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GNG13
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BRAIN CEREBELLUM Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Bergmann glia - cytoplasm/membrane: Not detected
Bergmann glia - nucleus: Not detected
GLUC cells - cytoplasm/membrane: Not detected
GLUC cells - nucleus: Not detected
Granular cells - cytoplasm/membrane: Not detected
Granular cells - nucleus: Not detected
Molecular layer - neuropil: Not detected
Molecular layer cells - cytoplasm/membrane: Not detected
Molecular layer cells - nucleus: Not detected
Processes in granular layer: Not detected
Processes in molecular layer: Not detected
Processes in white matter: Not detected
Purkinje cells - cytoplasm/membrane: Low
Purkinje cells - dendrites: High
Purkinje cells - nucleus: Not detected
Synaptic glomeruli - capsule: Not detected
Synaptic glomeruli - core: Not detected
White matter cells - cytoplasm/membrane: Not detected
White matter cells - nucleus: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:61.9 nTPM
HPA Brain:112.2 nTPM
GTEx:61.9 nTPM
FANTOM5:241.6 Scaled Tags Per Million
Pig:27.0 nTPM
Mouse:940.1 nTPM
Allen mouse:6.3 Expression energy

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA046272
Bergmann glia - cytoplasm/membrane Not detected
Bergmann glia - nucleus Not detected
GLUC cells - cytoplasm/membrane Not detected
GLUC cells - nucleus Not detected
Purkinje cells - cytoplasm/membrane Low
Purkinje cells - dendrites High
Purkinje cells - nucleus Not detected
Granular cells - cytoplasm/membrane Not detected
Granular cells - nucleus Not detected
Molecular layer - neuropil Not detected
Molecular layer cells - cytoplasm/membrane Not detected
Molecular layer cells - nucleus Not detected
Processes in granular layer Not detected
Processes in molecular layer Not detected
Processes in white matter Not detected
Synaptic glomeruli - capsule Not detected
Synaptic glomeruli - core Not detected
White matter cells - cytoplasm/membrane Not detected
White matter cells - nucleus Not detected



CEREBELLUM - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

112.2
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 112.2
1769 Male, age 76, right hemisphere 202.6
1774 Male, age 80, left hemisphere 179.8
1768 Female, age 72, unknown 136.0
2055 Female, age 91, right hemisphere 122.6
2101 Male, age 74, right hemisphere 100.4
2006 Male, age 61, right hemisphere 76.8
1788 Male, age 55, unknown 53.2
2003 Female, age 85, right hemisphere 26.0
Cerebellar nuclei
nTPM: 18.5
2318 Male, age 74, left hemisphere 62.7
2175 Male, age 61, right hemisphere 22.0
2005 Male, age 80, left hemisphere 17.3
2177 Female, age 85, both hemispheres 13.9
2783 Female, age 72, unknown 11.6
1871 Male, age 74, unknown 11.1
2882 Male, age 76, left hemisphere 10.4
1966 Female, age 91, left hemisphere 10.2
1879 Male, age 55, unknown 7.0
Flocculonodular lobe
nTPM: 106.2
2176 Female, age 91, right hemisphere 179.5
1767 Male, age 76, left hemisphere 130.9
1765 Male, age 55, unknown 129.7
1771 Male, age 80, left hemisphere 127.4
1835 Female, age 85, right hemisphere 70.8
1792 Male, age 74, unknown 65.6
2004 Male, age 61, right hemisphere 39.6
Vermis
nTPM: 109.5
1778 Female, age 91, left hemisphere 282.6
1770 Male, age 76, left hemisphere 174.7
2834 Male, age 80, left hemisphere 114.7
1751 Male, age 74, right hemisphere 106.7
1766 Male, age 55, unknown 101.6
1825 Male, age 74, unknown 83.8
1928 Female, age 72, unknown 60.1
1988 Female, age 85, left hemisphere 59.1
2460 Male, age 61, both hemispheres 2.5

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

61.9
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 30.5
Samples: 215

Max nTPM: 135.5
Min nTPM: 0.4
Std nTPM: 26.1
Median nTPM: 23.5
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 135.5
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 134.9
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 97.4
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 94.8
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 88.8
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 88.6
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 88.4
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 85.6
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 83.9
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 83.8
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 82.7
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 82.4
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 79.9
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 79.7
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 77.4
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 76.5
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 76.3
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 75.0
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 74.9
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 74.5
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 73.0
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 70.0
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 69.2
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 67.8
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 67.2
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 65.0
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 64.9
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 63.6
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 62.7
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 62.1
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 60.8
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 60.7
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 58.4
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 58.3
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 58.3
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 57.6
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 57.0
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 56.0
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 55.6
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 54.6
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 52.3
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 52.2
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 50.3
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 50.2
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 50.0
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 49.9
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 49.9
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 47.6
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 46.7
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 46.3
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 45.8
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 45.4
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 44.6
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 44.5
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 44.0
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 43.9
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 43.6
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 42.6
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 42.5
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 41.6
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 41.0
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 40.3
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 40.2
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 40.0
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 39.5
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 39.5
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 38.4
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 38.0
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 37.9
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 36.9
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 36.7
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 36.5
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 36.4
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 35.8
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 35.4
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 35.4
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 35.3
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 34.9
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 33.2
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 31.8
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 31.7
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 31.7
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 31.0
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 30.7
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 30.6
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 29.8
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 29.5
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 29.1
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 29.1
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 28.9
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 28.7
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 27.8
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 27.3
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 27.2
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 26.8
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 26.5
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 26.3
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 26.0
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 25.5
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 25.3
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 25.1
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 25.0
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 24.8
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 24.2
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 24.1
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 23.6
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 23.6
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 23.5
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 23.4
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 22.7
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 22.5
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 22.1
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 22.0
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 21.4
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 21.1
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 21.1
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 20.8
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 20.8
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 20.4
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 20.2
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 19.9
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 19.3
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 19.1
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 19.0
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 18.6
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 18.4
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 18.1
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 18.0
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 17.9
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 17.8
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 17.3
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 17.3
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 17.0
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 17.0
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 16.8
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 15.9
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 15.6
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 15.4
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 15.3
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 15.2
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 14.9
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 14.8
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 14.1
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 13.9
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 13.6
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 13.5
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 13.5
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 13.2
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 12.0
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 11.6
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 11.6
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 11.4
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 10.8
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 10.6
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 10.5
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 10.3
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 10.0
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 9.9
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 9.8
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 9.5
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 9.1
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 8.6
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 8.3
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 8.2
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 8.0
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 7.8
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 7.5
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 7.4
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 7.4
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 7.2
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 7.1
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 7.1
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 7.0
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 7.0
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 7.0
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 7.0
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 7.0
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 6.9
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 6.7
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 6.6
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 6.6
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 6.5
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 6.4
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 6.3
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 5.9
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 5.9
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 5.9
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 5.6
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 5.5
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 5.5
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 5.0
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 4.4
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 4.0
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 3.8
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 3.6
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 3.3
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 3.2
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 3.1
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 2.8
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 2.7
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 2.6
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 2.6
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 2.6
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 2.5
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 2.4
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 2.3
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 2.2
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 2.2
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 2.2
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 2.0
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 1.9
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 1.2
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 1.2
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 1.0
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 0.4
Show allShow less
Brain - Cerebellum
Average nTPM: 61.9
Samples: 241

Max nTPM: 156.7
Min nTPM: 1.2
Std nTPM: 31.9
Median nTPM: 61.1
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 156.7
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 151.0
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 149.8
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 148.7
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 136.1
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 133.4
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 131.7
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 129.7
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 126.3
GTEX-144GL-2926-SM-5O99F 50-59 years, male 125.3
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 124.8
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 119.2
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 117.2
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 113.8
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 113.4
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 112.4
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 112.1
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 111.8
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 110.9
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 107.9
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 107.7
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 106.2
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 105.4
GTEX-RU72-2926-SM-2TF66 50-59 years, female 104.9
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 103.3
GTEX-145LS-3026-SM-5O99S 60-69 years, female 102.5
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 101.4
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 100.8
GTEX-13112-2926-SM-5DUWT 50-59 years, male 99.5
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 98.8
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 95.7
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 94.0
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 93.6
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 93.6
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 93.3
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 93.0
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 92.1
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 91.9
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 91.4
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 91.2
GTEX-15G19-2826-SM-6M48K 60-69 years, male 91.1
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 91.0
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 90.7
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 90.4
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 90.4
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 90.3
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 90.1
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 89.2
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 89.1
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 88.8
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 88.5
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 87.1
GTEX-14ABY-3026-SM-664NE 50-59 years, male 86.4
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 86.2
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 85.2
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 84.7
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 84.2
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 81.8
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 81.4
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 80.1
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 79.8
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 79.6
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 79.4
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 79.2
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 79.2
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 78.9
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 78.8
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 78.6
GTEX-12126-0926-SM-5FQTW 20-29 years, male 78.5
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 78.5
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 78.2
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 78.2
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 77.1
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 76.7
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 76.5
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 76.4
GTEX-11ONC-3026-SM-5985W 60-69 years, male 75.4
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 75.3
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 74.3
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 73.5
GTEX-17EVP-2926-SM-793BU 40-49 years, male 73.0
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 72.8
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 72.7
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 72.6
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 72.3
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 72.0
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 71.9
GTEX-1B933-3026-SM-731DB 50-59 years, female 71.6
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 71.2
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 70.6
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 70.3
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 69.7
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 69.1
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 69.0
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 68.8
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 68.5
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 68.4
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 68.4
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 68.1
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 68.1
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 68.0
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 67.9
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 67.8
GTEX-14E6D-2926-SM-664OP 50-59 years, male 67.4
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 67.2
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 66.6
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 66.0
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 65.4
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 65.3
GTEX-17HII-2926-SM-79OMK 50-59 years, male 65.2
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 65.1
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 64.9
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 64.4
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 64.2
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 63.9
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 63.5
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 62.8
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 62.8
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 62.4
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 61.4
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 61.1
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 60.6
GTEX-1192X-3226-SM-5987D 50-59 years, male 60.1
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 59.8
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 59.2
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 58.8
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 58.1
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 58.0
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 58.0
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 57.8
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 57.4
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 57.1
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 56.8
GTEX-WL46-2826-SM-3LK81 50-59 years, male 56.1
GTEX-11DYG-2926-SM-5H132 60-69 years, male 56.0
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 55.9
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 55.6
GTEX-18465-2926-SM-7KFSE 50-59 years, male 55.3
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 55.3
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 54.7
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 54.5
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 54.2
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 53.7
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 53.7
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 52.5
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 52.0
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 51.9
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 51.9
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 51.6
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 51.5
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 51.3
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 50.9
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 50.1
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 49.9
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 49.4
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 49.3
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 48.3
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 47.5
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 47.5
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 46.7
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 45.6
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 44.6
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 44.5
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 44.2
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 43.8
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 43.6
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 43.6
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 43.4
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 43.2
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 43.1
GTEX-X261-3126-SM-4PQZC 50-59 years, male 42.9
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 42.8
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 42.7
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 42.5
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 40.7
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 40.6
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 40.6
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 40.5
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 40.3
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 39.7
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 39.0
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 38.5
GTEX-11NUK-3026-SM-5986K 50-59 years, male 38.4
GTEX-14PN4-3026-SM-664O4 50-59 years, male 37.3
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 37.2
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 36.9
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 34.7
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 34.5
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 34.1
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 33.1
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 33.0
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 33.0
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 32.8
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 32.4
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 32.2
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 32.0
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 32.0
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 31.8
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 31.7
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 31.3
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 31.0
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 30.9
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 30.8
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 30.2
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 29.6
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 29.4
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 28.9
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 28.9
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 27.7
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 26.8
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 25.2
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 24.5
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 24.4
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 23.4
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 22.8
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 22.6
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 22.3
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 21.6
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 20.9
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 20.0
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 19.9
GTEX-11EI6-2926-SM-5985U 60-69 years, male 19.7
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 19.3
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 16.6
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 15.9
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 15.1
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 14.3
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 12.5
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 9.0
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 7.1
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 7.0
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 6.5
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 6.5
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 5.7
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 5.2
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 3.8
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 2.1
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 1.7
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 1.4
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 1.3
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 1.2
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CEREBELLUM - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

241.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Cerebellum
Scaled Tags Per Million: 241.6
FF:10166-103B4 76 years, female 300.4
FF:10083-102B2 22-68 years, mixed 182.8

CEREBELLUM - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

27.0
Pig sample Sample description nTPM
Cerebellum
nTPM: 27.0
Samples: 4

Max nTPM: 50.6
Min nTPM: 18.1
Sample A Female 50.6
Sample B Female 18.1
Sample C Male 18.2
Sample D Male 21.0

CEREBELLUM - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

940.1
Mouse sample Sample description nTPM
Cerebellum
nTPM: 940.1
Samples: 4

Max nTPM: 1041.3
Min nTPM: 830.8
Sample A Male 996.8
Sample B Male 1041.3
Sample C Female 891.6
Sample D Female 830.8

CEREBELLUM - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

6.3
Allen experiment id Experiment description Expression energy
Cerebellum
Expression energy: 6.3
73615561 Antisense, RP_050705_01_B03, Mouse strain C57BL/6J (56 days, male) 6.3
70723459 Antisense, RP_050705_01_B03, Mouse strain C57BL/6J (56 days, male) 5.6

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