa
No 1

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