Expression of ECHS1 in liver cancer - The Human Protein Atlas

LIVER HEPATOCELLULAR CARCINOMA (TCGA) - Interactive survival scatter plotⁱ

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisⁱ

ECHS1 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 336.76

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average pTPM

503.7

Number of samples

362

Samples

Sample	Description	pTPM
TCGA-DD-AAVP-01A	48 years, male, asian, stage:Stage I, alive, 2752 days	1742.0
TCGA-K7-A6G5-01A	66 years, male, white, stage:Stage I, alive, 512 days	1508.0
TCGA-DD-A73C-01A	65 years, female, white, stage:Stage IIIA, alive, 701 days	1396.2
TCGA-DD-AAEK-01A	51 years, male, asian, stage:Stage II, alive, 1067 days	1270.3
TCGA-ZP-A9CV-01A	59 years, male, white, stage:'--, dead, 1088 days	1214.1
TCGA-G3-AAV2-01A	50 years, male, white, stage:Stage I, alive, 372 days	1189.9
TCGA-DD-A3A2-01A	76 years, female, white, stage:Stage I, dead, 2131 days	1180.8
TCGA-FV-A2QQ-01A	80 years, male, white, stage:Stage I, alive, 729 days	1168.2
TCGA-DD-A73E-01A	66 years, male, white, stage:Stage I, alive, 44 days	1129.8
TCGA-DD-A3A8-01A	75 years, male, white, stage:Stage II, dead, 11 days	1117.1
TCGA-DD-A1EB-01A	72 years, female, stage:Stage I, alive, 2017 days	1074.9
TCGA-4R-AA8I-01A	66 years, male, white, stage:Stage II, dead, 262 days	1070.2
TCGA-EP-A12J-01A	62 years, male, black or african american, stage:Stage I, alive, 570 days	1067.2
TCGA-DD-AAEB-01A	60 years, male, asian, stage:Stage I, alive, 478 days	1033.2
TCGA-DD-A4NV-01A	61 years, male, white, stage:Stage IIIA, alive, 2398 days	1032.7
TCGA-CC-A7IH-01A	58 years, male, asian, stage:Stage IIIA, alive, 365 days	1002.5
TCGA-ZS-A9CG-01A	55 years, male, white, stage:Stage II, alive, 341 days	974.3
TCGA-G3-A25V-01A	68 years, male, white, stage:Stage I, alive, 860 days	960.0
TCGA-HP-A5N0-01A	90 years, female, stage:'--, dead, 752 days	947.4
TCGA-EP-A26S-01A	70 years, male, white, stage:Stage I, alive, 608 days	941.5
TCGA-DD-A4NP-01A	32 years, male, white, stage:Stage I, alive, 3308 days	913.6
TCGA-DD-AADG-01A	70 years, male, asian, stage:Stage IIIA, alive, 1145 days	907.2
TCGA-G3-AAV0-01A	58 years, male, asian, stage:Stage I, alive, 476 days	906.7
TCGA-G3-A7M8-01A	31 years, male, asian, stage:Stage I, alive, 430 days	887.8
TCGA-DD-AADI-01A	43 years, female, asian, stage:Stage I, alive, 1085 days	879.0
TCGA-DD-AAD0-01A	73 years, female, asian, stage:Stage I, alive, 137 days	876.0
TCGA-DD-AACN-01A	32 years, male, asian, stage:Stage I, alive, 1302 days	852.5
TCGA-DD-AAW0-01A	54 years, male, asian, stage:Stage I, alive, 2015 days	850.8
TCGA-ES-A2HS-01A	80 years, male, white, stage:Stage I, dead, 688 days	846.6
TCGA-DD-A4NK-01A	80 years, female, white, stage:Stage IIIA, dead, 1210 days	841.6
TCGA-DD-AAE4-01A	49 years, female, asian, stage:Stage I, alive, 608 days	837.5
TCGA-DD-AAE6-01A	59 years, female, asian, stage:Stage I, alive, 141 days	819.7
TCGA-2Y-A9HA-01A	70 years, male, white, stage:Stage II, dead, 36 days	817.8
TCGA-DD-A11D-01A	57 years, female, white, stage:Stage I, dead, 1560 days	814.6
TCGA-MR-A520-01A	58 years, male, white, stage:Stage I, alive, 229 days	814.3
TCGA-DD-AAW1-01A	55 years, male, asian, stage:Stage IIIA, alive, 1989 days	805.6
TCGA-DD-AADD-01A	51 years, male, asian, stage:Stage I, alive, 1231 days	803.9
TCGA-UB-AA0V-01A	69 years, female, white, stage:Stage I, alive, 314 days	803.8
TCGA-NI-A4U2-01A	71 years, male, white, stage:Stage IIIA, dead, 1791 days	802.3
TCGA-G3-AAV3-01A	58 years, female, white, stage:Stage II, alive, 412 days	799.6
TCGA-K7-A5RF-01A	64 years, male, white, stage:Stage I, alive, 631 days	797.3
TCGA-DD-A11B-01A	73 years, male, white, stage:Stage I, dead, 14 days	787.2
TCGA-DD-A3A1-01A	65 years, male, stage:Stage IIIA, dead, 233 days	785.9
TCGA-DD-AAEI-01A	72 years, male, asian, stage:Stage I, alive, 1531 days	784.3
TCGA-DD-A3A5-01A	66 years, female, white, stage:Stage III, dead, 3125 days	783.5
TCGA-BC-A10X-01A	52 years, female, white, stage:Stage IIIA, dead, 770 days	780.3
TCGA-G3-A5SM-01A	58 years, male, white, stage:Stage II, alive, 520 days	767.9
TCGA-DD-AAE9-01A	69 years, male, asian, stage:Stage I, alive, 722 days	766.8
TCGA-NI-A8LF-01A	74 years, male, white, stage:Stage I, alive, 799 days	765.5
TCGA-DD-AADK-01A	68 years, female, asian, stage:Stage II, alive, 1049 days	764.3
TCGA-CC-A7IK-01A	59 years, male, asian, stage:Stage IIIA, dead, 262 days	761.8
TCGA-G3-A25S-01A	64 years, male, white, stage:Stage I, dead, 416 days	761.3
TCGA-2Y-A9GZ-01A	82 years, female, white, stage:Stage II, dead, 848 days	760.4
TCGA-DD-AAVQ-01A	38 years, male, asian, stage:Stage I, alive, 2728 days	757.0
TCGA-ZS-A9CE-01A	79 years, female, white, stage:Stage II, alive, 1241 days	756.0
TCGA-T1-A6J8-01A	68 years, male, white, stage:'--, alive, 23 days	754.8
TCGA-ED-A7PZ-01A	61 years, male, asian, stage:Stage II, alive, 6 days	752.1
TCGA-ED-A4XI-01A	58 years, male, asian, stage:Stage II, alive, 819 days	751.2
TCGA-G3-A6UC-01A	65 years, male, white, stage:Stage IIIB, alive, 671 days	744.1
TCGA-G3-A7M7-01A	65 years, male, white, stage:Stage I, alive, 361 days	743.1
TCGA-DD-A3A4-01A	37 years, male, white, stage:Stage IIIA, dead, 612 days	737.5
TCGA-FV-A495-01A	51 years, female, white, stage:Stage II, alive, 1 days	734.8
TCGA-RC-A7SK-01A	59 years, male, asian, stage:Stage I, alive, 472 days	734.0
TCGA-DD-AACK-01A	70 years, male, asian, stage:Stage I, alive, 9 days	727.1
TCGA-DD-AACT-01A	69 years, female, asian, stage:Stage I, alive, 1562 days	722.3
TCGA-DD-A39Z-01A	43 years, female, stage:Stage II, dead, 601 days	710.1
TCGA-CC-A5UD-01A	45 years, male, asian, stage:Stage IIIA, dead, 304 days	709.7
TCGA-WX-AA46-01A	61 years, male, white, stage:Stage II, alive, 756 days	701.6
TCGA-UB-A7MF-01A	56 years, male, white, stage:Stage IIIA, dead, 214 days	701.5
TCGA-ZP-A9D4-01A	64 years, female, white, stage:'--, alive, 395 days	688.9
TCGA-DD-AACE-01A	62 years, male, asian, stage:Stage I, alive, 2184 days	688.4
TCGA-DD-AADV-01A	50 years, male, asian, stage:Stage I, alive, 574 days	687.1
TCGA-GJ-A6C0-01A	75 years, female, white, stage:Stage II, dead, 31 days	684.6
TCGA-DD-A4NB-01A	25 years, male, white, stage:Stage I, alive, 989 days	684.5
TCGA-ZP-A9CY-01A	66 years, female, white, stage:'--, alive, 782 days	679.0
TCGA-DD-AACH-01A	69 years, male, asian, stage:Stage II, dead, 195 days	676.9
TCGA-FV-A4ZP-01A	78 years, male, white, stage:Stage IIIA, dead, 2486 days	674.7
TCGA-BD-A2L6-01A	69 years, male, white, stage:'--, alive, 1363 days	670.8
TCGA-2Y-A9GU-01A	55 years, female, white, stage:Stage I, alive, 1939 days	669.0
TCGA-DD-AAEE-01A	55 years, male, asian, stage:Stage I, alive, 810 days	667.2
TCGA-G3-A3CK-01A	61 years, male, asian, stage:Stage I, alive, 585 days	658.5
TCGA-G3-A3CH-01A	53 years, male, asian, stage:Stage IIIA, alive, 780 days	655.0
TCGA-DD-A118-01A	77 years, female, white, stage:Stage II, alive, 3437 days	649.2
TCGA-EP-A3JL-01A	76 years, male, white, stage:Stage I, alive, 303 days	646.3
TCGA-DD-A39X-01A	78 years, female, white, stage:Stage I, dead, 1694 days	644.4
TCGA-DD-AAD3-01A	43 years, male, asian, stage:Stage I, alive, 1295 days	643.4
TCGA-DD-AADJ-01A	70 years, female, asian, stage:Stage I, alive, 1066 days	642.7
TCGA-DD-A1ED-01A	68 years, male, white, stage:Stage I, alive, 2301 days	641.5
TCGA-DD-A3A9-01A	64 years, female, white, stage:Stage IVB, dead, 931 days	638.5
TCGA-CC-A8HS-01A	18 years, male, asian, stage:Stage IIIC, dead, 300 days	636.4
TCGA-DD-AADW-01A	48 years, male, asian, stage:Stage I, alive, 587 days	635.7
TCGA-G3-AAV7-01A	38 years, male, asian, stage:Stage II, alive, 361 days	635.0
TCGA-HP-A5MZ-01A	78 years, male, stage:Stage I, dead, 91 days	633.4
TCGA-KR-A7K7-01A	61 years, female, white, stage:Stage II, alive, 951 days	628.5
TCGA-BC-A69I-01A	69 years, male, white, stage:Stage I, alive, 387 days	626.3
TCGA-G3-A5SI-01A	44 years, male, asian, stage:Stage II, dead, 768 days	624.8
TCGA-DD-A4NF-01A	72 years, male, white, stage:Stage I, alive, 942 days	623.9
TCGA-KR-A7K0-01A	65 years, male, white, stage:Stage I, dead, 65 days	620.0
TCGA-G3-A7M5-01A	76 years, male, asian, stage:Stage I, alive, 447 days	618.3
TCGA-DD-AAVU-01A	46 years, male, asian, stage:Stage II, alive, 2202 days	614.8
TCGA-G3-AAV5-01A	67 years, male, white, stage:Stage II, alive, 354 days	611.6
TCGA-DD-AACF-01A	68 years, male, asian, stage:Stage I, dead, 365 days	609.8
TCGA-XR-A8TE-01A	16 years, male, white, stage:Stage IIIA, alive, 925 days	609.0
TCGA-XR-A8TF-01A	74 years, male, white, stage:Stage I, dead, 693 days	608.4
TCGA-MI-A75C-01A	64 years, male, white, stage:Stage I, alive, 291 days	605.8
TCGA-DD-AADU-01A	60 years, male, asian, stage:Stage II, alive, 554 days	602.3
TCGA-ZS-A9CD-01A	73 years, male, white, stage:Stage II, dead, 1386 days	599.3
TCGA-DD-AAW2-01A	69 years, male, asian, stage:Stage I, alive, 1855 days	599.0
TCGA-CC-A8HU-01A	39 years, female, asian, stage:Stage IIIA, dead, 344 days	597.6
TCGA-DD-A4NL-01A	46 years, male, white, stage:Stage I, alive, 1711 days	597.4
TCGA-2Y-A9GT-01A	51 years, male, white, stage:Stage I, dead, 1624 days	597.3
TCGA-G3-A25Z-01A	58 years, male, asian, stage:Stage I, alive, 655 days	591.1
TCGA-UB-A7ME-01A	51 years, male, asian, stage:Stage I, alive, 486 days	590.1
TCGA-DD-A116-01A	68 years, male, asian, stage:Stage IIIA, dead, 1622 days	588.0
TCGA-MI-A75E-01A	61 years, male, white, stage:Stage IIIC, alive, 507 days	587.4
TCGA-DD-A1EH-01A	23 years, male, white, stage:Stage III, alive, 1495 days	587.1
TCGA-DD-AACA-01A	65 years, male, asian, stage:Stage I, alive, 2301 days	583.0
TCGA-FV-A3I1-01A	81 years, female, white, stage:Stage II, dead, 247 days	581.4
TCGA-LG-A9QC-01A	48 years, male, white, stage:Stage I, alive, 425 days	577.6
TCGA-ED-A66X-01A	35 years, male, asian, stage:Stage IIIA, alive, 406 days	577.1
TCGA-2Y-A9H5-01A	59 years, female, white, stage:Stage I, dead, 555 days	575.7
TCGA-MI-A75I-01A	61 years, male, black or african american, stage:'--, alive, 630 days	571.6
TCGA-DD-AAVV-01A	56 years, male, asian, stage:Stage II, alive, 2455 days	571.3
TCGA-3K-AAZ8-01A	65 years, male, black or african american, stage:Stage IIIB, alive, 396 days	570.6
TCGA-BC-A10S-01A	81 years, male, white, stage:'--, dead, 1423 days	570.5
TCGA-BC-A110-01A	51 years, female, black or african american, stage:'--, dead, 2116 days	570.1
TCGA-G3-A3CJ-01A	52 years, male, american indian or alaska native, stage:Stage II, alive, 594 days	568.6
TCGA-UB-A7MB-01A	24 years, male, white, stage:Stage II, alive, 601 days	567.5
TCGA-FV-A2QR-01A	75 years, male, white, stage:Stage I, dead, 581 days	566.0
TCGA-DD-AAE7-01A	72 years, male, asian, stage:Stage I, alive, 644 days	559.4
TCGA-DD-AAVR-01A	44 years, male, asian, stage:Stage I, alive, 2513 days	555.9
TCGA-DD-A39W-01A	29 years, female, white, stage:Stage III, dead, 827 days	555.7
TCGA-DD-A73B-01A	72 years, female, white, stage:Stage I, dead, 283 days	548.2
TCGA-CC-A7IL-01A	61 years, male, asian, stage:Stage IIIA, dead, 278 days	547.8
TCGA-ES-A2HT-01A	54 years, male, black or african american, stage:Stage I, dead, 438 days	547.1
TCGA-CC-5264-01A	71 years, male, asian, stage:Stage IIIA, dead, 102 days	545.7
TCGA-2Y-A9GV-01A	54 years, female, white, stage:Stage I, dead, 2532 days	544.7
TCGA-DD-A1EJ-01A	71 years, female, white, stage:Stage IIIC, dead, 1005 days	540.6
TCGA-DD-AADC-01A	53 years, male, asian, stage:Stage I, dead, 425 days	540.0
TCGA-ED-A627-01A	74 years, male, white, stage:Stage I, alive, 423 days	539.4
TCGA-EP-A3RK-01A	73 years, male, white, stage:Stage IIIA, alive, 363 days	535.4
TCGA-DD-A73A-01A	71 years, male, white, stage:Stage I, alive, 728 days	532.9
TCGA-DD-A1EA-01A	68 years, male, asian, stage:Stage II, alive, 2415 days	532.8
TCGA-G3-A5SL-01A	70 years, male, white, stage:Stage II, alive, 621 days	528.1
TCGA-DD-AACS-01A	39 years, male, asian, stage:Stage I, alive, 1804 days	527.8
TCGA-5C-AAPD-01A	61 years, male, asian, stage:Stage II, alive, 20 days	527.3
TCGA-CC-A3MC-01A	54 years, male, asian, stage:Stage IIIA, alive, 363 days	526.2
TCGA-DD-AAD8-01A	73 years, female, asian, stage:Stage I, alive, 1219 days	524.0
TCGA-DD-AAE3-01A	50 years, male, asian, stage:Stage I, alive, 566 days	521.9
TCGA-BD-A3ER-01A	62 years, male, white, stage:Stage II, alive, 1115 days	518.4
TCGA-LG-A9QD-01A	68 years, male, white, stage:Stage IIIA, alive, 366 days	517.0
TCGA-MI-A75H-01A	77 years, male, white, stage:'--, alive, 747 days	516.2
TCGA-2Y-A9H1-01A	58 years, male, white, stage:Stage I, dead, 1229 days	512.1
TCGA-XR-A8TC-01A	43 years, female, white, stage:Stage I, alive, 1339 days	509.3
TCGA-WQ-AB4B-01A	62 years, male, white, stage:Stage II, alive, 395 days	507.6
TCGA-DD-AAVY-01A	56 years, male, asian, stage:Stage IIIA, alive, 1970 days	506.6
TCGA-BC-A10U-01A	69 years, male, white, stage:'--, dead, 837 days	506.1
TCGA-G3-AAUZ-01A	48 years, male, stage:Stage I, alive, 480 days	505.7
TCGA-DD-AAVW-01A	35 years, male, asian, stage:Stage I, alive, 2317 days	505.4
TCGA-2Y-A9H8-01A	85 years, female, white, stage:'--, dead, 633 days	501.7
TCGA-DD-AAEH-01A	73 years, male, asian, stage:Stage I, alive, 784 days	501.5
TCGA-ZP-A9D1-01A	56 years, female, white, stage:'--, alive, 21 days	499.7
TCGA-ZP-A9D0-01A	67 years, female, black or african american, stage:'--, alive, 1091 days	499.2
TCGA-5R-AAAM-01A	65 years, female, white, stage:Stage II, dead, 46 days	497.3
TCGA-5R-AA1D-01A	17 years, female, white, stage:Stage IIIA, alive, 449 days	496.1
TCGA-2Y-A9GS-01A	58 years, male, white, stage:'--, dead, 724 days	495.4
TCGA-DD-AACY-01A	61 years, male, asian, stage:Stage I, alive, 1450 days	493.4
TCGA-MI-A75G-01A	63 years, male, white, stage:Stage II, alive, 698 days	486.7
TCGA-DD-AACG-01A	52 years, male, asian, stage:Stage II, dead, 469 days	483.3
TCGA-2Y-A9H9-01A	70 years, male, white, stage:Stage I, alive, 697 days	481.0
TCGA-DD-A1EG-01A	76 years, male, white, stage:Stage I, dead, 1372 days	479.8
TCGA-DD-AAE2-01A	51 years, male, asian, stage:Stage I, alive, 638 days	476.9
TCGA-DD-AACU-01A	59 years, male, asian, stage:Stage I, alive, 1567 days	473.7
TCGA-DD-AAC9-01A	51 years, male, asian, stage:Stage I, alive, 347 days	473.5
TCGA-G3-AAV6-01A	53 years, female, white, stage:Stage IIIA, dead, 65 days	473.1
TCGA-DD-AAW3-01A	69 years, male, asian, stage:Stage I, alive, 1633 days	472.1
TCGA-G3-A25Y-01A	52 years, female, asian, stage:Stage I, dead, 452 days	471.3
TCGA-2Y-A9HB-01A	66 years, male, stage:Stage I, alive, 260 days	468.9
TCGA-DD-AADF-01A	64 years, female, asian, stage:Stage I, dead, 115 days	468.8
TCGA-DD-A73G-01A	73 years, female, white, stage:Stage I, alive, 3478 days	467.8
TCGA-LG-A6GG-01A	79 years, female, white, stage:Stage II, alive, 387 days	467.7
TCGA-DD-AAEG-01A	59 years, female, asian, stage:Stage I, alive, 719 days	465.3
TCGA-DD-AADS-01A	63 years, male, asian, stage:Stage I, alive, 474 days	463.6
TCGA-2Y-A9H3-01A	45 years, male, white, stage:Stage II, alive, 1516 days	463.0
TCGA-BC-A10Z-01A	62 years, female, white, stage:Stage I, dead, 34 days	462.7
TCGA-CC-A3MB-01A	36 years, male, asian, stage:Stage IIIA, dead, 315 days	461.8
TCGA-QA-A7B7-01A	48 years, male, black or african american, stage:Stage II, alive, 94 days	461.7
TCGA-G3-A3CI-01A	71 years, male, white, stage:Stage I, alive, 180 days	457.1
TCGA-CC-A7IG-01A	47 years, male, asian, stage:Stage II, dead, 299 days	451.6
TCGA-DD-A1EK-01A	64 years, female, white, stage:Stage IVB, dead, 558 days	451.5
TCGA-DD-AAD2-01A	66 years, male, asian, stage:Stage I, alive, 658 days	448.8
TCGA-GJ-A9DB-01A	68 years, male, white, stage:Stage I, dead, 67 days	448.6
TCGA-DD-AAEA-01A	65 years, male, asian, stage:Stage I, alive, 575 days	445.1
TCGA-EP-A2KC-01A	62 years, male, black or african american, stage:Stage I, dead, 19 days	442.7
TCGA-DD-AAVS-01A	56 years, male, asian, stage:Stage I, alive, 1823 days	442.6
TCGA-G3-A3CG-01A	80 years, male, white, stage:Stage I, alive, 673 days	440.5
TCGA-5R-AA1C-01A	57 years, male, white, stage:Stage II, alive, 520 days	439.7
TCGA-BC-A3KF-01A	66 years, female, white, stage:Stage I, alive, 8 days	438.4
TCGA-ED-A7PY-01A	20 years, female, asian, stage:Stage II, alive, 390 days	438.3
TCGA-RC-A6M5-01A	20 years, female, white, stage:Stage IVA, alive, 15 days	438.1
TCGA-DD-A1EI-01A	46 years, male, asian, stage:Stage I, alive, 183 days	435.3
TCGA-DD-A3A7-01A	67 years, male, stage:Stage IIIB, dead, 419 days	434.6
TCGA-DD-A4NI-01A	67 years, male, white, stage:Stage II, alive, 816 days	434.2
TCGA-DD-A113-01A	55 years, female, white, stage:Stage II, alive, 2425 days	433.1
TCGA-BC-A10R-01A	66 years, female, white, stage:'--, dead, 308 days	431.2
TCGA-G3-A5SK-01A	58 years, male, white, stage:Stage I, alive, 744 days	429.5
TCGA-2Y-A9H6-01A	68 years, female, white, stage:Stage I, alive, 357 days	424.7
TCGA-CC-5263-01A	35 years, male, asian, stage:Stage IIIA, dead, 129 days	422.0
TCGA-ED-A7XO-01A	29 years, male, asian, stage:Stage IIIA, alive, 427 days	421.3
TCGA-DD-AAVZ-01A	38 years, male, asian, stage:Stage I, alive, 1900 days	418.1
TCGA-DD-A73F-01A	77 years, female, white, stage:Stage I, alive, 1085 days	415.4
TCGA-CC-A7IF-01A	59 years, male, asian, stage:Stage IIIA, dead, 649 days	411.6
TCGA-DD-A4ND-01A	56 years, female, white, stage:Stage I, alive, 2746 days	410.6
TCGA-DD-A4NJ-01A	54 years, female, white, stage:Stage II, alive, 928 days	406.9
TCGA-GJ-A3OU-01A	59 years, male, white, stage:Stage I, alive, 879 days	403.5
TCGA-DD-AADB-01A	51 years, male, asian, stage:Stage I, alive, 1242 days	402.9
TCGA-G3-A25U-01A	63 years, female, asian, stage:Stage I, alive, 1636 days	396.3
TCGA-FV-A4ZQ-01A	52 years, male, white, stage:Stage I, alive, 12 days	393.5
TCGA-UB-A7MD-01A	67 years, male, black or african american, stage:Stage I, dead, 52 days	392.9
TCGA-DD-A4NG-01A	77 years, male, white, stage:Stage IIIA, dead, 802 days	392.7
TCGA-KR-A7K8-01A	57 years, male, stage:Stage I, alive, 906 days	391.9
TCGA-DD-AACO-01A	40 years, male, asian, stage:Stage I, alive, 1876 days	391.5
TCGA-RC-A7SB-01A	53 years, male, asian, stage:Stage II, alive, 588 days	389.9
TCGA-BC-A216-01A	62 years, female, white, stage:Stage IIIA, alive, 1351 days	387.3
TCGA-EP-A2KB-01A	46 years, female, white, stage:Stage I, dead, 596 days	383.6
TCGA-BC-A3KG-01A	68 years, female, white, stage:Stage II, alive, 680 days	381.2
TCGA-BC-A8YO-01A	66 years, female, white, stage:Stage IIIC, alive, 562 days	380.6
TCGA-DD-A4NS-01A	61 years, female, white, stage:Stage I, dead, 2456 days	379.3
TCGA-DD-AADP-01A	45 years, male, asian, stage:Stage I, alive, 458 days	379.3
TCGA-BC-A217-01A	75 years, female, white, stage:Stage II, dead, 1397 days	377.3
TCGA-DD-A1EL-01A	23 years, male, black or african american, stage:Stage II, dead, 415 days	375.4
TCGA-UB-A7MC-01A	59 years, male, white, stage:Stage IIIA, alive, 500 days	375.1
TCGA-O8-A75V-01A	54 years, male, stage:Stage I, alive, 538 days	374.9
TCGA-DD-AADQ-01A	59 years, male, asian, stage:Stage II, alive, 436 days	374.3
TCGA-G3-AAV4-01A	83 years, female, white, stage:Stage I, dead, 27 days	373.5
TCGA-WJ-A86L-01A	68 years, female, white, stage:Stage I, alive, 345 days	368.8
TCGA-DD-AACI-01A	69 years, male, asian, stage:Stage II, alive, 1618 days	368.1
TCGA-DD-AACL-01A	66 years, female, asian, stage:Stage I, dead, 107 days	366.3
TCGA-BC-A69H-01A	64 years, male, white, stage:Stage II, alive, 444 days	365.7
TCGA-DD-A4NN-01A	56 years, female, white, stage:Stage I, dead, 899 days	363.9
TCGA-2Y-A9H7-01A	81 years, female, white, stage:Stage I, alive, 1168 days	363.7
TCGA-DD-AADA-01A	66 years, female, asian, stage:Stage I, alive, 1233 days	363.5
TCGA-DD-AADL-01A	58 years, male, asian, stage:Stage I, alive, 636 days	363.4
TCGA-CC-A9FS-01A	55 years, male, asian, stage:Stage II, alive, 211 days	361.4
TCGA-DD-AACP-01A	64 years, male, asian, stage:Stage I, alive, 415 days	358.8
TCGA-FV-A3R3-01A	38 years, female, white, stage:Stage I, dead, 366 days	357.8
TCGA-DD-AACV-01A	53 years, male, asian, stage:Stage I, alive, 1531 days	357.2
TCGA-DD-A39V-01A	77 years, male, white, stage:Stage II, dead, 643 days	356.8
TCGA-DD-AAC8-01A	72 years, male, asian, stage:Stage I, dead, 16 days	356.7
TCGA-RC-A7SH-01A	42 years, male, asian, stage:Stage II, alive, 468 days	356.5
TCGA-CC-A5UE-01A	48 years, male, asian, stage:Stage IIIB, dead, 272 days	356.1
TCGA-DD-AACQ-01A	50 years, male, asian, stage:Stage II, dead, 432 days	353.8
TCGA-DD-AAE1-01A	52 years, male, asian, stage:Stage I, alive, 552 days	352.5
TCGA-2Y-A9GW-01A	64 years, male, white, stage:Stage I, dead, 1271 days	352.3
TCGA-2Y-A9H0-01A	49 years, male, white, stage:Stage IIIA, alive, 3675 days	351.5
TCGA-FV-A23B-01A	70 years, female, white, stage:Stage II, dead, 1852 days	350.1
TCGA-DD-AADR-01A	58 years, male, asian, stage:Stage I, alive, 2028 days	346.9
TCGA-DD-AACC-01A	61 years, male, asian, stage:Stage I, dead, 1685 days	345.2
TCGA-ZP-A9D2-01A	51 years, male, white, stage:'--, dead, 765 days	345.1
TCGA-DD-AACB-01A	74 years, female, asian, stage:Stage I, alive, 2324 days	345.0
TCGA-DD-AACD-01A	48 years, male, asian, stage:Stage I, dead, 381 days	343.6
TCGA-BW-A5NO-01A	50 years, male, black or african american, stage:Stage IIIA, alive, 20 days	343.4
TCGA-2Y-A9GX-01A	68 years, male, white, stage:Stage I, alive, 2442 days	341.3
TCGA-ZP-A9CZ-01A	72 years, male, asian, stage:'--, alive, 706 days	340.4
TCGA-5C-A9VH-01A	70 years, male, white, stage:Stage I, alive, 322 days	336.8
TCGA-DD-A4NQ-01A	60 years, male, white, stage:Stage II, dead, 373 days	335.6
TCGA-G3-AAV1-01A	51 years, male, asian, stage:Stage IIIC, dead, 359 days	330.2
TCGA-DD-AADY-01A	55 years, female, asian, stage:Stage I, alive, 555 days	326.5
TCGA-WX-AA44-01A	64 years, female, white, stage:Stage I, alive, 615 days	326.2
TCGA-BC-A5W4-01A	69 years, male, white, stage:Stage IIIA, dead, 547 days	324.2
TCGA-DD-A1EF-01A	57 years, female, white, stage:Stage I, dead, 394 days	320.5
TCGA-UB-AA0U-01A	60 years, male, white, stage:Stage II, alive, 327 days	320.3
TCGA-DD-A39Y-01A	67 years, male, asian, stage:Stage I, dead, 171 days	317.6
TCGA-XR-A8TD-01A	49 years, female, white, stage:Stage IIIB, alive, 1030 days	315.0
TCGA-DD-AADM-01A	58 years, male, asian, stage:Stage II, dead, 12 days	314.5
TCGA-G3-A7M9-01A	70 years, male, white, stage:Stage IIIB, dead, 56 days	313.6
TCGA-PD-A5DF-01A	58 years, female, white, stage:Stage IIIB, dead, 639 days	313.2
TCGA-DD-A1EE-01A	73 years, male, white, stage:Stage IIIA, dead, 349 days	312.7
TCGA-DD-AAVX-01A	38 years, male, asian, stage:Stage II, alive, 1718 days	311.7
TCGA-DD-AACW-01A	43 years, male, asian, stage:Stage I, alive, 1424 days	308.6
TCGA-2Y-A9GY-01A	64 years, female, white, stage:Stage II, dead, 757 days	304.3
TCGA-BC-A10T-01A	76 years, male, white, stage:'--, dead, 837 days	301.5
TCGA-G3-A25T-01A	45 years, female, white, stage:Stage IIIA, alive, 1553 days	300.4
TCGA-WQ-A9G7-01A	71 years, female, white, stage:'--, alive, 30 days	300.1
TCGA-DD-A3A3-01A	45 years, male, asian, stage:Stage I, dead, 535 days	294.5
TCGA-RG-A7D4-01A	69 years, male, black or african american, stage:Stage II, alive, 1098 days	294.5
TCGA-DD-AACJ-01A	75 years, male, asian, stage:Stage II, alive, 2102 days	290.3
TCGA-5C-A9VG-01A	58 years, male, white, stage:Stage II, alive, 328 days	289.5
TCGA-CC-5262-01A	67 years, male, asian, stage:Stage IIIC, dead, 103 days	289.3
TCGA-DD-A115-01A	53 years, male, white, stage:Stage IIIA, dead, 2542 days	289.0
TCGA-CC-A123-01A	24 years, female, asian, stage:Stage IIIA, alive, 219 days	288.4
TCGA-BD-A3EP-01A	75 years, female, black or african american, stage:Stage I, alive, 409 days	287.4
TCGA-CC-A7IJ-01A	56 years, male, asian, stage:Stage II, alive, 382 days	286.8
TCGA-EP-A2KA-01A	52 years, female, white, stage:Stage IIIA, dead, 627 days	285.3
TCGA-2Y-A9H4-01A	68 years, male, black or african american, stage:Stage I, alive, 1452 days	284.9
TCGA-DD-AADO-01A	55 years, male, asian, stage:Stage I, alive, 453 days	284.2
TCGA-DD-AAD1-01A	51 years, female, asian, stage:Stage I, alive, 564 days	283.5
TCGA-CC-A8HV-01A	51 years, female, asian, stage:Stage II, dead, 279 days	282.5
TCGA-DD-AACX-01A	66 years, male, asian, stage:Stage II, alive, 170 days	281.5
TCGA-ED-A8O5-01A	59 years, female, asian, stage:Stage IIIA, alive, 406 days	281.5
TCGA-ED-A7XP-01A	53 years, female, asian, stage:Stage II, alive, 400 days	278.4
TCGA-K7-A5RG-01A	66 years, male, black or african american, stage:Stage I, alive, 519 days	278.4
TCGA-DD-A4NR-01A	85 years, female, white, stage:Stage I, dead, 9 days	277.7
TCGA-DD-A119-01A	40 years, male, asian, stage:Stage IV, dead, 223 days	275.5
TCGA-DD-A11C-01A	69 years, male, white, stage:Stage I, alive, 662 days	274.6
TCGA-RC-A7SF-01A	66 years, male, asian, stage:Stage I, alive, 579 days	272.2
TCGA-KR-A7K2-01A	64 years, male, white, stage:Stage I, alive, 829 days	270.1
TCGA-CC-A9FW-01A	68 years, male, asian, stage:Stage IIIA, alive, 248 days	260.0
TCGA-DD-A4NH-01A	65 years, female, white, stage:Stage IIIB, alive, 917 days	260.0
TCGA-ED-A459-01A	47 years, male, asian, stage:Stage II, alive, 910 days	259.7
TCGA-BC-A10Y-01A	76 years, male, white, stage:'--, dead, 711 days	258.6
TCGA-CC-A5UC-01A	63 years, male, asian, stage:Stage IIIA, dead, 347 days	257.1
TCGA-ZS-A9CF-01A	64 years, male, white, stage:Stage II, alive, 2412 days	256.0
TCGA-XR-A8TG-01A	58 years, male, white, stage:Stage I, alive, 898 days	256.0
TCGA-FV-A496-01A	84 years, female, white, stage:Stage I, alive, 10 days	243.0
TCGA-RC-A6M4-01A	74 years, female, white, stage:Stage IIIA, alive, 22 days	242.3
TCGA-ED-A7PX-01A	48 years, female, asian, stage:Stage II, alive, 6 days	241.4
TCGA-DD-AAD6-01A	66 years, male, asian, stage:Stage IIIA, alive, 672 days	241.4
TCGA-DD-AA3A-01A	81 years, female, white, stage:Stage I, dead, 410 days	240.7
TCGA-G3-A7M6-01A	60 years, female, white, stage:Stage I, alive, 632 days	237.4
TCGA-WX-AA47-01A	33 years, female, white, stage:Stage IIIA, dead, 556 days	236.9
TCGA-CC-A8HT-01A	74 years, male, asian, stage:Stage IIIA, dead, 140 days	235.1
TCGA-DD-A73D-01A	68 years, female, white, stage:Stage II, alive, 693 days	233.5
TCGA-ED-A8O6-01A	50 years, female, asian, stage:Stage IIIA, dead, 56 days	226.6
TCGA-RC-A7S9-01A	47 years, female, asian, stage:Stage I, alive, 640 days	223.9
TCGA-UB-A7MA-01A	62 years, female, white, stage:Stage II, alive, 848 days	223.5
TCGA-2Y-A9H2-01A	64 years, female, white, stage:Stage I, alive, 1731 days	221.2
TCGA-RC-A6M6-01A	75 years, male, white, stage:Stage II, alive, 9 days	219.8
TCGA-ED-A5KG-01A	60 years, female, asian, stage:Stage II, alive, 854 days	218.4
TCGA-CC-5261-01A	44 years, male, asian, stage:Stage II, dead, 97 days	218.2
TCGA-DD-A4NE-01A	75 years, female, white, stage:Stage IIIA, dead, 660 days	214.6
TCGA-YA-A8S7-01A	68 years, male, white, stage:Stage IIIA, dead, 412 days	212.1
TCGA-K7-AAU7-01A	61 years, male, white, stage:Stage II, alive, 359 days	211.7
TCGA-DD-A1EC-01A	20 years, female, white, stage:Stage I, alive, 602 days	210.0
TCGA-CC-5259-01A	60 years, female, asian, stage:Stage IIIC, alive, 250 days	209.7
TCGA-DD-A114-01A	42 years, male, black or african american, stage:Stage II, dead, 1149 days	209.3
TCGA-DD-A4NO-01A	65 years, male, white, stage:Stage I, alive, 2245 days	206.9
TCGA-ED-A82E-01A	60 years, female, asian, stage:Stage IIIA, alive, 408 days	206.3
TCGA-FV-A3R2-01A	75 years, male, white, stage:Stage I, dead, 194 days	204.7
TCGA-DD-AAD5-01A	54 years, male, asian, stage:Stage I, alive, 1345 days	201.1
TCGA-CC-5258-01A	48 years, male, asian, stage:Stage II, dead, 129 days	199.6
TCGA-BC-A10W-01A	50 years, male, asian, stage:'--, dead, 91 days	199.6
TCGA-BC-A10Q-01A	72 years, female, white, stage:'--, dead, 1135 days	194.0
TCGA-DD-A3A6-01A	72 years, female, white, stage:Stage II, dead, 3258 days	190.3
TCGA-DD-AAE0-01A	45 years, female, asian, stage:Stage IIIA, alive, 555 days	183.9
TCGA-BC-A112-01A	80 years, male, white, stage:'--, dead, 153 days	183.1
TCGA-ED-A97K-01A	54 years, male, asian, stage:Stage IIIA, alive, 6 days	181.3
TCGA-G3-A5SJ-01A	59 years, male, white, stage:Stage I, alive, 698 days	180.8
TCGA-FV-A3I0-01A	76 years, female, white, stage:Stage II, alive, 848 days	174.3
TCGA-CC-A7IE-01A	57 years, male, asian, stage:Stage IIIA, dead, 217 days	170.7
TCGA-DD-AAED-01A	51 years, male, asian, stage:Stage I, alive, 763 days	170.4
TCGA-CC-A3M9-01A	45 years, male, asian, stage:Stage IIIA, dead, 300 days	166.2
TCGA-MR-A8JO-01A	34 years, male, white, stage:Stage I, alive, 330 days	160.1
TCGA-CC-A3MA-01A	61 years, male, asian, stage:Stage IIIA, dead, 303 days	157.8
TCGA-DD-AADN-01A	59 years, male, asian, stage:Stage I, alive, 898 days	155.1
TCGA-CC-A1HT-01A	50 years, male, asian, stage:Stage IIIA, dead, 101 days	155.1
TCGA-G3-A25X-01A	73 years, male, asian, stage:Stage II, alive, 1779 days	152.9
TCGA-DD-A4NA-01A	67 years, female, white, stage:Stage IIIC, alive, 1008 days	133.6
TCGA-DD-AACZ-01A	63 years, female, asian, stage:Stage I, dead, 171 days	127.7
TCGA-ED-A66Y-01A	51 years, female, asian, stage:Stage IIIA, dead, 296 days	123.3
TCGA-CC-A7II-01A	54 years, male, asian, stage:Stage IIIA, alive, 399 days	121.4
TCGA-CC-5260-01A	61 years, female, asian, stage:Stage IIIC, dead, 87 days	91.2
Show allShow less

LIVER HEPATOCELLULAR CARCINOMA (VALIDATION) - Interactive survival scatter plotⁱ

& Survival analysisⁱ

ECHS1 is not prognostic in Liver Hepatocellular Carcinoma (validation)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 468

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average pTPM

487.8

Number of samples

231

Samples

Sample	Description	pTPM
DO48719	80 years, male, NA, stage:2, alive, 690 days	1524.8
DO227643	79 years, male, NA, stage:2, alive, 1260 days	1281.1
DO45177	81 years, female, NA, stage:3, alive, 1260 days	1253.5
DO50783	62 years, male, NA, stage:3, alive, 480 days	1205.0
DO48674	80 years, male, NA, stage:2, alive, 1260 days	1185.3
DO23508	79 years, female, NA, stage:2, alive, 390 days	1161.1
DO50825	70 years, male, NA, stage:2, alive, 390 days	1149.1
DO48759	73 years, male, NA, stage:3, alive, 720 days	1134.3
DO45171	56 years, male, NA, stage:3, alive, 600 days	1089.8
DO45159	65 years, male, NA, stage:3, alive, 1470 days	1028.3
DO45107	63 years, female, NA, stage:2, alive, 1710 days	1014.2
DO45215	65 years, male, NA, stage:2, alive, 1170 days	1012.6
DO48695	77 years, male, NA, stage:2, alive, 720 days	1006.8
DO45115	81 years, male, NA, stage:2, alive, 840 days	998.2
DO45281	83 years, male, NA, stage:4, alive, 750 days	992.8
DO45129	61 years, male, NA, stage:3, alive, 1470 days	964.1
DO45101	63 years, male, NA, stage:2, alive, 1680 days	944.1
DO50839	47 years, female, NA, stage:3, alive, 330 days	938.4
DO50798	77 years, male, NA, stage:3, dead, 30 days	907.4
DO45121	61 years, male, NA, stage:3, alive, 1530 days	877.0
DO45255	81 years, male, NA, stage:3, alive, 720 days	873.8
DO50817	75 years, male, NA, stage:2, alive, 390 days	855.0
DO23548	78 years, female, NA, stage:1, alive, 840 days	835.0
DO23514	64 years, male, NA, stage:2, alive, 1290 days	828.9
DO50776	75 years, male, NA, stage:1, alive, 690 days	824.4
DO45094	76 years, male, NA, stage:3, alive, 1650 days	808.8
DO45253	50 years, male, NA, stage:2, alive, 870 days	807.5
DO50818	65 years, male, NA, stage:2, alive, 510 days	801.5
DO48760	70 years, female, NA, stage:2, alive, 690 days	797.8
DO48706	72 years, male, NA, stage:2, alive, 870 days	777.4
DO45092	62 years, male, NA, stage:4, dead, 1200 days	775.2
DO45227	57 years, female, NA, stage:2, alive, 1020 days	774.3
DO23539	77 years, male, NA, stage:1, alive, 1110 days	770.5
DO45143	69 years, male, NA, stage:3, alive, 1290 days	767.6
DO23546	63 years, male, NA, stage:2, alive, 1050 days	757.9
DO50802	49 years, male, NA, stage:2, alive, 930 days	746.6
DO45235	68 years, female, NA, stage:1, alive, 900 days	743.3
DO23525	71 years, male, NA, stage:4, alive, 1050 days	733.8
DO48712	50 years, male, NA, stage:2, alive, 810 days	727.2
DO45097	69 years, male, NA, stage:3, alive, 1620 days	727.1
DO48677	58 years, male, NA, stage:3, alive, 1140 days	724.3
DO45181	84 years, female, NA, stage:2, alive, 1200 days	716.4
DO50816	63 years, male, NA, stage:2, alive, 390 days	715.6
DO45096	69 years, male, NA, stage:2, dead, 1290 days	715.1
DO48697	64 years, female, NA, stage:2, dead, 810 days	710.3
DO23517	62 years, male, NA, stage:2, alive, 1200 days	706.7
DO23544	67 years, male, NA, stage:2, alive, 960 days	705.3
DO45123	78 years, female, NA, stage:2, dead, 570 days	696.6
DO48737	52 years, male, NA, stage:1, alive, 720 days	694.9
DO50811	62 years, male, NA, stage:1, alive, 450 days	690.1
DO23512	60 years, male, NA, stage:1, alive, 1260 days	687.5
DO23532	71 years, female, NA, stage:1, alive, 960 days	684.8
DO45093	71 years, male, NA, stage:2, dead, 720 days	680.3
DO48693	71 years, male, NA, stage:2, alive, 900 days	677.3
DO45167	67 years, male, NA, stage:2, dead, 1440 days	675.4
DO48757	68 years, female, NA, stage:3, alive, 480 days	665.9
DO45195	62 years, male, NA, stage:1, alive, 390 days	657.8
DO45179	78 years, female, NA, stage:2, alive, 600 days	647.2
DO45261	74 years, male, NA, stage:3, alive, 990 days	641.3
DO48672	81 years, male, NA, stage:2, alive, 450 days	640.2
DO50859	77 years, male, NA, stage:2, alive, 180 days	639.9
DO23528	45 years, female, NA, stage:2, alive, 1020 days	638.3
DO45109	63 years, male, NA, stage:2, alive, 1590 days	614.7
DO50840	49 years, male, NA, stage:2, alive, 330 days	613.8
DO48742	76 years, male, NA, stage:2, alive, 600 days	608.5
DO23531	78 years, female, NA, stage:3, alive, 900 days	596.7
DO48736	76 years, female, NA, stage:1, alive, 600 days	588.1
DO50805	72 years, male, NA, stage:2, alive, 690 days	574.1
DO50787	63 years, male, NA, stage:3, alive, 480 days	570.0
DO23549	74 years, male, NA, stage:3, alive, 990 days	568.0
DO45113	58 years, male, NA, stage:3, alive, 1560 days	566.8
DO23542	66 years, male, NA, stage:3, alive, 960 days	565.3
DO23526	66 years, male, NA, stage:3, alive, 1050 days	559.9
DO23527	72 years, male, NA, stage:1, alive, 1050 days	559.9
DO23516	69 years, male, NA, stage:3, dead, 20 days	557.6
DO50814	83 years, male, NA, stage:3, alive, 420 days	554.0
DO48704	68 years, female, NA, stage:3, alive, 750 days	537.6
DO45153	77 years, female, NA, stage:2, alive, 1380 days	536.5
DO50809	56 years, male, NA, stage:3, dead, 720 days	534.9
DO50808	68 years, male, NA, stage:2, alive, 570 days	534.7
DO23538	67 years, male, NA, stage:2, alive, 450 days	534.1
DO45173	63 years, male, NA, stage:3, alive, 1170 days	532.2
DO50804	81 years, male, NA, stage:2, alive, 720 days	523.9
DO45193	68 years, female, NA, stage:4, dead, 120 days	518.1
DO23510	80 years, female, NA, stage:2, alive, 870 days	516.7
DO45125	58 years, male, NA, stage:3, alive, 1680 days	514.3
DO227801	77 years, female, NA, stage:1, alive, 660 days	514.0
DO48716	71 years, male, NA, stage:2, alive, 720 days	513.3
DO45099	46 years, male, NA, stage:3, alive, 1590 days	512.1
DO48743	69 years, female, NA, stage:2, alive, 570 days	510.9
DO48761	55 years, male, NA, stage:2, alive, 870 days	507.9
DO50800	74 years, male, NA, stage:2, alive, 510 days	506.2
DO48725	66 years, male, NA, stage:1, alive, 780 days	504.8
DO45117	73 years, female, NA, stage:2, dead, 1110 days	504.5
DO23534	60 years, male, NA, stage:2, alive, 840 days	496.2
DO48733	72 years, male, NA, stage:2, alive, 600 days	491.0
DO48701	78 years, male, NA, stage:2, alive, 780 days	489.2
DO48721	58 years, female, NA, stage:1, alive, 900 days	485.0
DO45229	74 years, male, NA, stage:1, alive, 990 days	483.9
DO45141	73 years, male, NA, stage:2, alive, 1320 days	476.6
DO48723	73 years, male, NA, stage:1, alive, 600 days	473.1
DO45111	74 years, male, NA, stage:2, alive, 1590 days	471.0
DO50829	78 years, male, NA, stage:3, alive, 570 days	469.3
DO45103	47 years, male, NA, stage:3, alive, 450 days	468.0
DO45131	53 years, male, NA, stage:4, dead, 360 days	462.1
DO23551	73 years, male, NA, stage:3, dead, 150 days	458.9
DO45095	66 years, male, NA, stage:2, alive, 1620 days	456.9
DO45219	78 years, male, NA, stage:2, alive, 1080 days	455.7
DO50832	73 years, male, NA, stage:3, alive, 90 days	455.5
DO23511	83 years, female, NA, stage:3, dead, 180 days	455.3
DO45183	72 years, female, NA, stage:2, dead, 570 days	454.8
DO48727	81 years, female, NA, stage:2, dead, 390 days	442.3
DO45157	62 years, male, NA, stage:2, alive, 1980 days	438.1
DO23513	76 years, male, NA, stage:3, alive, 1200 days	437.1
DO50855	47 years, male, NA, stage:2, alive, 570 days	432.0
DO45257	46 years, male, NA, stage:3, alive, 810 days	427.5
DO45259	65 years, male, NA, stage:3, alive, 330 days	426.4
DO48679	72 years, male, NA, stage:2, alive, 1200 days	424.6
DO45233	83 years, male, NA, stage:3, alive, 900 days	417.9
DO50774	68 years, female, NA, stage:2, alive, 720 days	416.0
DO50807	67 years, male, NA, stage:1, alive, 540 days	415.3
DO45201	49 years, male, NA, stage:1, alive, 900 days	413.3
DO45165	75 years, male, NA, stage:2, alive, 690 days	411.1
DO50793	76 years, male, NA, stage:4, alive, 540 days	409.2
DO50857	72 years, male, NA, stage:2, alive, 210 days	403.5
DO48700	78 years, female, NA, stage:2, alive, 810 days	399.8
DO45267	73 years, male, NA, stage:3, dead, 570 days	395.5
DO23540	73 years, male, NA, stage:1, alive, 750 days	393.5
DO23550	69 years, male, NA, stage:1, alive, 990 days	387.8
DO45197	51 years, male, NA, stage:2, alive, 1170 days	385.4
DO45243	74 years, female, NA, stage:3, alive, 930 days	383.6
DO23509	60 years, male, NA, stage:3, dead, 780 days	383.0
DO48751	68 years, male, NA, stage:2, dead, 480 days	380.1
DO50799	66 years, female, NA, stage:2, alive, 540 days	378.5
DO23543	63 years, male, NA, stage:2, alive, 1020 days	378.3
DO48717	54 years, male, NA, stage:4, dead, 180 days	375.3
DO50789	73 years, female, NA, stage:2, alive, 570 days	371.3
DO50819	72 years, female, NA, stage:2, alive, 510 days	369.3
DO45169	74 years, male, NA, stage:3, alive, 1350 days	367.5
DO50822	66 years, male, NA, stage:2, alive, 510 days	358.8
DO48746	76 years, male, NA, stage:3, alive, 570 days	356.3
DO23535	67 years, male, NA, stage:1, alive, 960 days	355.6
DO23533	61 years, male, NA, stage:2, alive, 900 days	353.7
DO23518	67 years, male, NA, stage:2, alive, 1320 days	353.0
DO45237	58 years, male, NA, stage:2, alive, 900 days	352.7
DO50850	74 years, male, NA, stage:3, alive, 720 days	352.2
DO45223	67 years, male, NA, stage:4, alive, 1020 days	351.0
DO45241	49 years, male, NA, stage:1, alive, 1080 days	347.6
DO45133	64 years, male, NA, stage:3, dead, 660 days	344.3
DO45135	77 years, male, NA, stage:1, alive, 1410 days	342.9
DO45207	68 years, male, NA, stage:1, alive, 1050 days	339.1
DO45149	70 years, female, NA, stage:2, alive, 1260 days	337.6
DO45185	89 years, male, NA, stage:2, alive, 600 days	333.6
DO23541	65 years, male, NA, stage:2, alive, 930 days	331.8
DO45217	69 years, female, NA, stage:3, dead, 270 days	328.9
DO50806	70 years, male, NA, stage:4, alive, 540 days	326.8
DO23536	56 years, male, NA, stage:2, alive, 930 days	326.1
DO45213	58 years, male, NA, stage:1, alive, 1200 days	325.9
DO45175	74 years, male, NA, stage:2, alive, 1140 days	323.3
DO45221	75 years, female, NA, stage:4, dead, 390 days	321.8
DO50785	37 years, male, NA, stage:4, dead, 90 days	321.5
DO48741	64 years, male, NA, stage:3, alive, 240 days	318.9
DO45299	70 years, female, NA, stage:1, alive, 1440 days	316.4
DO45191	61 years, female, NA, stage:2, alive, 1200 days	308.2
DO45209	70 years, male, NA, stage:4, alive, 1350 days	308.1
DO45161	74 years, male, NA, stage:2, dead, 540 days	303.1
DO45137	38 years, male, NA, stage:1, alive, 1320 days	298.6
DO45163	76 years, male, NA, stage:2, alive, 960 days	298.6
DO50803	62 years, female, NA, stage:1, alive, 540 days	297.8
DO45231	84 years, male, NA, stage:2, alive, 930 days	293.0
DO23524	71 years, female, NA, stage:2, alive, 1050 days	288.0
DO48747	62 years, male, NA, stage:3, alive, 540 days	286.4
DO45275	65 years, male, NA, stage:3, dead, 10 days	279.5
DO45119	74 years, male, NA, stage:3, dead, 510 days	279.0
DO48730	73 years, female, NA, stage:2, alive, 630 days	278.2
DO23519	65 years, male, NA, stage:3, alive, 630 days	277.6
DO23515	71 years, male, NA, stage:2, alive, 1230 days	276.6
DO50820	77 years, female, NA, stage:3, alive, 510 days	276.2
DO50813	56 years, male, NA, stage:2, alive, 420 days	271.7
DO45199	86 years, female, NA, stage:2, alive, 1350 days	271.0
DO45127	73 years, male, NA, stage:3, dead, 420 days	267.0
DO45287	74 years, male, NA, stage:1, alive, 390 days	266.3
DO45155	69 years, male, NA, stage:2, alive, 2160 days	265.5
DO45203	71 years, female, NA, stage:2, alive, 1170 days	263.7
DO48720	62 years, female, NA, stage:2, alive, 570 days	262.4
DO45273	62 years, male, NA, stage:2, alive, 480 days	261.2
DO45247	31 years, female, NA, stage:2, alive, 210 days	257.0
DO45249	57 years, male, NA, stage:1, alive, 630 days	255.5
DO50791	79 years, female, NA, stage:1, dead, 480 days	254.2
DO23529	72 years, male, NA, stage:4, alive, 930 days	249.4
DO23537	79 years, male, NA, stage:2, dead, 900 days	246.4
DO50815	62 years, male, NA, stage:3, alive, 150 days	245.9
DO50844	75 years, male, NA, stage:4, alive, 300 days	244.3
DO45225	69 years, male, NA, stage:1, alive, 1050 days	235.4
DO48682	72 years, female, NA, stage:3, dead, 120 days	234.2
DO45301	56 years, male, NA, stage:2, dead, 1440 days	234.2
DO45211	76 years, male, NA, stage:3, alive, 240 days	233.3
DO45187	32 years, female, NA, stage:1, alive, 1260 days	231.5
DO48728	74 years, female, NA, stage:2, alive, 150 days	231.4
DO45263	67 years, male, NA, stage:3, dead, 270 days	225.8
DO45091	56 years, male, NA, stage:2, dead, 1320 days	225.1
DO23545	67 years, male, NA, stage:2, dead, 570 days	221.1
DO45105	61 years, male, NA, stage:1, alive, 1680 days	220.8
DO50845	72 years, male, NA, stage:3, alive, 210 days	219.6
DO48681	57 years, male, NA, stage:2, alive, 900 days	218.4
DO45139	63 years, male, NA, stage:3, alive, 1320 days	212.7
DO45303	62 years, female, NA, stage:3, alive, 990 days	212.3
DO45283	60 years, male, NA, stage:3, alive, 510 days	207.6
DO45251	57 years, female, NA, stage:2, alive, 900 days	206.9
DO45189	85 years, female, NA, stage:2, alive, 1200 days	200.0
DO45269	59 years, male, NA, stage:3, alive, 750 days	198.3
DO45307	54 years, female, NA, stage:4, dead, 240 days	197.0
DO23547	74 years, male, NA, stage:1, alive, 1020 days	195.8
DO45305	66 years, male, NA, stage:4, alive, 300 days	192.6
DO45239	42 years, male, NA, stage:2, alive, 870 days	192.2
DO45289	78 years, female, NA, stage:3, alive, 360 days	188.9
DO48715	58 years, female, NA, stage:2, dead, 690 days	181.8
DO23521	63 years, male, NA, stage:3, alive, 1110 days	181.7
DO23530	53 years, male, NA, stage:4, dead, 180 days	178.7
DO45205	67 years, female, NA, stage:2, dead, 90 days	172.8
DO45277	64 years, male, NA, stage:3, alive, 600 days	166.0
DO50778	60 years, male, NA, stage:4, alive, 630 days	163.0
DO23552	80 years, female, NA, stage:1, alive, 810 days	154.6
DO48732	73 years, male, NA, stage:3, alive, 630 days	153.5
DO45245	75 years, female, NA, stage:2, dead, 240 days	151.1
DO45285	59 years, male, NA, stage:3, alive, 480 days	146.8
DO45265	73 years, male, NA, stage:3, alive, 1020 days	142.0
DO45145	78 years, male, NA, stage:3, dead, 60 days	128.6
DO45279	67 years, male, NA, stage:3, alive, 1290 days	125.6
DO23523	52 years, male, NA, stage:3, alive, 1080 days	125.1
DO45297	61 years, female, NA, stage:4, dead, 1260 days	111.1
Show allShow less

LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)

Number of samples

330

Samples

Sample ID	Sample type	nRPX
925	Tumor	1.1
698	Normal	1.0
484	Normal	0.8
746	Normal	0.8
128	Normal	0.8
534	Normal	0.8
627	Tumor	0.8
488	Normal	0.7
915	Tumor	0.7
924	Normal	0.7
465	Tumor	0.7
755	Tumor	0.7
922	Normal	0.7
1046	Normal	0.7
452	Normal	0.7
1026	Normal	0.7
862	Normal	0.7
982	Normal	0.7
636	Normal	0.7
436	Normal	0.6
462	Normal	0.6
412	Normal	0.6
714	Normal	0.6
738	Normal	0.6
1022	Normal	0.6
554	Normal	0.6
742	Normal	0.6
1032	Normal	0.6
172	Normal	0.6
618	Normal	0.6
728	Normal	0.6
526	Normal	0.6
964	Normal	0.6
546	Normal	0.6
938	Normal	0.6
328	Normal	0.6
882	Normal	0.6
1016	Normal	0.5
868	Normal	0.5
482	Normal	0.5
864	Normal	0.5
926	Normal	0.5
914	Normal	0.5
723	Tumor	0.5
944	Normal	0.5
1014	Normal	0.5
518	Normal	0.5
298	Normal	0.5
786	Normal	0.5
976	Normal	0.5
222	Normal	0.5
466	Normal	0.5
648	Normal	0.5
756	Normal	0.5
472	Normal	0.5
448	Normal	0.5
858	Normal	0.5
744	Normal	0.5
394	Normal	0.5
824	Normal	0.5
162	Normal	0.5
955	Tumor	0.5
286	Normal	0.5
696	Normal	0.4
342	Normal	0.4
356	Normal	0.4
716	Normal	0.4
878	Normal	0.4
918	Normal	0.4
314	Normal	0.4
874	Normal	0.4
966	Normal	0.4
816	Normal	0.4
866	Normal	0.4
912	Normal	0.4
376	Normal	0.4
981	Tumor	0.4
416	Normal	0.4
474	Normal	0.4
196	Normal	0.4
358	Normal	0.4
186	Normal	0.4
364	Normal	0.4
111	Normal	0.4
528	Normal	0.4
686	Normal	0.4
664	Normal	0.4
568	Normal	0.4
494	Normal	0.4
132	Normal	0.3
392	Normal	0.3
142	Normal	0.3
278	Normal	0.3
1042	Normal	0.3
332	Normal	0.3
952	Normal	0.3
414	Normal	0.3
818	Normal	0.3
258	Normal	0.3
572	Normal	0.3
428	Normal	0.3
778	Normal	0.3
968	Normal	0.3
722	Normal	0.3
911	Tumor	0.3
984	Normal	0.3
1028	Normal	0.3
956	Normal	0.3
424	Normal	0.3
148	Normal	0.3
232	Normal	0.3
426	Normal	0.3
366	Normal	0.3
564	Normal	0.2
642	Normal	0.2
978	Normal	0.2
628	Normal	0.2
481	Tumor	0.2
231	Tumor	0.2
446	Normal	0.2
422	Normal	0.2
344	Normal	0.2
616	Normal	0.2
884	Normal	0.2
114	Normal	0.2
284	Normal	0.2
218	Normal	0.2
741	Tumor	0.2
228	Normal	0.2
396	Normal	0.2
516	Normal	0.2
514	Normal	0.2
388	Normal	0.2
916	Normal	0.2
1044	Normal	0.2
212	Normal	0.2
852	Normal	0.2
214	Normal	0.2
553	Tumor	0.1
954	Normal	0.1
327	Tumor	0.1
1027	Tumor	0.1
354	Normal	0.1
666	Normal	0.1
136	Normal	0.1
138	Normal	0.1
958	Normal	0.1
558	Normal	0.1
468	Normal	0.1
262	Normal	0.1
432	Normal	0.1
695	Tumor	0.1
312	Normal	0.1
423	Tumor	0.1
662	Normal	0.1
362	Normal	0.1
867	Tumor	0.0
352	Normal	0.0
261	Tumor	0.0
574	Normal	0.0
513	Tumor	0.0
124	Normal	0.0
1041	Tumor	0.0
492	Normal	0.0
1043	Tumor	0.0
464	Normal	0.0
456	Normal	0.0
615	Tumor	0.0
434	Normal	-0.1
272	Normal	-0.1
538	Normal	-0.1
171	Tumor	-0.1
393	Tumor	-0.1
785	Tumor	-0.1
368	Normal	-0.1
478	Normal	-0.1
883	Tumor	-0.1
921	Tumor	-0.1
483	Tumor	-0.1
477	Tumor	-0.1
1013	Tumor	-0.1
685	Tumor	-0.1
146	Normal	-0.1
126	Normal	-0.1
524	Normal	-0.1
515	Tumor	-0.1
224	Normal	-0.1
411	Tumor	-0.2
451	Tumor	-0.3
415	Tumor	-0.3
1045	Tumor	-0.3
1025	Tumor	-0.3
745	Tumor	-0.3
937	Tumor	-0.3
386	Normal	-0.3
123	Tumor	-0.3
461	Tumor	-0.3
188	Normal	-0.3
268	Normal	-0.3
223	Tumor	-0.3
861	Tumor	-0.3
127	Tumor	-0.3
498	Normal	-0.4
536	Normal	-0.4
873	Tumor	-0.4
672	Normal	-0.4
384	Normal	-0.4
721	Tumor	-0.5
953	Tumor	-0.5
341	Tumor	-0.5
563	Tumor	-0.5
857	Tumor	-0.5
823	Tumor	-0.5
267	Tumor	-0.5
977	Tumor	-0.5
257	Tumor	-0.5
523	Tumor	-0.6
963	Tumor	-0.6
487	Tumor	-0.6
567	Tumor	-0.6
444	Normal	-0.6
271	Tumor	-0.6
361	Tumor	-0.6
863	Tumor	-0.6
881	Tumor	-0.6
145	Tumor	-0.6
777	Tumor	-0.7
217	Tumor	-0.7
365	Tumor	-0.7
571	Tumor	-0.7
192	Normal	-0.7
185	Tumor	-0.7
357	Tumor	-0.7
965	Tumor	-0.7
435	Tumor	-0.7
1031	Tumor	-0.8
635	Tumor	-0.8
471	Tumor	-0.8
975	Tumor	-0.8
533	Tumor	-0.8
491	Tumor	-0.8
517	Tumor	-0.8
473	Tumor	-0.8
431	Tumor	-0.8
557	Tumor	-0.8
1021	Tumor	-0.8
135	Tumor	-0.9
195	Tumor	-0.9
957	Tumor	-0.9
537	Tumor	-0.9
923	Tumor	-0.9
112	Tumor	-0.9
363	Tumor	-0.9
727	Tumor	-0.9
147	Tumor	-0.9
1015	Tumor	-0.9
221	Tumor	-0.9
967	Tumor	-0.9
421	Tumor	-1.0
141	Tumor	-1.0
943	Tumor	-1.0
187	Tumor	-1.0
455	Tumor	-1.0
713	Tumor	-1.0
493	Tumor	-1.0
865	Tumor	-1.0
227	Tumor	-1.0
443	Tumor	-1.0
297	Tumor	-1.0
647	Tumor	-1.0
355	Tumor	-1.0
817	Tumor	-1.0
814	Normal	-1.0
743	Tumor	-1.1
497	Tumor	-1.1
137	Tumor	-1.1
447	Tumor	-1.1
951	Tumor	-1.1
433	Tumor	-1.1
113	Tumor	-1.1
525	Tumor	-1.1
641	Tumor	-1.1
737	Tumor	-1.1
191	Tumor	-1.2
617	Tumor	-1.2
917	Tumor	-1.2
353	Tumor	-1.2
391	Tumor	-1.2
131	Tumor	-1.2
527	Tumor	-1.2
715	Tumor	-1.2
913	Tumor	-1.3
813	Tumor	-1.3
161	Tumor	-1.3
445	Tumor	-1.3
387	Tumor	-1.3
851	Tumor	-1.4
213	Tumor	-1.4
663	Tumor	-1.4
697	Tumor	-1.4
425	Tumor	-1.4
313	Tumor	-1.4
427	Tumor	-1.5
665	Tumor	-1.5
125	Tumor	-1.5
573	Tumor	-1.5
277	Tumor	-1.5
535	Tumor	-1.6
877	Tumor	-1.6
467	Tumor	-1.6
383	Tumor	-1.6
367	Tumor	-1.6
331	Tumor	-1.7
815	Tumor	-1.7
413	Tumor	-1.7
983	Tumor	-1.7
724	Normal	-1.7
545	Tumor	-1.8
285	Tumor	-1.8
463	Tumor	-1.8
375	Tumor	-1.9
311	Tumor	-1.9
343	Tumor	-1.9
395	Tumor	-2.0
671	Tumor	-2.0
351	Tumor	-2.1
283	Tumor	-2.2
211	Tumor	-2.2
385	Tumor	-2.3
661	Tumor	-2.4
Show allShow less

LIVER CANCER - Protein expressionⁱ A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here. Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

Antibody stainingⁱ Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.	Antibody HPA021995	Antibody HPA022476	Antibody CAB003783
Staining
High
Medium
Low
Not detected
Intensity
Strong
Moderate
Weak
Negative
Quantity
>75%
75%-25%
<25%
None
Location
Nuclear
Cytoplasmic/membranous
Cytoplasmic/membranous,nuclear
None
Cholangiocarcinoma
Carcinoma, Hepatocellular, NOS