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METTL16
HPA
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  • METTL16
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

METTL16
Synonyms METT10D, MGC3329
Gene descriptioni

Full gene name according to HGNC.

Methyltransferase 16, N6-methyladenosine
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Enzymes
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 17
Cytoband p13.3
Chromosome location (bp) 2405562 - 2511891
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

2
Ensembl ENSG00000127804 (version 109)
Entrez gene 79066
HGNC HGNC:28484
UniProt Q86W50 (UniProt - Evidence at protein level)
neXtProt NX_Q86W50
GeneCards METTL16
Antibodypedia METTL16 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

RNA N6-methyltransferase that methylates adenosine residues at the N(6) position of a subset of RNAs and is involved in S-adenosyl-L-methionine homeostasis by regulating expression of MAT2A transcripts 1, 2, 3, 4, 5. Able to N6-methylate a subset of mRNAs and U6 small nuclear RNAs (U6 snRNAs) 6. In contrast to the METTL3-METTL14 heterodimer, only able to methylate a limited number of RNAs: requires both a 5'UACAGAGAA-3' nonamer sequence and a specific RNA structure 7, 8, 9. Plays a key role in S-adenosyl-L-methionine homeostasis by mediating N6-methylation of MAT2A mRNAs, altering splicing of MAT2A transcripts: in presence of S-adenosyl-L-methionine, binds the 3'-UTR region of MAT2A mRNA and specifically N6-methylates the first hairpin of MAT2A mRNA, preventing recognition of their 3'-splice site by U2AF1/U2AF35, thereby inhibiting splicing and protein production of S-adenosylmethionine synthase 10, 11. In S-adenosyl-L-methionine-limiting conditions, binds the 3'-UTR region of MAT2A mRNA but stalls due to the lack of a methyl donor, preventing N6-methylation and promoting expression of MAT2A 12. In addition to mRNAs, also able to mediate N6-methylation of U6 small nuclear RNA (U6 snRNA): specifically N6-methylates adenine in position 43 of U6 snRNAs 13, 14, 15. Also able to bind various lncRNAs, such as 7SK snRNA (7SK RNA) or 7SL RNA 16. Specifically binds the 3'-end of the MALAT1 long non-coding RNA 17.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Methyltransferase, RNA-binding, Transferase
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

S-adenosyl-L-methionine
Gene summary (Entrez)i

Useful information about the gene from Entrez

Enables RNA binding activity and RNA methyltransferase activity. Involved in RNA modification and regulation of mRNA metabolic process. Located in cytoplasm and nucleus. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
METTL16-201
ENSP00000263092
ENST00000263092
Q86W50
[Direct mapping] RNA N6-adenosine-methyltransferase METTL16
Show all
Enzymes
   ENZYME proteins
   Transferases
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0001734 [mRNA (N6-adenosine)-methyltransferase activity]
GO:0003723 [RNA binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0006402 [mRNA catabolic process]
GO:0006556 [S-adenosylmethionine biosynthetic process]
GO:0006725 [cellular aromatic compound metabolic process]
GO:0008168 [methyltransferase activity]
GO:0010608 [post-transcriptional regulation of gene expression]
GO:0016740 [transferase activity]
GO:0030629 [U6 snRNA 3'-end binding]
GO:0032259 [methylation]
GO:0034641 [cellular nitrogen compound metabolic process]
GO:0035613 [RNA stem-loop binding]
GO:0044238 [primary metabolic process]
GO:0046483 [heterocycle metabolic process]
GO:0048024 [regulation of mRNA splicing, via spliceosome]
GO:0052907 [23S rRNA (adenine(1618)-N(6))-methyltransferase activity]
GO:0061157 [mRNA destabilization]
GO:0070475 [rRNA base methylation]
GO:0080009 [mRNA methylation]
GO:0120048 [U6 snRNA (adenine-(43)-N(6))-methyltransferase activity]
GO:0120049 [snRNA (adenine-N6)-methylation]
GO:1901360 [organic cyclic compound metabolic process]
GO:1905869 [negative regulation of 3'-UTR-mediated mRNA stabilization]
Show all
562 aa
63.6 kDa
No 0
METTL16-209
ENSP00000461546
ENST00000576976
I3L4V1
[Direct mapping] RNA N6-adenosine-methyltransferase METTL16
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0006725 [cellular aromatic compound metabolic process]
GO:0008168 [methyltransferase activity]
GO:0016740 [transferase activity]
GO:0034641 [cellular nitrogen compound metabolic process]
GO:0044238 [primary metabolic process]
GO:0046483 [heterocycle metabolic process]
GO:1901360 [organic cyclic compound metabolic process]
Show all
148 aa
17.1 kDa
No 0

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