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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:61.9 nTPM
HPA Brain:84.1 nTPM
GTEx:61.9 nTPM
FANTOM5:53.8 Scaled Tags Per Million
Pig:35.6 nTPM
Mouse:141.3 nTPM
Allen mouse:2.8 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA037658
Glial cells Not detected
Neuronal cells Low



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

84.1
Sample id Sample description nTPM
Caudate nucleus
nTPM: 70.3
2290 Female, age 72, unknown 82.7
2289 Male, age 61, right hemisphere 81.8
1781 Male, age 74, unknown 79.4
1857 Female, age 85, left hemisphere 71.2
2846 Female, age 79, unknown 66.1
2288 Male, age 75, left hemisphere 63.8
2481 Female, age 94, left hemisphere 60.7
1854 Male, age 80, left hemisphere 56.5
Globus pallidus, externus
nTPM: 34.6
2772 Female, age 79, unknown 39.2
2646 Male, age 61, right hemisphere 36.6
2567 Female, age 72, unknown 34.3
2395 Male, age 75, both hemispheres 32.8
1996 Male, age 80, right hemisphere 29.9
Globus pallidus, internus
nTPM: 30.3
2483 Female, age 94, right hemisphere 40.8
1818 Male, age 74, unknown 37.0
2287 Male, age 75, right hemisphere 32.9
2566 Female, age 72, unknown 30.6
2037 Male, age 80, right hemisphere 28.3
2111 Female, age 85, right hemisphere 21.5
2778 Female, age 91, both hemispheres 20.8
Nucleus accumbens
nTPM: 62.2
1856 Female, age 91, right hemisphere 85.2
1783 Male, age 74, unknown 82.1
1806 Female, age 85, left hemisphere 74.7
2824 Male, age 61, right hemisphere 69.5
2286 Male, age 75, left hemisphere 62.6
2698 Female, age 72, unknown 48.6
2732 Male, age 80, right hemisphere 41.1
2391 Female, age 94, left hemisphere 34.1
Nucleus basalis of Meynert
nTPM: 52.9
2484 Female, age 94, left hemisphere 72.0
2821 Male, age 75, both hemispheres 50.2
2393 Male, age 80, right hemisphere 45.0
2569 Male, age 61, both hemispheres 44.4
Nucleus of the diagonal band
nTPM: 84.1
2029 Male, age 61, right hemisphere 100.2
1812 Female, age 91, both hemispheres 89.1
2775 Male, age 80, right hemisphere 85.2
2195 Female, age 85, both hemispheres 81.4
1979 Male, age 74, unknown 64.8
Putamen
nTPM: 65.7
2647 Male, age 75, left hemisphere 74.8
1937 Female, age 91, right hemisphere 72.3
2466 Female, age 79, unknown 67.3
2489 Female, age 72, unknown 64.8
1829 Male, age 74, unknown 64.6
1838 Male, age 80, right hemisphere 63.9
2482 Female, age 94, left hemisphere 52.4
Septal nuclei
nTPM: 70.7
1960 Male, age 74, unknown 90.6
2031 Female, age 72, unknown 82.3
2009 Female, age 91, both hemispheres 79.7
2629 Female, age 94, right hemisphere 74.7
2059 Female, age 85, both hemispheres 72.9
2394 Male, age 61, left hemisphere 49.3
2199 Male, age 80, right hemisphere 45.5
Stria terminalis, bed nucleus
nTPM: 80.6
1974 Female, age 91, both hemispheres 91.5
2486 Female, age 94, both hemispheres 86.3
2201 Male, age 74, unknown 64.1

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

61.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 60.1
Samples: 246

Max nTPM: 108.0
Min nTPM: 20.9
Std nTPM: 16.6
Median nTPM: 59.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 108.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 107.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 106.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 104.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 101.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 98.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 96.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 96.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 93.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 90.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 88.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 88.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 87.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 87.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 86.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 85.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 85.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 84.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 83.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 83.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 82.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 82.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 81.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 81.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 81.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 81.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 80.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 80.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 80.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 80.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 79.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 79.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 78.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 78.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 78.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 78.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 77.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 77.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 77.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 77.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 76.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 75.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 75.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 75.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 74.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 74.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 74.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 74.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 74.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 73.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 73.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 73.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 73.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 73.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 72.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 72.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 71.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 70.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 70.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 70.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 70.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 69.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 69.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 69.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 69.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 69.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 68.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 68.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 68.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 68.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 67.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 67.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 67.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 67.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 67.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 66.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 66.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 66.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 66.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 66.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 66.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 66.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 66.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 65.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 65.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 65.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 64.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 64.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 64.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 64.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 63.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 63.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 63.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 63.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 63.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 63.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 62.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 62.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 62.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 62.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 62.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 62.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 62.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 62.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 61.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 61.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 61.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 61.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 61.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 61.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 61.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 61.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 61.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 61.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 61.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 60.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 60.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 60.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 60.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 60.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 59.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 59.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 59.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 59.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 59.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 59.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 59.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 59.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 59.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 59.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 59.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 59.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 58.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 58.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 58.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 58.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 58.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 57.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 57.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 57.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 57.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 57.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 57.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 56.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 56.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 56.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 56.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 56.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 55.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 55.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 55.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 54.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 54.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 54.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 54.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 54.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 54.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 54.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 54.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 54.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 53.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 53.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 53.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 53.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 52.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 52.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 52.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 52.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 52.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 52.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 52.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 51.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 51.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 51.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 51.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 51.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 51.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 50.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 50.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 50.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 50.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 49.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 49.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 49.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 49.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 49.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 48.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 48.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 48.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 48.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 48.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 48.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 47.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 47.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 47.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 47.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 47.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 45.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 45.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 45.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 45.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 45.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 44.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 44.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 44.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 44.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 42.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 42.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 41.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 41.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 41.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 40.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 40.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 40.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 40.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 40.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 39.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 39.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 39.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 39.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 38.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 38.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 37.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 37.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 37.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 37.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 36.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 36.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 36.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 35.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 34.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 34.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 34.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 34.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 33.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 33.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 30.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 29.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 29.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 28.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 28.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 28.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 27.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 25.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 25.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 20.9
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 61.9
Samples: 246

Max nTPM: 176.3
Min nTPM: 10.0
Std nTPM: 18.6
Median nTPM: 62.0
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 176.3
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 109.0
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 107.5
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 101.7
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 101.5
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 99.2
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 96.1
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 93.4
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 89.9
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 89.1
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 88.6
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 88.3
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 85.5
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 85.5
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 85.4
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 84.9
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 84.3
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 83.9
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 83.8
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 83.7
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 83.5
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 83.2
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 82.7
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 82.0
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 81.6
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 81.5
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 80.9
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 80.7
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 80.6
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 80.5
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 80.3
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 80.0
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 79.9
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 79.8
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 79.5
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 79.4
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 79.4
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 79.1
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 78.9
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 78.8
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 78.7
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 78.6
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 78.3
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 78.2
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 78.1
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 78.0
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 78.0
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 77.7
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 77.5
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 75.7
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 75.4
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 75.1
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 75.0
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 75.0
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 74.6
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 74.4
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 74.1
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 74.0
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 74.0
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 73.4
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 73.3
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 73.3
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 73.3
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 73.2
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 73.2
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 73.1
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 72.9
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 72.8
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 72.7
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 72.7
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 72.5
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 72.2
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 72.2
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 71.9
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 71.6
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 71.5
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 71.5
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 70.7
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 70.4
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 70.1
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 70.1
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 69.7
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 69.6
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 69.6
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 69.5
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 69.4
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 69.2
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 68.9
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 68.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 67.7
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 67.3
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 67.1
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 67.1
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 67.0
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 66.7
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 66.3
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 66.2
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 66.2
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 66.0
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 66.0
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 65.9
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 65.5
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 65.3
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 65.2
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 65.1
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 64.9
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 64.8
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 64.8
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 64.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 63.9
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 63.7
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 63.7
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 63.6
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 63.3
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 63.3
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 63.1
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 62.9
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 62.9
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 62.9
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 62.8
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 62.7
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 62.6
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 62.2
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 61.9
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 61.7
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 61.5
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 61.1
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 61.1
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 60.9
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 60.8
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 60.6
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 60.0
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 59.1
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 59.0
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 58.9
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 58.7
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 58.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 58.6
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 58.4
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 58.4
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 58.3
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 58.2
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 58.0
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 57.8
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 57.7
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 57.5
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 57.5
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 57.4
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 57.4
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 57.2
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 57.2
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 57.1
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 56.7
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 56.7
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 56.6
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 56.5
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 56.5
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 56.2
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 55.9
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 55.7
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 55.2
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 55.2
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 54.9
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 54.7
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 54.2
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 54.2
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 54.1
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 54.0
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 53.9
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 53.4
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 53.0
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 53.0
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 53.0
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 52.8
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 52.4
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 52.4
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 52.4
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 52.3
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 52.3
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 51.9
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 51.9
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 51.5
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 51.5
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 51.3
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 51.3
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 51.2
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 51.2
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 51.2
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 50.9
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 50.2
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 50.2
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 49.6
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 49.6
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 49.4
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 49.1
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 49.0
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 48.8
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 48.1
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 48.0
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 47.7
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 47.5
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 47.1
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 46.7
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 45.9
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 45.7
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 45.3
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 45.0
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 44.9
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 44.5
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 43.8
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 43.7
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 43.6
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 43.4
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 43.3
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 43.2
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 43.1
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 43.0
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 42.4
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 42.4
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 42.3
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 40.8
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 40.4
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 40.1
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 38.4
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 37.7
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 37.1
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 36.5
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 35.9
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 35.2
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 35.0
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 34.4
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 34.0
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 33.5
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 31.4
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 31.1
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 30.6
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 29.9
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 28.1
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 27.2
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 23.8
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 21.4
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 20.7
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 16.6
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 14.4
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 12.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 10.0
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Brain - Putamen (basal ganglia)
Average nTPM: 58.7
Samples: 205

Max nTPM: 112.1
Min nTPM: 15.8
Std nTPM: 15.9
Median nTPM: 57.6
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 112.1
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 102.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 94.5
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 88.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 88.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 87.1
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 86.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 85.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 85.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 84.3
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 84.2
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 84.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 82.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 82.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 81.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 81.8
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 80.9
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 80.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 80.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 80.0
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 79.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 79.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 79.1
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 77.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 77.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 77.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 77.0
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 76.3
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 75.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 75.8
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 75.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 74.7
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 74.1
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 73.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 73.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 72.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 72.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 72.8
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 72.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 72.4
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 72.3
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 72.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 71.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 71.4
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 71.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 70.8
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 70.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 70.6
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 70.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 70.5
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 70.3
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 70.2
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 70.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 70.0
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 70.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 69.1
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 69.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 68.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 68.9
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 67.8
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 67.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 67.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 67.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 67.0
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 66.6
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 66.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 66.0
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 65.8
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 65.8
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 65.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 65.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 64.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 64.6
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 64.1
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 63.8
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 63.8
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 63.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 63.5
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 63.3
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 63.2
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 63.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 63.1
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 62.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 62.7
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 62.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 62.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 62.2
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 61.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 61.5
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 61.4
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 61.3
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 61.1
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 60.9
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 60.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 60.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 60.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 59.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 59.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 59.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 59.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 59.2
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 57.8
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 57.6
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 57.5
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 57.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 57.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 57.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 57.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 57.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 56.8
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 56.1
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 55.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 55.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 55.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 55.6
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 55.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 55.5
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 55.3
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 55.1
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 55.0
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 54.9
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 54.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 54.9
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 54.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 54.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 54.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 54.4
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 54.0
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 53.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 53.2
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 52.9
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 52.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 52.5
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 52.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 52.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 51.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 51.6
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 51.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 51.3
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 51.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 50.8
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 50.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 50.3
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 50.0
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 49.9
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 49.5
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 49.4
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 49.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 49.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 49.0
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 48.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 48.7
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 48.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 48.3
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 48.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 47.9
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 47.0
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 47.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 47.0
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 46.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 46.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 46.6
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 46.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 46.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 45.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 45.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 45.0
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 44.8
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 44.4
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 44.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 44.0
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 43.7
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 43.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 43.1
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 42.9
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 42.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 42.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 41.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 41.6
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 41.6
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 41.1
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 41.0
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 40.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 40.2
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 39.6
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 39.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 38.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 38.4
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 38.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 37.1
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 36.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 35.8
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 35.1
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 32.8
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 29.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 29.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 28.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 27.7
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 27.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 27.3
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 26.2
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 22.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 22.1
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 19.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 15.8
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

53.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 43.1
FF:10164-103B2 76 years, female 43.1
Nucleus accumbens
Scaled Tags Per Million: 45.8
FF:10037-101F1 23-56 years, mixed 45.8
Putamen
Scaled Tags Per Million: 53.8
FF:10176-103C5 60 years, female 53.8
Globus pallidus
Scaled Tags Per Million: 16.4
FF:10175-103C4 60 years, female 16.4
FF:10161-103A8 76 years, female 16.3

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

35.6
Pig sample Sample description nTPM
Caudate
nTPM: 35.6
Samples: 4

Max nTPM: 42.6
Min nTPM: 30.7
Sample A Female 30.7
Sample B Female 37.0
Sample C Male 42.6
Sample D Male 32.1
Putamen
nTPM: 30.8
Samples: 4

Max nTPM: 43.7
Min nTPM: 22.4
Sample A Female 22.4
Sample B Female 25.9
Sample C Male 43.7
Sample D Male 31.3
Septum
nTPM: 33.8
Samples: 4

Max nTPM: 36.5
Min nTPM: 31.0
Sample A Female 33.7
Sample B Female 33.9
Sample C Male 36.5
Sample D Male 31.0
Ventral pallidum
nTPM: 31.2
Samples: 4

Max nTPM: 34.5
Min nTPM: 26.2
Sample A Female 30.1
Sample B Female 34.5
Sample C Male 34.1
Sample D Male 26.2

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

141.3
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 124.6
Samples: 4

Max nTPM: 170.9
Min nTPM: 88.5
Sample A Male 124.3
Sample B Male 170.9
Sample C Female 88.5
Sample D Female 114.8
Septum
nTPM: 119.1
Samples: 4

Max nTPM: 139.4
Min nTPM: 103.6
Sample A Male 139.4
Sample B Male 114.4
Sample C Female 119.0
Sample D Female 103.6
Ventral forebrain
nTPM: 141.3
Samples: 4

Max nTPM: 178.1
Min nTPM: 115.1
Sample A Male 151.4
Sample B Male 120.6
Sample C Female 178.1
Sample D Female 115.1

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.8
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 2.4
2012 Antisense, RP_040604_01_G02, Mouse strain C57BL/6J (56 days, male) 3.6
70918784 Antisense, RP_050712_04_E03, Mouse strain C57BL/6J (56 days, male) 1.1
Pallidum
Expression energy: 2.8
2012 Antisense, RP_040604_01_G02, Mouse strain C57BL/6J (56 days, male) 3.8
70918784 Antisense, RP_050712_04_E03, Mouse strain C57BL/6J (56 days, male) 1.8

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