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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:116.7 nTPM
HPA Brain:71.5 nTPM
GTEx:116.7 nTPM
FANTOM5:45.1 Scaled Tags Per Million
Pig:53.9 nTPM
Mouse:86.2 nTPM
Allen mouse:2.1 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA021995Antibody HPA022476Antibody CAB003783
Glial cells MediumMediumMedium
Neuronal cells MediumMediumMedium




BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

71.5
Sample id Sample description nTPM
Caudate nucleus
nTPM: 69.1
2481 Female, age 94, left hemisphere 94.0
1857 Female, age 85, left hemisphere 73.5
2288 Male, age 75, left hemisphere 70.3
1854 Male, age 80, left hemisphere 69.6
2290 Female, age 72, unknown 68.2
1781 Male, age 74, unknown 63.7
2846 Female, age 79, unknown 58.2
2289 Male, age 61, right hemisphere 55.7
Globus pallidus, externus
nTPM: 71.5
2772 Female, age 79, unknown 84.7
1996 Male, age 80, right hemisphere 79.9
2646 Male, age 61, right hemisphere 75.9
2395 Male, age 75, both hemispheres 70.8
2567 Female, age 72, unknown 46.3
Globus pallidus, internus
nTPM: 68.5
2483 Female, age 94, right hemisphere 103.6
2287 Male, age 75, right hemisphere 71.6
2778 Female, age 91, both hemispheres 69.1
1818 Male, age 74, unknown 66.6
2037 Male, age 80, right hemisphere 65.0
2111 Female, age 85, right hemisphere 55.4
2566 Female, age 72, unknown 48.2
Nucleus accumbens
nTPM: 70.4
2286 Male, age 75, left hemisphere 81.4
1806 Female, age 85, left hemisphere 75.3
2824 Male, age 61, right hemisphere 73.9
1856 Female, age 91, right hemisphere 73.6
2391 Female, age 94, left hemisphere 72.3
1783 Male, age 74, unknown 70.3
2698 Female, age 72, unknown 58.2
2732 Male, age 80, right hemisphere 58.2
Nucleus basalis of Meynert
nTPM: 61.8
2569 Male, age 61, both hemispheres 82.0
2484 Female, age 94, left hemisphere 58.5
2393 Male, age 80, right hemisphere 56.9
2821 Male, age 75, both hemispheres 49.7
Nucleus of the diagonal band
nTPM: 66.8
2775 Male, age 80, right hemisphere 75.9
1812 Female, age 91, both hemispheres 75.7
2029 Male, age 61, right hemisphere 72.6
2195 Female, age 85, both hemispheres 60.0
1979 Male, age 74, unknown 49.6
Putamen
nTPM: 63.2
2482 Female, age 94, left hemisphere 80.5
1937 Female, age 91, right hemisphere 68.5
2466 Female, age 79, unknown 67.5
1838 Male, age 80, right hemisphere 61.5
1829 Male, age 74, unknown 58.1
2647 Male, age 75, left hemisphere 57.3
2489 Female, age 72, unknown 48.9
Septal nuclei
nTPM: 62.3
1960 Male, age 74, unknown 78.4
2031 Female, age 72, unknown 77.8
2009 Female, age 91, both hemispheres 66.8
2059 Female, age 85, both hemispheres 64.5
2394 Male, age 61, left hemisphere 53.8
2629 Female, age 94, right hemisphere 48.4
2199 Male, age 80, right hemisphere 46.7
Stria terminalis, bed nucleus
nTPM: 59.5
1974 Female, age 91, both hemispheres 72.8
2486 Female, age 94, both hemispheres 57.0
2201 Male, age 74, unknown 48.8

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

116.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 105.0
Samples: 246

Max nTPM: 296.1
Min nTPM: 57.5
Std nTPM: 30.4
Median nTPM: 99.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 296.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 236.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 210.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 205.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 197.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 184.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 173.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 170.4
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 167.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 165.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 163.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 162.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 159.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 159.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 158.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 154.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 152.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 151.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 148.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 148.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 146.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 146.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 144.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 142.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 142.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 140.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 139.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 139.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 138.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 137.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 137.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 135.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 133.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 133.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 132.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 132.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 131.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 130.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 129.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 129.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 128.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 128.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 127.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 127.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 126.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 125.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 124.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 123.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 122.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 122.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 120.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 120.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 120.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 120.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 119.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 119.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 119.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 119.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 118.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 117.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 116.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 116.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 116.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 116.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 115.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 114.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 113.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 113.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 112.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 112.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 112.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 112.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 111.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 111.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 111.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 111.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 111.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 110.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 110.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 110.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 110.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 109.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 109.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 108.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 108.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 108.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 108.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 108.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 108.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 108.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 108.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 108.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 107.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 107.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 107.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 107.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 107.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 106.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 106.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 106.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 106.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 105.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 104.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 104.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 104.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 104.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 104.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 104.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 103.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 103.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 103.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 102.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 102.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 101.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 101.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 101.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 101.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 100.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 100.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 99.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 99.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 99.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 99.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 99.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 99.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 98.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 97.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 97.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 97.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 97.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 96.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 96.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 96.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 96.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 95.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 94.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 94.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 94.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 93.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 93.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 93.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 93.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 93.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 93.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 93.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 93.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 93.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 92.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 92.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 92.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 92.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 92.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 91.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 91.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 91.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 91.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 91.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 90.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 90.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 90.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 90.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 90.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 90.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 90.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 89.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 89.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 89.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 88.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 88.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 88.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 88.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 88.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 87.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 87.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 86.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 86.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 86.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 86.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 86.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 85.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 84.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 84.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 84.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 84.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 84.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 84.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 83.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 83.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 83.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 83.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 83.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 83.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 83.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 83.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 82.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 81.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 81.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 80.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 80.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 80.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 80.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 80.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 80.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 80.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 80.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 79.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 79.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 79.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 78.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 78.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 78.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 78.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 78.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 77.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 77.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 77.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 77.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 76.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 76.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 76.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 76.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 75.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 75.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 75.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 74.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 74.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 74.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 74.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 73.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 73.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 72.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 72.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 71.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 69.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 69.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 68.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 68.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 68.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 68.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 67.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 65.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 65.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 64.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 63.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 57.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 57.5
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 107.1
Samples: 246

Max nTPM: 405.8
Min nTPM: 46.9
Std nTPM: 35.3
Median nTPM: 100.0
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 405.8
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 234.7
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 227.3
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 209.2
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 205.3
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 196.4
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 189.1
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 180.4
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 178.1
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 172.2
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 171.6
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 170.3
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 169.5
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 168.7
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 167.9
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 167.4
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 162.9
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 160.5
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 158.5
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 154.5
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 150.9
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 148.7
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 147.6
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 147.3
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 146.1
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 145.9
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 143.0
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 138.6
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 138.4
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 137.9
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 137.1
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 136.6
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 135.7
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 135.6
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 133.9
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 131.9
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 130.7
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 130.3
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 130.2
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 129.9
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 129.0
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 128.8
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 127.2
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 127.1
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 127.0
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 126.7
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 124.7
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 124.4
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 124.1
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 124.0
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 122.1
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 122.0
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 121.6
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 121.1
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 121.0
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 120.8
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 120.5
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 120.1
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 119.1
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 118.9
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 118.8
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 118.6
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 118.5
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 118.0
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 117.6
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 117.3
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 117.3
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 117.2
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 117.1
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 116.8
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 116.5
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 116.1
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 115.8
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 115.3
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 114.9
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 114.7
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 113.8
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 113.6
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 113.5
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 113.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 113.2
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 112.4
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 112.0
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 110.8
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 110.1
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 109.5
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 109.3
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 108.5
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 108.4
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 108.3
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 108.0
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 108.0
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 107.9
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 107.6
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 106.9
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 106.6
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 106.4
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 106.4
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 106.2
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 105.4
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 105.2
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 105.1
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 105.1
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 105.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 104.4
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 104.3
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 103.8
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 103.7
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 103.6
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 103.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 103.4
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 102.7
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 102.4
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 102.3
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 101.7
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 101.4
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 101.1
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 100.6
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 100.4
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 100.4
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 100.3
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 100.2
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 100.1
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 99.9
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 99.9
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 99.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 99.7
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 99.1
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 98.8
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 98.7
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 98.6
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 97.7
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 97.5
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 97.5
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 97.4
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 97.1
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 97.1
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 96.9
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 96.9
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 96.9
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 96.8
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 96.6
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 96.4
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 96.1
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 95.3
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 94.9
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 94.4
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 94.2
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 93.7
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 93.5
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 93.1
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 92.5
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 92.5
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 91.8
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 91.8
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 91.6
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 91.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 91.5
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 91.5
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 91.4
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 90.8
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 90.7
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 90.6
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 90.5
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 90.1
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 90.0
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 89.9
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 89.6
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 89.4
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 89.4
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 88.3
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 88.3
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 88.1
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 87.8
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 87.8
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 87.3
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 87.3
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 87.3
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 87.3
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 86.5
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 85.8
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 85.6
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 85.6
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 84.7
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 84.3
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 84.2
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 84.2
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 84.1
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 84.1
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 84.0
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 83.7
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 83.5
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 83.2
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 83.0
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 82.7
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 82.4
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 81.5
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 81.4
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 81.2
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 81.1
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 81.0
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 80.6
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 80.5
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 80.4
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 80.2
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 79.9
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 79.7
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 79.6
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 79.4
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 79.4
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 79.3
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 78.9
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 78.8
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 78.7
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 78.7
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 78.6
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 78.5
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 78.2
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 77.8
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 77.8
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 77.5
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 77.5
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 77.3
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 77.0
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 76.9
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 76.6
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 75.3
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 75.2
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 74.4
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 73.3
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 72.2
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 71.9
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 71.8
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 71.5
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 71.3
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 69.5
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 69.4
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 69.3
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 68.9
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 68.0
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 67.8
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 64.7
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 63.8
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 62.6
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 53.1
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 46.9
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Brain - Putamen (basal ganglia)
Average nTPM: 116.7
Samples: 205

Max nTPM: 249.2
Min nTPM: 65.2
Std nTPM: 35.7
Median nTPM: 106.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 249.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 246.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 236.5
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 231.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 229.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 226.3
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 225.0
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 213.9
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 203.4
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 189.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 177.0
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 175.4
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 174.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 173.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 172.7
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 172.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 171.3
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 168.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 167.1
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 166.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 163.4
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 163.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 162.3
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 158.5
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 157.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 153.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 152.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 152.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 152.0
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 150.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 149.1
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 148.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 148.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 147.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 147.4
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 147.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 146.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 145.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 141.2
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 141.2
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 140.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 140.4
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 139.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 138.8
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 138.8
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 138.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 137.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 137.8
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 137.3
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 137.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 136.3
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 135.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 130.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 129.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 129.6
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 129.6
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 128.6
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 128.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 127.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 126.7
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 126.7
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 125.9
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 125.7
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 124.7
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 124.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 123.7
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 123.5
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 122.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 122.1
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 122.1
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 121.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 120.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 120.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 119.9
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 119.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 118.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 118.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 118.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 115.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 115.5
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 115.1
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 114.3
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 113.8
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 113.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 112.9
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 112.5
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 112.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 111.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 111.7
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 111.5
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 110.8
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 110.6
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 110.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 110.4
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 109.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 108.8
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 108.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 107.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 107.6
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 107.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 106.7
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 106.2
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 106.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 105.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 105.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 104.1
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 103.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 103.3
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 103.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 103.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 103.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 102.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 102.3
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 102.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 101.8
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 101.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 100.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 100.6
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 100.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 100.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 100.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 100.1
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 100.1
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 99.9
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 99.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 99.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 99.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 99.3
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 98.9
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 98.6
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 98.5
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 98.4
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 98.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 97.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 97.3
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 96.9
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 96.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 96.7
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 96.7
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 96.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 96.2
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 96.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 95.6
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 95.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 95.3
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 94.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 94.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 94.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 93.8
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 93.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 92.2
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 92.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 92.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 90.9
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 90.8
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 90.8
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 90.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 90.4
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 90.2
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 89.5
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 89.4
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 89.3
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 89.1
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 89.1
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 88.8
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 88.3
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 88.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 87.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 87.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 87.6
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 87.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 87.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 87.4
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 87.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 86.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 86.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 86.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 85.7
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 85.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 85.5
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 85.0
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 84.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 84.2
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 83.7
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 83.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 83.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 83.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 82.6
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 81.3
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 81.2
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 81.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 79.1
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 79.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 78.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 78.0
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 75.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 75.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 75.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 72.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 72.2
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 71.9
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 71.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 69.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 68.9
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 65.2
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

45.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 39.1
FF:10164-103B2 76 years, female 39.1
Nucleus accumbens
Scaled Tags Per Million: 45.1
FF:10037-101F1 23-56 years, mixed 45.1
Putamen
Scaled Tags Per Million: 34.8
FF:10176-103C5 60 years, female 34.8
Globus pallidus
Scaled Tags Per Million: 26.6
FF:10161-103A8 76 years, female 31.4
FF:10175-103C4 60 years, female 21.9

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

53.9
Pig sample Sample description nTPM
Caudate
nTPM: 45.2
Samples: 4

Max nTPM: 52.2
Min nTPM: 37.5
Sample A Female 40.4
Sample B Female 52.2
Sample C Male 50.8
Sample D Male 37.5
Putamen
nTPM: 53.9
Samples: 4

Max nTPM: 64.8
Min nTPM: 41.6
Sample A Female 64.8
Sample B Female 41.6
Sample C Male 61.5
Sample D Male 47.7
Septum
nTPM: 52.2
Samples: 4

Max nTPM: 57.7
Min nTPM: 43.4
Sample A Female 57.7
Sample B Female 51.9
Sample C Male 55.7
Sample D Male 43.4
Ventral pallidum
nTPM: 50.0
Samples: 4

Max nTPM: 59.7
Min nTPM: 39.4
Sample A Female 39.4
Sample B Female 59.7
Sample C Male 56.1
Sample D Male 44.6

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

86.2
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 81.6
Samples: 4

Max nTPM: 83.8
Min nTPM: 79.5
Sample A Male 80.5
Sample B Male 82.5
Sample C Female 79.5
Sample D Female 83.8
Septum
nTPM: 86.2
Samples: 4

Max nTPM: 89.5
Min nTPM: 83.1
Sample A Male 83.1
Sample B Male 89.5
Sample C Female 86.2
Sample D Female 86.1
Ventral forebrain
nTPM: 79.9
Samples: 4

Max nTPM: 82.3
Min nTPM: 77.4
Sample A Male 78.8
Sample B Male 77.4
Sample C Female 82.3
Sample D Female 81.0

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 1.1
69671869 Antisense, RP_050428_02_E06, Mouse strain C57BL/6J (56 days, male) 1.1
Pallidum
Expression energy: 2.1
69671869 Antisense, RP_050428_02_E06, Mouse strain C57BL/6J (56 days, male) 2.1

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