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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:130.7 nTPM
HPA Brain:77.3 nTPM
GTEx:130.7 nTPM
FANTOM5:99.1 Scaled Tags Per Million
Pig:26.1 nTPM
Mouse:131.8 nTPM
Allen mouse:6.1 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA010134Antibody HPA017068
Glial cells Not detectedLow
Neuronal cells LowMedium





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

77.3
Sample id Sample description nTPM
Caudate nucleus
nTPM: 77.3
2846 Female, age 79, unknown 94.4
2290 Female, age 72, unknown 86.0
1857 Female, age 85, left hemisphere 80.2
2481 Female, age 94, left hemisphere 74.6
1854 Male, age 80, left hemisphere 74.5
1781 Male, age 74, unknown 73.9
2289 Male, age 61, right hemisphere 67.4
2288 Male, age 75, left hemisphere 67.0
Globus pallidus, externus
nTPM: 68.6
2772 Female, age 79, unknown 84.6
1996 Male, age 80, right hemisphere 73.7
2395 Male, age 75, both hemispheres 73.1
2646 Male, age 61, right hemisphere 70.0
2567 Female, age 72, unknown 41.9
Globus pallidus, internus
nTPM: 62.0
2483 Female, age 94, right hemisphere 86.1
2287 Male, age 75, right hemisphere 71.7
1818 Male, age 74, unknown 69.4
2037 Male, age 80, right hemisphere 64.8
2778 Female, age 91, both hemispheres 60.5
2566 Female, age 72, unknown 43.2
2111 Female, age 85, right hemisphere 38.6
Nucleus accumbens
nTPM: 69.6
1856 Female, age 91, right hemisphere 85.4
2286 Male, age 75, left hemisphere 81.1
1783 Male, age 74, unknown 79.7
2824 Male, age 61, right hemisphere 75.3
1806 Female, age 85, left hemisphere 73.8
2698 Female, age 72, unknown 63.5
2391 Female, age 94, left hemisphere 56.8
2732 Male, age 80, right hemisphere 40.8
Nucleus basalis of Meynert
nTPM: 67.5
2569 Male, age 61, both hemispheres 73.7
2484 Female, age 94, left hemisphere 70.7
2393 Male, age 80, right hemisphere 64.1
2821 Male, age 75, both hemispheres 61.5
Nucleus of the diagonal band
nTPM: 55.7
1812 Female, age 91, both hemispheres 64.3
2029 Male, age 61, right hemisphere 63.1
2775 Male, age 80, right hemisphere 57.7
2195 Female, age 85, both hemispheres 52.2
1979 Male, age 74, unknown 41.4
Putamen
nTPM: 71.2
1937 Female, age 91, right hemisphere 86.0
2466 Female, age 79, unknown 81.0
1838 Male, age 80, right hemisphere 75.4
2482 Female, age 94, left hemisphere 71.6
1829 Male, age 74, unknown 67.6
2489 Female, age 72, unknown 59.4
2647 Male, age 75, left hemisphere 57.7
Septal nuclei
nTPM: 51.8
2031 Female, age 72, unknown 65.0
1960 Male, age 74, unknown 60.3
2009 Female, age 91, both hemispheres 51.7
2394 Male, age 61, left hemisphere 49.9
2629 Female, age 94, right hemisphere 49.3
2059 Female, age 85, both hemispheres 48.6
2199 Male, age 80, right hemisphere 37.7
Stria terminalis, bed nucleus
nTPM: 52.0
1974 Female, age 91, both hemispheres 66.7
2201 Male, age 74, unknown 45.3
2486 Female, age 94, both hemispheres 44.0

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

130.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 118.4
Samples: 246

Max nTPM: 310.7
Min nTPM: 60.2
Std nTPM: 28.3
Median nTPM: 113.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 310.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 243.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 204.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 198.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 194.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 189.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 181.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 179.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 178.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 176.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 173.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 173.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 172.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 167.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 166.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 165.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 161.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 161.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 159.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 157.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 153.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 147.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 146.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 146.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 144.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 144.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 144.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 142.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 142.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 141.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 141.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 141.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 140.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 140.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 140.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 139.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 139.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 139.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 138.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 138.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 137.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 137.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 136.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 136.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 136.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 136.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 135.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 135.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 135.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 135.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 135.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 135.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 134.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 134.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 133.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 133.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 133.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 132.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 132.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 132.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 132.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 131.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 131.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 130.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 130.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 130.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 129.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 129.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 129.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 129.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 128.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 128.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 128.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 128.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 128.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 127.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 127.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 127.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 127.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 127.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 126.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 126.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 126.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 126.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 126.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 126.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 125.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 124.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 124.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 124.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 124.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 123.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 123.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 123.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 121.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 120.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 120.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 120.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 119.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 119.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 119.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 119.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 118.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 117.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 117.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 117.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 117.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 117.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 117.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 116.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 116.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 116.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 116.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 116.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 115.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 115.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 114.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 113.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 113.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 113.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 113.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 113.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 113.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 112.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 112.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 112.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 112.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 112.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 111.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 111.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 111.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 111.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 111.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 111.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 110.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 110.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 110.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 110.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 110.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 109.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 109.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 109.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 108.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 108.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 108.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 108.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 108.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 107.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 107.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 107.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 107.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 107.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 107.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 107.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 107.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 106.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 106.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 106.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 106.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 105.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 105.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 105.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 105.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 105.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 105.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 104.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 104.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 104.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 104.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 104.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 103.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 103.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 103.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 102.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 102.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 102.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 102.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 102.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 102.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 102.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 101.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 101.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 101.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 100.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 100.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 100.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 100.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 100.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 100.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 99.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 99.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 99.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 99.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 99.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 98.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 98.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 98.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 98.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 97.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 97.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 97.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 97.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 96.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 95.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 95.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 95.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 95.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 95.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 95.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 95.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 95.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 94.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 93.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 91.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 91.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 90.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 90.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 90.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 90.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 89.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 89.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 89.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 89.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 89.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 88.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 88.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 87.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 87.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 87.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 87.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 87.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 86.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 85.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 84.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 84.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 83.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 81.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 81.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 77.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 75.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 75.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 73.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 73.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 70.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 68.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 60.2
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 118.3
Samples: 246

Max nTPM: 393.7
Min nTPM: 32.6
Std nTPM: 39.6
Median nTPM: 111.4
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 393.7
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 357.6
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 260.8
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 232.5
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 230.5
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 230.0
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 211.4
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 204.3
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 193.3
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 191.3
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 190.4
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 184.4
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 175.2
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 172.0
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 170.5
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 168.5
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 167.1
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 166.8
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 164.3
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 163.9
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 162.6
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 162.1
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 161.9
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 160.5
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 159.4
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 158.3
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 158.3
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 158.0
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 157.9
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 154.4
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 151.7
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 149.2
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 148.2
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 147.0
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 146.1
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 144.7
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 143.6
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 143.5
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 143.4
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 142.8
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 142.4
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 141.3
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 140.4
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 140.3
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 139.6
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 139.1
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 138.8
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 138.4
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 138.4
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 138.1
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 137.9
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 137.5
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 137.2
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 137.2
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 137.1
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 136.9
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 135.8
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 135.7
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 135.2
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 135.2
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 135.0
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 134.8
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 134.4
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 133.1
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 133.0
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 132.6
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 131.3
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 130.4
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 130.3
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 130.1
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 129.8
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 129.3
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 128.1
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 127.5
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 127.3
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 127.3
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 127.0
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 126.4
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 126.3
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 126.3
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 126.1
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 126.0
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 126.0
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 125.1
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 125.1
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 124.9
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 124.0
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 123.9
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 123.9
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 121.3
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 121.2
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 120.9
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 120.9
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 120.4
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 120.1
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 120.1
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 119.7
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 119.7
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 119.3
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 118.9
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 118.7
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 118.7
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 117.8
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 117.4
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 116.6
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 116.5
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 116.2
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 116.1
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 116.0
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 115.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 115.3
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 114.7
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 114.2
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 113.9
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 113.8
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 113.7
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 113.3
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 113.2
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 113.2
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 112.7
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 112.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 111.8
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 111.4
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 111.4
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 110.4
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 109.5
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 109.5
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 109.4
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 109.2
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 108.2
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 108.2
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 108.0
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 107.7
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 107.7
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 107.6
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 107.3
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 107.2
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 107.0
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 106.5
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 106.4
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 106.4
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 106.4
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 106.2
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 106.0
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 105.8
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 105.4
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 105.3
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 105.0
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 104.7
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 104.5
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 103.7
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 103.4
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 103.2
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 103.2
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 103.2
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 102.6
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 102.0
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 101.5
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 101.4
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 101.2
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 101.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 100.9
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 100.3
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 100.1
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 99.7
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 98.7
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 98.5
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 98.4
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 98.4
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 98.3
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 98.2
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 97.7
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 97.6
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 97.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 97.6
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 97.6
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 96.2
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 96.0
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 95.1
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 94.0
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 93.9
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 93.7
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 93.0
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 92.7
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 92.5
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 91.9
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 91.7
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 91.5
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 91.3
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 91.3
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 91.0
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 90.8
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 90.3
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 90.1
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 90.1
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 90.0
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 90.0
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 89.8
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 89.7
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 89.7
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 89.6
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 89.1
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 88.9
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 88.8
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 88.8
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 88.3
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 87.6
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 87.6
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 87.4
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 87.3
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 87.0
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 86.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 86.5
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 86.1
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 85.8
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 85.3
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 85.2
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 84.8
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 83.7
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 83.7
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 83.4
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 83.0
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 83.0
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 82.7
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 82.0
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 81.2
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 81.2
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 80.5
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 79.9
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 79.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 79.4
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 77.3
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 77.2
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 74.8
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 74.4
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 74.2
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 73.8
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 73.5
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 73.2
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 70.5
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 70.4
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 70.0
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 68.8
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 64.9
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 53.9
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 32.6
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Brain - Putamen (basal ganglia)
Average nTPM: 130.7
Samples: 205

Max nTPM: 251.9
Min nTPM: 67.0
Std nTPM: 28.4
Median nTPM: 128.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 251.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 226.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 218.3
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 212.7
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 206.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 200.4
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 195.5
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 189.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 182.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 178.6
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 177.4
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 176.7
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 176.4
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 174.3
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 173.6
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 172.8
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 172.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 171.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 171.0
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 169.9
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 169.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 168.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 165.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 165.1
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 164.9
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 164.7
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 163.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 161.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 161.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 158.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 158.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 156.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 155.7
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 155.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 155.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 153.7
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 153.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 153.3
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 152.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 152.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 151.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 150.3
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 149.7
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 148.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 147.7
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 146.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 146.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 146.2
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 145.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 145.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 144.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 144.6
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 144.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 143.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 143.1
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 142.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 142.2
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 142.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 141.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 141.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 141.5
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 141.4
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 140.9
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 140.7
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 140.3
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 140.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 139.7
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 138.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 138.9
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 138.0
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 136.7
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 136.7
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 136.6
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 136.5
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 136.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 136.4
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 136.0
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 135.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 135.8
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 135.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 134.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 134.1
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 133.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 133.4
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 133.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 133.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 133.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 132.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 132.5
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 132.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 132.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 131.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 131.2
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 131.1
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 131.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 130.7
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 130.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 129.9
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 129.9
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 129.4
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 129.3
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 128.6
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 128.4
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 128.3
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 128.3
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 128.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 128.1
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 127.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 127.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 126.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 125.7
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 125.0
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 124.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 124.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 124.1
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 123.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 123.4
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 123.2
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 122.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 122.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 122.4
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 121.9
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 121.9
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 121.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 120.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 120.9
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 120.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 120.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 118.9
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 118.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 118.2
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 117.5
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 116.0
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 115.8
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 114.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 114.6
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 114.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 114.1
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 113.7
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 113.2
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 113.1
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 113.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 112.8
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 112.4
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 112.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 111.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 111.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 111.7
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 111.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 111.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 110.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 110.5
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 110.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 110.2
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 109.8
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 109.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 109.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 109.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 108.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 108.4
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 107.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 107.3
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 107.1
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 106.7
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 105.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 105.7
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 105.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 104.3
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 104.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 104.0
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 103.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 103.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 103.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 102.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 102.1
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 101.9
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 101.7
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 101.2
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 100.9
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 100.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 100.8
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 100.2
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 100.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 100.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 99.3
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 99.0
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 98.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 98.7
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 95.3
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 95.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 95.0
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 94.8
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 94.2
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 93.4
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 92.8
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 92.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 92.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 91.4
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 90.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 87.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 87.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 86.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 86.0
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 83.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 67.0
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

99.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 73.1
FF:10164-103B2 76 years, female 73.1
Nucleus accumbens
Scaled Tags Per Million: 68.6
FF:10037-101F1 23-56 years, mixed 68.6
Putamen
Scaled Tags Per Million: 99.1
FF:10176-103C5 60 years, female 99.1
Globus pallidus
Scaled Tags Per Million: 55.3
FF:10161-103A8 76 years, female 58.8
FF:10175-103C4 60 years, female 51.7

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

26.1
Pig sample Sample description nTPM
Caudate
nTPM: 21.4
Samples: 4

Max nTPM: 28.1
Min nTPM: 15.3
Sample A Female 15.3
Sample B Female 22.2
Sample C Male 28.1
Sample D Male 19.8
Putamen
nTPM: 26.1
Samples: 4

Max nTPM: 40.2
Min nTPM: 13.9
Sample A Female 13.9
Sample B Female 21.9
Sample C Male 40.2
Sample D Male 28.4
Septum
nTPM: 16.0
Samples: 4

Max nTPM: 18.8
Min nTPM: 12.8
Sample A Female 12.8
Sample B Female 16.1
Sample C Male 18.8
Sample D Male 16.4
Ventral pallidum
nTPM: 20.3
Samples: 4

Max nTPM: 30.8
Min nTPM: 14.0
Sample A Female 14.0
Sample B Female 20.8
Sample C Male 30.8
Sample D Male 15.5

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

131.8
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 118.6
Samples: 4

Max nTPM: 129.3
Min nTPM: 109.9
Sample A Male 121.9
Sample B Male 129.3
Sample C Female 113.3
Sample D Female 109.9
Septum
nTPM: 117.4
Samples: 4

Max nTPM: 123.7
Min nTPM: 111.3
Sample A Male 122.8
Sample B Male 111.8
Sample C Female 111.3
Sample D Female 123.7
Ventral forebrain
nTPM: 131.8
Samples: 4

Max nTPM: 137.7
Min nTPM: 128.1
Sample A Male 128.6
Sample B Male 137.7
Sample C Female 128.1
Sample D Female 132.8

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

6.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 3.6
69262253 Antisense, RP_050301_02_A01, Mouse strain C57BL/6J (56 days, male) 4.9
73769326 Antisense, RP_051121_04_B11, Mouse strain C57BL/6J (56 days, male) 2.4
Pallidum
Expression energy: 6.1
69262253 Antisense, RP_050301_02_A01, Mouse strain C57BL/6J (56 days, male) 6.2
73769326 Antisense, RP_051121_04_B11, Mouse strain C57BL/6J (56 days, male) 6.0

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