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GFER
HPA
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  • SUMMARY

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  • BRAIN

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  • GFER
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

GFER
Synonyms ALR, ERV1, HERV1, HPO1, HPO2, HSS
Gene descriptioni

Full gene name according to HGNC.

Growth factor, augmenter of liver regeneration
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Enzymes
Potential drug targets
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Secreted, Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 16
Cytoband p13.3
Chromosome location (bp) 1984193 - 1987749
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

4
Ensembl ENSG00000127554 (version 109)
Entrez gene 2671
HGNC HGNC:4236
UniProt P55789 (UniProt - Evidence at protein level)
neXtProt NX_P55789
GeneCards GFER
Antibodypedia GFER antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

[Isoform 1]: FAD-dependent sulfhydryl oxidase that regenerates the redox-active disulfide bonds in CHCHD4/MIA40, a chaperone essential for disulfide bond formation and protein folding in the mitochondrial intermembrane space. The reduced form of CHCHD4/MIA40 forms a transient intermolecular disulfide bridge with GFER/ERV1, resulting in regeneration of the essential disulfide bonds in CHCHD4/MIA40, while GFER/ERV1 becomes re-oxidized by donating electrons to cytochrome c or molecular oxygen.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Growth factor, Oxidoreductase
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

FAD, Flavoprotein
Gene summary (Entrez)i

Useful information about the gene from Entrez

The hepatotrophic factor designated augmenter of liver regeneration (ALR) is thought to be one of the factors responsible for the extraordinary regenerative capacity of mammalian liver. It has also been called hepatic regenerative stimulation substance (HSS). The gene resides on chromosome 16 in the interval containing the locus for polycystic kidney disease (PKD1). The putative gene product is 42% similar to the scERV1 protein of yeast. The yeast scERV1 gene had been found to be essential for oxidative phosphorylation, the maintenance of mitochondrial genomes, and the cell division cycle. The human gene is both the structural and functional homolog of the yeast scERV1 gene. [provided by RefSeq, Jul 2008]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
GFER-201
ENSP00000248114
ENST00000248114
P55789
[Direct mapping] FAD-linked sulfhydryl oxidase ALR
Show all
Enzymes
   ENZYME proteins
   Oxidoreductases
Predicted secreted proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Potential drug targets
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001889 [liver development]
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0005615 [extracellular space]
GO:0005737 [cytoplasm]
GO:0005739 [mitochondrion]
GO:0005758 [mitochondrial intermembrane space]
GO:0005829 [cytosol]
GO:0007165 [signal transduction]
GO:0008083 [growth factor activity]
GO:0015035 [protein-disulfide reductase activity]
GO:0016491 [oxidoreductase activity]
GO:0016971 [flavin-linked sulfhydryl oxidase activity]
GO:0016972 [thiol oxidase activity]
GO:0032496 [response to lipopolysaccharide]
GO:0043066 [negative regulation of apoptotic process]
GO:0045953 [negative regulation of natural killer cell mediated cytotoxicity]
GO:0050660 [flavin adenine dinucleotide binding]
GO:0071222 [cellular response to lipopolysaccharide]
GO:0071356 [cellular response to tumor necrosis factor]
GO:0072717 [cellular response to actinomycin D]
GO:0097237 [cellular response to toxic substance]
GO:0097421 [liver regeneration]
GO:1903204 [negative regulation of oxidative stress-induced neuron death]
GO:2000573 [positive regulation of DNA biosynthetic process]
Show all
205 aa
23.4 kDa
No 0
GFER-202
ENSP00000456189
ENST00000561710
H3BRD2
[Direct mapping] Sulfhydryl oxidase
Show all
Predicted secreted proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005739 [mitochondrion]
GO:0005829 [cytosol]
GO:0016491 [oxidoreductase activity]
GO:0016971 [flavin-linked sulfhydryl oxidase activity]
GO:0016972 [thiol oxidase activity]
Show all
139 aa
15.8 kDa
No 0
GFER-204
ENSP00000455885
ENST00000567719
H3BQQ4
[Direct mapping] Sulfhydryl oxidase
Show all
Predicted secreted proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005739 [mitochondrion]
GO:0005829 [cytosol]
GO:0016491 [oxidoreductase activity]
GO:0016971 [flavin-linked sulfhydryl oxidase activity]
GO:0016972 [thiol oxidase activity]
Show all
130 aa
15.4 kDa
No 0
GFER-205
ENSP00000456432
ENST00000569451
H3BRW3
[Direct mapping] FAD-linked sulfhydryl oxidase ALR
Show all
Predicted secreted proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005739 [mitochondrion]
GO:0005829 [cytosol]
GO:0016971 [flavin-linked sulfhydryl oxidase activity]
Show all
109 aa
11.7 kDa
No 0

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