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  • HP1BP3
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: High
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:71.0 nTPM
HPA Brain:187.8 nTPM
GTEx:71.0 nTPM
FANTOM5:164.6 Scaled Tags Per Million
Pig:78.1 nTPM
Mouse:140.3 nTPM
Allen mouse:14.9 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA028215
Glial cells High
Neuronal cells Low



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

187.8
Sample id Sample description nTPM
Caudate nucleus
nTPM: 175.5
2289 Male, age 61, right hemisphere 196.7
2288 Male, age 75, left hemisphere 184.7
1854 Male, age 80, left hemisphere 177.6
1857 Female, age 85, left hemisphere 176.8
2290 Female, age 72, unknown 176.2
2846 Female, age 79, unknown 166.7
1781 Male, age 74, unknown 164.4
2481 Female, age 94, left hemisphere 161.1
Globus pallidus, externus
nTPM: 186.8
2646 Male, age 61, right hemisphere 210.0
2567 Female, age 72, unknown 192.5
1996 Male, age 80, right hemisphere 187.4
2395 Male, age 75, both hemispheres 176.9
2772 Female, age 79, unknown 167.4
Globus pallidus, internus
nTPM: 187.8
2111 Female, age 85, right hemisphere 223.0
2778 Female, age 91, both hemispheres 204.0
2566 Female, age 72, unknown 198.8
1818 Male, age 74, unknown 177.2
2483 Female, age 94, right hemisphere 174.7
2287 Male, age 75, right hemisphere 169.0
2037 Male, age 80, right hemisphere 167.7
Nucleus accumbens
nTPM: 181.1
2824 Male, age 61, right hemisphere 204.8
2391 Female, age 94, left hemisphere 199.3
2286 Male, age 75, left hemisphere 187.4
2698 Female, age 72, unknown 180.6
2732 Male, age 80, right hemisphere 178.9
1783 Male, age 74, unknown 176.4
1806 Female, age 85, left hemisphere 169.3
1856 Female, age 91, right hemisphere 152.2
Nucleus basalis of Meynert
nTPM: 185.4
2569 Male, age 61, both hemispheres 199.6
2821 Male, age 75, both hemispheres 185.8
2484 Female, age 94, left hemisphere 184.6
2393 Male, age 80, right hemisphere 171.6
Nucleus of the diagonal band
nTPM: 150.9
1979 Male, age 74, unknown 172.7
2029 Male, age 61, right hemisphere 152.2
2195 Female, age 85, both hemispheres 149.7
2775 Male, age 80, right hemisphere 143.5
1812 Female, age 91, both hemispheres 136.5
Putamen
nTPM: 173.3
2647 Male, age 75, left hemisphere 194.1
2482 Female, age 94, left hemisphere 186.8
1838 Male, age 80, right hemisphere 172.6
1937 Female, age 91, right hemisphere 170.2
1829 Male, age 74, unknown 165.9
2466 Female, age 79, unknown 163.0
2489 Female, age 72, unknown 160.2
Septal nuclei
nTPM: 155.0
2394 Male, age 61, left hemisphere 178.8
2199 Male, age 80, right hemisphere 169.5
2059 Female, age 85, both hemispheres 156.8
2629 Female, age 94, right hemisphere 155.6
2009 Female, age 91, both hemispheres 144.6
1960 Male, age 74, unknown 141.5
2031 Female, age 72, unknown 138.3
Stria terminalis, bed nucleus
nTPM: 159.5
2486 Female, age 94, both hemispheres 162.6
2201 Male, age 74, unknown 160.9
1974 Female, age 91, both hemispheres 154.9

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

71.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 71.0
Samples: 246

Max nTPM: 129.3
Min nTPM: 42.3
Std nTPM: 11.7
Median nTPM: 70.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 129.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 104.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 101.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 98.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 98.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 98.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 94.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 94.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 92.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 92.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 91.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 90.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 90.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 89.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 88.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 88.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 87.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 87.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 87.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 87.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 86.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 86.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 86.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 86.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 86.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 85.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 85.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 85.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 84.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 83.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 83.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 83.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 83.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 82.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 82.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 82.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 82.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 81.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 81.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 81.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 81.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 81.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 81.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 80.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 80.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 80.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 80.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 80.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 80.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 80.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 80.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 80.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 80.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 80.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 79.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 79.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 79.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 78.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 78.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 78.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 78.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 78.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 77.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 77.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 77.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 77.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 76.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 76.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 76.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 76.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 76.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 75.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 75.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 75.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 75.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 75.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 75.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 75.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 75.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 75.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 75.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 75.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 75.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 75.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 74.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 74.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 74.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 74.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 74.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 74.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 74.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 73.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 73.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 73.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 73.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 73.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 73.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 73.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 72.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 72.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 72.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 72.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 72.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 72.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 72.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 72.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 72.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 72.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 72.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 72.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 72.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 72.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 71.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 71.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 71.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 71.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 71.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 71.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 71.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 71.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 71.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 71.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 70.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 70.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 70.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 70.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 70.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 70.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 70.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 70.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 70.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 70.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 69.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 69.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 69.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 69.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 69.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 69.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 69.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 69.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 68.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 68.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 68.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 68.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 68.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 68.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 68.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 68.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 68.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 68.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 68.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 68.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 67.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 67.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 67.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 67.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 67.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 67.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 66.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 66.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 66.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 66.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 66.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 66.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 66.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 66.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 66.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 65.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 65.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 65.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 65.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 65.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 65.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 65.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 64.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 64.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 64.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 64.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 64.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 64.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 64.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 63.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 63.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 63.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 63.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 63.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 63.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 63.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 63.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 62.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 62.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 62.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 61.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 61.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 61.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 61.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 61.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 60.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 60.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 60.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 60.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 60.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 60.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 60.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 60.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 59.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 59.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 59.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 59.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 59.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 59.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 58.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 58.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 58.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 57.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 57.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 57.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 57.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 57.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 56.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 56.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 55.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 55.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 55.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 55.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 54.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 54.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 54.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 54.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 54.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 53.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 53.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 53.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 53.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 52.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 52.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 52.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 52.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 49.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 49.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 48.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 47.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 47.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 46.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 43.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 42.3
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 67.6
Samples: 246

Max nTPM: 123.8
Min nTPM: 40.5
Std nTPM: 12.2
Median nTPM: 67.8
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 123.8
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 111.3
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 108.3
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 97.4
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 94.8
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 94.1
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 92.0
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 86.5
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 86.4
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 86.1
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 85.9
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 85.1
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 84.4
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 84.3
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 84.3
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 84.3
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 84.2
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 83.8
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 83.6
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 83.3
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 83.1
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 82.8
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 82.6
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 82.5
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 82.5
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 82.4
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 82.4
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 81.7
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 81.5
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 81.5
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 80.8
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 80.7
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 80.3
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 80.3
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 79.6
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 79.4
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 79.3
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 79.1
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 78.9
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 78.9
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 78.7
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 78.6
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 78.3
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 78.3
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 78.2
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 77.8
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 77.3
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 77.3
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 77.2
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 77.1
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 76.8
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 76.7
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 76.5
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 76.4
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 76.4
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 75.9
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 75.7
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 75.7
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 75.6
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 75.6
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 75.5
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 75.4
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 75.3
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 75.3
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 75.1
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 74.8
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 74.5
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 74.3
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 74.1
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 73.9
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 73.9
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 73.9
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 73.3
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 73.3
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 73.2
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 73.2
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 73.2
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 73.1
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 73.1
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 73.0
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 72.9
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 72.9
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 72.8
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 72.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 72.7
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 72.6
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 72.6
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 72.4
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 72.4
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 72.2
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 72.1
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 72.0
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 71.9
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 71.8
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 71.6
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 71.4
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 71.3
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 71.3
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 71.2
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 71.2
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 71.2
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 71.1
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 71.0
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 70.9
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 70.7
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 70.6
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 70.5
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 69.9
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 69.8
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 69.6
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 69.5
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 69.3
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 69.3
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 69.2
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 69.0
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 69.0
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 68.8
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 68.7
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 68.6
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 68.1
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 68.0
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 68.0
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 67.9
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 67.8
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 67.7
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 67.6
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 67.6
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 67.4
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 67.1
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 66.9
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 66.8
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 66.6
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 66.5
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 66.0
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 66.0
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 65.7
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 65.6
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 65.5
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 65.4
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 64.7
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 64.6
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 64.6
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 64.6
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 64.4
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 64.4
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 64.3
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 64.2
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 64.1
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 64.1
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 64.1
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 63.8
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 63.6
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 63.6
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 63.6
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 63.5
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 63.4
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 63.3
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 62.9
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 62.5
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 62.5
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 62.3
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 62.2
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 62.0
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 61.5
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 61.2
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 61.0
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 61.0
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 60.9
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 60.6
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 60.5
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 60.5
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 60.4
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 60.3
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 60.3
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 60.3
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 59.8
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 59.6
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 59.6
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 59.2
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 59.2
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 59.1
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 59.0
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 58.8
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 58.8
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 58.8
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 58.5
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 58.5
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 58.4
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 58.4
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 58.3
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 58.2
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 58.1
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 57.9
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 57.7
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 57.7
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 57.5
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 57.3
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 57.2
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 57.1
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 56.6
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 56.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 56.1
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 56.1
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 56.0
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 55.7
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 55.6
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 55.5
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 55.2
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 54.9
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 54.8
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 54.8
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 54.6
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 54.2
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 53.8
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 53.7
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 53.7
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 53.6
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 53.6
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 53.5
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 53.2
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 52.9
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 52.6
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 52.6
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 52.5
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 51.8
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 51.3
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 51.2
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 50.9
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 50.7
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 50.5
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 50.4
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 50.0
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 49.6
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 49.4
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 47.3
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 47.1
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 47.0
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 46.9
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 46.3
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 45.3
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 44.9
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 44.0
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 43.6
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 43.5
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 42.1
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 40.5
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Brain - Putamen (basal ganglia)
Average nTPM: 64.2
Samples: 205

Max nTPM: 111.5
Min nTPM: 42.7
Std nTPM: 10.6
Median nTPM: 62.3
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 111.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 94.8
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 94.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 92.6
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 90.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 87.4
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 85.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 85.1
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 84.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 84.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 82.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 81.9
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 80.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 79.7
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 79.6
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 79.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 78.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 78.7
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 78.7
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 78.6
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 78.3
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 78.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 78.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 77.6
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 77.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 77.3
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 77.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 76.2
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 76.1
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 76.0
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 75.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 75.3
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 74.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 74.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 74.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 74.3
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 74.2
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 74.2
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 74.1
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 73.3
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 73.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 72.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 72.4
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 71.5
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 71.4
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 71.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 71.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 71.2
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 70.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 70.7
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 70.3
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 70.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 70.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 70.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 69.9
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 69.7
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 69.7
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 69.7
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 69.5
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 69.5
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 69.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 69.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 69.2
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 68.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 67.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 67.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 67.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 67.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 66.7
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 66.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 66.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 66.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 66.0
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 65.9
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 65.8
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 65.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 65.6
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 65.6
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 65.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 65.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 64.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 64.8
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 64.8
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 64.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 64.5
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 64.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 64.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 64.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 63.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 63.8
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 63.7
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 63.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 63.1
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 62.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 62.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 62.9
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 62.7
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 62.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 62.5
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 62.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 62.4
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 62.3
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 62.3
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 62.2
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 62.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 62.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 62.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 62.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 61.9
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 61.9
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 61.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 61.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 61.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 61.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 61.6
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 61.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 61.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 61.3
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 61.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 61.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 61.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 61.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 60.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 60.8
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 60.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 60.4
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 60.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 60.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 60.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 60.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 60.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 60.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 59.7
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 59.6
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 59.5
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 59.5
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 59.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 59.2
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 58.8
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 58.7
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 58.4
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 58.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 58.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 58.0
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 58.0
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 58.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 57.8
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 57.8
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 57.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 57.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 57.3
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 57.2
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 57.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 56.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 56.8
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 56.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 56.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 56.5
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 56.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 56.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 56.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 56.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 56.0
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 55.7
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 55.6
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 55.5
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 55.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 55.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 55.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 55.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 55.1
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 55.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 54.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 54.6
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 54.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 54.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 53.6
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 53.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 53.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 52.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 52.4
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 52.4
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 52.3
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 52.2
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 52.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 52.0
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 51.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 51.7
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 51.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 51.1
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 50.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 49.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 49.1
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 48.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 48.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 48.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 47.8
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 47.4
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 45.7
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 45.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 44.9
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 44.7
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 44.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 44.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 42.7
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

164.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 164.6
FF:10164-103B2 76 years, female 164.6
Nucleus accumbens
Scaled Tags Per Million: 127.5
FF:10037-101F1 23-56 years, mixed 127.5
Putamen
Scaled Tags Per Million: 138.7
FF:10176-103C5 60 years, female 138.7
Globus pallidus
Scaled Tags Per Million: 160.6
FF:10161-103A8 76 years, female 187.8
FF:10175-103C4 60 years, female 133.4

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

78.1
Pig sample Sample description nTPM
Caudate
nTPM: 72.6
Samples: 4

Max nTPM: 81.3
Min nTPM: 67.0
Sample A Female 74.2
Sample B Female 68.0
Sample C Male 81.3
Sample D Male 67.0
Putamen
nTPM: 75.5
Samples: 4

Max nTPM: 87.0
Min nTPM: 66.2
Sample A Female 75.1
Sample B Female 66.2
Sample C Male 87.0
Sample D Male 73.7
Septum
nTPM: 78.2
Samples: 4

Max nTPM: 86.8
Min nTPM: 73.2
Sample A Female 86.8
Sample B Female 73.2
Sample C Male 78.7
Sample D Male 74.0
Ventral pallidum
nTPM: 74.2
Samples: 4

Max nTPM: 79.1
Min nTPM: 70.6
Sample A Female 79.1
Sample B Female 72.2
Sample C Male 70.6
Sample D Male 74.9

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

140.3
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 140.4
Samples: 4

Max nTPM: 142.9
Min nTPM: 135.2
Sample A Male 140.9
Sample B Male 142.9
Sample C Female 142.5
Sample D Female 135.2
Septum
nTPM: 123.5
Samples: 4

Max nTPM: 136.5
Min nTPM: 111.1
Sample A Male 136.5
Sample B Male 115.1
Sample C Female 111.1
Sample D Female 131.4
Ventral forebrain
nTPM: 134.4
Samples: 4

Max nTPM: 143.7
Min nTPM: 117.2
Sample A Male 143.7
Sample B Male 137.3
Sample C Female 117.2
Sample D Female 139.5

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

14.9
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 14.9
81599666 Antisense, RP_071219_02_F03, Mouse strain C57BL/6J (56 days, male) 14.9
Pallidum
Expression energy: 13.7
81599666 Antisense, RP_071219_02_F03, Mouse strain C57BL/6J (56 days, male) 13.7

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