HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:61.2 nTPM
HPA Brain:88.7 nTPM
GTEx:61.2 nTPM
FANTOM5:38.9 Scaled Tags Per Million
Pig:42.7 nTPM
Mouse:148.2 nTPM
Allen mouse:4.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA037658
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 88.7
Sample id Sample description nTPM
Hippocampus
nTPM: 80.3
2148 Female, age 91, left hemisphere 96.4
2621 Female, age 67, right hemisphere 94.2
1898 Male, age 80, left hemisphere 80.6
2529 Female, age 94, left hemisphere 73.4
1911 Female, age 85, right hemisphere 72.3
1855 Male, age 76, left hemisphere 65.1
Dentate gyrus
nTPM: 78.4
1927 Female, age 91, both hemispheres 103.6
2531 Female, age 67, both hemispheres 92.1
2530 Female, age 94, left hemisphere 84.1
2246 Female, age 85, both hemispheres 66.1
2528 Male, age 74, both hemispheres 65.5
2010 Male, age 76, both hemispheres 59.1
Entorhinal gyrus
nTPM: 80.6
2613 Female, age 94, left hemisphere 99.7
1938 Female, age 85, left hemisphere 82.8
2764 Male, age 80, right hemisphere 82.0
1787 Male, age 76, left hemisphere 80.7
2686 Male, age 75, right hemisphere 74.3
2117 Female, age 91, right hemisphere 64.1
Hippocampus, CA1
nTPM: 78.3
2749 Male, age 80, left hemisphere 106.7
2527 Male, age 74, both hemispheres 80.1
1873 Female, age 85, both hemispheres 71.2
2082 Female, age 91, right hemisphere 70.7
2045 Male, age 76, both hemispheres 63.1
Hippocampus, CA2
nTPM: 78.1
1963 Male, age 80, left hemisphere 86.9
2113 Female, age 91, right hemisphere 81.1
2437 Female, age 94, left hemisphere 81.1
1892 Male, age 76, both hemispheres 78.5
1940 Female, age 85, left hemisphere 73.9
2249 Male, age 74, both hemispheres 66.9
Hippocampus, CA3
nTPM: 86.2
2620 Female, age 94, left hemisphere 120.9
2861 Female, age 67, both hemispheres 113.1
2137 Male, age 80, left hemisphere 94.2
2436 Male, age 74, both hemispheres 70.9
1867 Male, age 76, both hemispheres 63.2
1891 Female, age 85, both hemispheres 55.1
Parahippocampal cortex
nTPM: 79.8
2245 Female, age 91, both hemispheres 106.1
2622 Female, age 67, right hemisphere 91.0
2250 Female, age 67, right hemisphere 89.8
1990 Female, age 91, right hemisphere 83.1
2693 Female, age 94, both hemispheres 79.3
1933 Female, age 85, both hemispheres 76.7
1850 Male, age 80, both hemispheres 72.4
2532 Female, age 72, left hemisphere 72.0
2692 Male, age 74, both hemispheres 64.1
2018 Male, age 76, both hemispheres 63.4
Perirhinal gyrus
nTPM: 88.7
1847 Female, age 91, left hemisphere 110.7
1794 Male, age 80, right hemisphere 96.2
2521 Female, age 94, right hemisphere 89.6
1841 Female, age 85, right hemisphere 76.3
2848 Male, age 76, right hemisphere 70.8
Subiculum
nTPM: 62.6
1977 Female, age 85, both hemispheres 70.6
2729 Female, age 91, right hemisphere 70.3
2619 Male, age 74, both hemispheres 68.5
1901 Male, age 80, both hemispheres 64.0
2438 Female, age 94, left hemisphere 53.4
2042 Male, age 76, both hemispheres 48.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 61.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 61.2
Samples: 197

Max nTPM: 227.7
Min nTPM: 7.7
Std nTPM: 30.8
Median nTPM: 58.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 227.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 144.2
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 130.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 130.7
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 130.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 126.4
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 122.4
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 116.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 113.7
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 113.7
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 113.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 38.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 38.9
FF:10153-102I9 76 years, female 39.3
FF:10169-103B7 60 years, female 38.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 42.7
Pig sample Sample description nTPM
Subiculum
nTPM: 36.7
Samples: 4

Max nTPM: 49.9
Min nTPM: 30.4
Sample A Female 49.9
Sample B Female 31.8
Sample C Male 34.7
Sample D Male 30.4
Dorsal hippocampus
nTPM: 36.4
Samples: 4

Max nTPM: 43.1
Min nTPM: 30.7
Sample A Female 43.1
Sample B Female 39.4
Sample C Male 32.2
Sample D Male 30.7
Entorhinal cortex
nTPM: 42.7
Samples: 4

Max nTPM: 46.4
Min nTPM: 38.8
Sample A Female 46.4
Sample B Female 41.4
Sample C Male 44.1
Sample D Male 38.8
Ventral hippocampus
nTPM: 37.8
Samples: 4

Max nTPM: 45.8
Min nTPM: 28.1
Sample A Female 37.0
Sample B Female 28.1
Sample C Male 45.8
Sample D Male 40.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 148.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 148.2
Samples: 4

Max nTPM: 166.6
Min nTPM: 131.7
Sample A Male 155.6
Sample B Male 166.6
Sample C Female 131.7
Sample D Female 138.8
Hippocampal formation
nTPM: 109.5
Samples: 4

Max nTPM: 128.4
Min nTPM: 91.6
Sample A Male 105.0
Sample B Male 113.0
Sample C Female 91.6
Sample D Female 128.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 4.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.3
2012 Antisense, RP_040604_01_G02, Mouse strain C57BL/6J (56 days, male) 6.5
70918784 Antisense, RP_050712_04_E03, Mouse strain C57BL/6J (56 days, male) 2.2

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