PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:438.0 nTPM
FANTOM5:591.0 Scaled Tags Per Million
Pig:736.9 nTPM
Mouse:765.5 nTPM
Allen mouse:12.2 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 438.0
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 213.9
1984 Male, age 76, both hemispheres 239.9
2188 Female, age 91, both hemispheres 215.3
2301 Female, age 85, both hemispheres 215.3
2090 Male, age 80, both hemispheres 185.2
Area postrema
nTPM: 133.8
2054 Male, age 76, both hemispheres 215.9
2306 Male, age 80, both hemispheres 99.5
2799 Male, age 61, both hemispheres 85.9
Dorsal cochlear nucleus
nTPM: 208.8
2187 Female, age 91, both hemispheres 265.2
2802 Male, age 74, right hemisphere 217.4
2058 Male, age 76, both hemispheres 216.9
2370 Male, age 61, both hemispheres 184.0
2378 Male, age 80, both hemispheres 160.6
Dorsal medullary reticular nucleus
nTPM: 273.6
2040 Female, age 85, both hemispheres 434.0
2088 Male, age 76, both hemispheres 193.6
2373 Male, age 61, both hemispheres 193.3
Dorsal motor vagal complex
nTPM: 255.8
2133 Female, age 91, both hemispheres 461.4
2000 Male, age 74, unknown 351.3
2844 Male, age 55, unknown 299.0
2813 Female, age 72, unknown 290.1
2643 Male, age 74, both hemispheres 213.2
2807 Female, age 85, both hemispheres 176.6
2185 Male, age 76, both hemispheres 140.8
2797 Male, age 61, both hemispheres 113.6
Dorsal tegmental nucleus
nTPM: 231.4
2083 Male, age 80, both hemispheres 244.1
2326 Male, age 74, both hemispheres 234.4
2358 Male, age 61, both hemispheres 231.4
1936 Male, age 76, left hemisphere 215.7
Dorsolateral tegmental area
nTPM: 230.7
2751 Female, age 85, both hemispheres 258.3
2360 Male, age 74, both hemispheres 252.0
2141 Male, age 76, both hemispheres 246.8
2654 Male, age 80, both hemispheres 240.6
2337 Male, age 61, both hemispheres 155.7
Gigantocellular reticular nuclei, medullary
nTPM: 267.6
2462 Male, age 74, both hemispheres 449.5
1876 Female, age 85, both hemispheres 270.7
2022 Male, age 76, right hemisphere 252.6
2310 Male, age 80, both hemispheres 249.3
2387 Female, age 91, both hemispheres 203.0
2314 Male, age 61, both hemispheres 180.5
Gigantocellular reticular nuclei, pars
nTPM: 311.0
2168 Male, age 76, both hemispheres 454.5
2084 Female, age 85, both hemispheres 336.5
2336 Male, age 61, both hemispheres 291.4
2706 Male, age 80, both hemispheres 242.2
2330 Male, age 80, both hemispheres 230.3
Inferior olive
nTPM: 197.5
2085 Female, age 85, both hemispheres 304.9
2563 Male, age 74, both hemispheres 219.1
2628 Female, age 91, both hemispheres 171.3
2178 Male, age 61, both hemispheres 147.0
2379 Male, age 80, both hemispheres 145.3
Kolliker-Fuse nucleus
nTPM: 276.2
2163 Male, age 80, both hemispheres 374.4
2793 Female, age 91, left hemisphere 249.2
2315 Male, age 76, right hemisphere 205.0
Lateral lemniscal nuclei
nTPM: 370.5
2169 Male, age 76, both hemispheres 491.4
2036 Male, age 80, both hemispheres 390.4
2453 Male, age 74, right hemisphere 377.1
2746 Female, age 85, left hemisphere 375.4
2320 Female, age 91, left hemisphere 218.2
Lateral medullary reticular nucleus
nTPM: 254.2
2044 Male, age 76, both hemispheres 360.0
2305 Male, age 74, both hemispheres 359.5
2190 Female, age 85, both hemispheres 238.4
2374 Male, age 61, both hemispheres 211.8
2804 Female, age 91, both hemispheres 209.0
2852 Male, age 80, both hemispheres 146.3
Lateral parabrachial nucleus
nTPM: 269.7
2139 Female, age 85, right hemisphere 423.2
2013 Male, age 80, both hemispheres 282.0
2790 Male, age 61, both hemispheres 219.2
2792 Male, age 76, both hemispheres 154.5
Lateral vestibular nucleus
nTPM: 285.8
2184 Male, age 76, both hemispheres 366.5
2311 Male, age 80, both hemispheres 205.0
Locus coeruleus
nTPM: 417.7
2720 Male, age 74, both hemispheres 539.4
2123 Female, age 91, both hemispheres 529.9
2014 Male, age 55, unknown 441.9
2788 Male, age 74, unknown 421.4
1980 Male, age 76, both hemispheres 351.4
2317 Female, age 72, unknown 327.8
2162 Male, age 80, both hemispheres 312.4
Medial olivary nucleus
nTPM: 147.9
2851 Male, age 80, both hemispheres 177.2
1962 Male, age 76, both hemispheres 161.1
2138 Female, age 91, both hemispheres 131.2
1943 Male, age 61, both hemispheres 122.0
Medial parabrachial nucleus
nTPM: 268.4
2854 Male, age 80, both hemispheres 329.1
2170 Female, age 91, both hemispheres 300.2
2156 Male, age 61, both hemispheres 258.8
2786 Male, age 76, both hemispheres 248.1
2463 Female, age 85, right hemisphere 205.6
Medial periolivary nuclei
nTPM: 337.3
2171 Female, age 85, both hemispheres 498.7
2063 Male, age 76, both hemispheres 451.5
2791 Male, age 74, right hemisphere 336.7
2081 Male, age 80, both hemispheres 210.8
2458 Female, age 91, both hemispheres 188.7
Medial vestibular nucleus
nTPM: 328.2
2134 Male, age 76, both hemispheres 435.8
2801 Male, age 74, both hemispheres 361.7
2743 Female, age 85, both hemispheres 338.7
2803 Female, age 91, both hemispheres 292.3
2624 Male, age 61, both hemispheres 286.6
2093 Male, age 80, both hemispheres 254.4
Motor facial nucleus
nTPM: 339.4
2062 Male, age 76, both hemispheres 490.0
2365 Male, age 74, right hemisphere 428.2
2697 Female, age 85, both hemispheres 344.6
2327 Male, age 80, both hemispheres 318.5
2126 Male, age 61, both hemispheres 246.2
2795 Female, age 91, both hemispheres 208.9
Motor hypoglossal nucleus
nTPM: 305.4
2461 Male, age 61, both hemispheres 434.7
2125 Female, age 91, both hemispheres 317.7
2132 Female, age 85, both hemispheres 312.5
2277 Male, age 76, both hemispheres 232.3
2182 Male, age 80, both hemispheres 229.9
Motor trigeminal nucleus
nTPM: 260.0
2079 Male, age 80, both hemispheres 340.7
2560 Male, age 74, both hemispheres 278.1
2309 Male, age 76, both hemispheres 239.6
2335 Male, age 61, both hemispheres 239.4
2321 Female, age 91, both hemispheres 202.4
Nuclei of the trapezoid body
nTPM: 404.8
2159 Male, age 61, both hemispheres 600.5
2735 Female, age 85, both hemispheres 503.3
1983 Male, age 76, both hemispheres 440.1
2166 Male, age 80, both hemispheres 294.2
2368 Female, age 91, both hemispheres 186.0
Nucleus ambiguus
nTPM: 209.3
2096 Female, age 85, both hemispheres 272.1
2071 Male, age 76, both hemispheres 146.4
Nucleus cuneatus
nTPM: 181.3
2131 Male, age 76, both hemispheres 272.3
2564 Male, age 74, both hemispheres 239.0
2376 Male, age 61, both hemispheres 216.0
2562 Male, age 61, both hemispheres 181.5
2100 Male, age 76, both hemispheres 177.2
2381 Male, age 80, both hemispheres 161.5
2808 Female, age 85, both hemispheres 135.0
2805 Female, age 91, both hemispheres 126.3
2380 Male, age 80, both hemispheres 122.9
Nucleus gracilis
nTPM: 157.3
2627 Male, age 74, both hemispheres 262.7
2382 Male, age 80, both hemispheres 106.9
2299 Female, age 85, both hemispheres 102.3
Nucleus raphe magnus
nTPM: 438.0
2160 Male, age 61, both hemispheres 706.5
2455 Male, age 74, both hemispheres 545.7
2172 Female, age 85, both hemispheres 524.6
2051 Male, age 76, both hemispheres 316.6
2328 Male, age 80, both hemispheres 314.8
2459 Female, age 91, both hemispheres 219.8
Nucleus raphe obscurus
nTPM: 205.1
2845 Female, age 85, midline 269.6
2800 Male, age 61, midline 256.6
2142 Male, age 76, midline 89.2
Nucleus raphe pallidus
nTPM: 242.1
2183 Male, age 80, midline 331.3
1924 Male, age 61, midline 279.8
2145 Male, age 76, midline 115.1
Nucleus tractus solitarii
nTPM: 271.9
2144 Female, age 91, right hemisphere 422.2
2656 Male, age 76, both hemispheres 256.6
2191 Female, age 85, both hemispheres 225.8
2307 Male, age 80, both hemispheres 182.8
Paramedian reticular nucleus
nTPM: 338.4
2050 Female, age 85, both hemispheres 453.8
2313 Male, age 61, both hemispheres 354.4
2057 Male, age 80, both hemispheres 297.4
2052 Male, age 76, both hemispheres 248.1
Parvicellular reticular nuclei
nTPM: 295.4
2558 Male, age 74, both hemispheres 323.1
2119 Male, age 80, both hemispheres 302.8
2095 Male, age 76, both hemispheres 260.4
Parvicellular reticular nuclei, medullary
nTPM: 324.7
2189 Female, age 91, both hemispheres 354.1
2091 Female, age 85, both hemispheres 352.5
2181 Male, age 80, left hemisphere 267.5
Pedunculopontine tegmental nucleus
nTPM: 290.1
1921 Female, age 85, both hemispheres 312.1
2334 Male, age 80, both hemispheres 292.1
2338 Male, age 61, both hemispheres 266.0
Peritrigeminal nucleus
nTPM: 300.9
2179 Male, age 61, both hemispheres 351.0
2136 Male, age 76, both hemispheres 289.5
2067 Female, age 85, both hemispheres 262.3
Pontine nuclei
nTPM: 416.6
2727 Male, age 61, right hemisphere 626.3
2787 Female, age 85, both hemispheres 544.4
1863 Male, age 55, unknown 537.4
2109 Female, age 72, unknown 419.9
1968 Male, age 76, left hemisphere 380.9
2454 Male, age 74, left hemisphere 336.0
2115 Male, age 80, left hemisphere 246.5
2319 Female, age 91, both hemispheres 241.6
Pontine raphe nucleus
nTPM: 387.4
2122 Female, age 85, midline 450.2
2853 Male, age 76, midline 324.5
Posteroventral cochlear nucleus
nTPM: 217.3
2752 Female, age 85, both hemispheres 318.5
2070 Male, age 76, both hemispheres 279.4
2371 Male, age 61, both hemispheres 179.4
2341 Male, age 80, both hemispheres 168.7
2135 Female, age 91, both hemispheres 140.4
Prepositus hypoglossal nucleus
nTPM: 257.8
2855 Female, age 85, right hemisphere 293.9
2086 Male, age 80, both hemispheres 221.7
Principal sensory trigeminal nucleus
nTPM: 392.8
2158 Male, age 61, both hemispheres 616.4
2008 Male, age 80, left hemisphere 422.3
2324 Male, age 76, both hemispheres 307.8
2367 Female, age 91, left hemisphere 224.9
Reticular pontine nucleus, caudal
nTPM: 281.3
2092 Male, age 76, both hemispheres 357.9
2332 Male, age 80, right hemisphere 343.7
2559 Male, age 74, both hemispheres 233.2
2457 Female, age 91, both hemispheres 190.2
Reticular pontine nucleus, oral
nTPM: 299.4
2012 Female, age 85, both hemispheres 408.3
2361 Male, age 74, both hemispheres 368.9
1939 Male, age 80, both hemispheres 266.9
2167 Male, age 76, both hemispheres 263.4
2366 Female, age 91, both hemispheres 189.4
Reticulotegmental nucleus
nTPM: 294.7
2325 Male, age 76, both hemispheres 389.6
2452 Male, age 74, both hemispheres 290.3
2322 Female, age 91, both hemispheres 250.8
2333 Male, age 80, both hemispheres 248.2
Spinal trigeminal nucleus, caudal
nTPM: 297.0
2390 Female, age 91, both hemispheres 547.0
2642 Male, age 74, both hemispheres 283.3
2447 Male, age 76, both hemispheres 268.1
2312 Male, age 61, both hemispheres 196.2
2308 Male, age 80, both hemispheres 190.3
Spinal trigeminal nucleus, interpolar
nTPM: 406.7
2625 Male, age 61, both hemispheres 637.2
2066 Male, age 76, right hemisphere 463.8
2389 Female, age 91, both hemispheres 328.9
2033 Male, age 80, both hemispheres 314.5
2386 Female, age 85, both hemispheres 288.8
Spinal trigeminal nucleus, oral
nTPM: 306.7
2737 Female, age 85, both hemispheres 330.8
2164 Male, age 80, both hemispheres 324.5
1978 Male, age 76, both hemispheres 264.7
Spinal vestibular nucleus
nTPM: 255.5
2186 Female, age 91, both hemispheres 303.7
2780 Male, age 80, both hemispheres 289.9
2806 Female, age 85, both hemispheres 256.2
2796 Male, age 61, both hemispheres 242.7
2748 Male, age 76, both hemispheres 235.2
2384 Male, age 74, both hemispheres 205.5
Subcoeruleus area
nTPM: 304.4
2323 Female, age 91, left hemisphere 398.9
1958 Male, age 80, both hemispheres 348.9
2089 Male, age 76, left hemisphere 326.0
2451 Male, age 74, both hemispheres 251.2
2369 Female, age 85, left hemisphere 196.9
Superior olive
nTPM: 361.8
1875 Female, age 85, both hemispheres 503.2
2364 Male, age 74, right hemisphere 419.4
2020 Male, age 76, both hemispheres 353.1
2329 Male, age 80, right hemisphere 284.4
2561 Female, age 91, both hemispheres 248.8
Superior vestibular nucleus
nTPM: 246.3
2015 Male, age 80, both hemispheres 264.2
2383 Male, age 74, both hemispheres 258.5
2061 Male, age 76, both hemispheres 216.0
Ventral medullary reticular nucleus
nTPM: 236.7
2060 Male, age 76, both hemispheres 241.2
2372 Male, age 61, both hemispheres 232.1
Ventral periolivary nuclei
nTPM: 376.1
2130 Female, age 85, both hemispheres 472.8
2165 Male, age 80, both hemispheres 399.0
2023 Male, age 76, both hemispheres 351.2
2794 Female, age 91, left hemisphere 281.5
Ventrolateral medulla, A1-C1 cell groups
nTPM: 258.5
2741 Female, age 85, both hemispheres 324.3
1986 Male, age 76, both hemispheres 302.1
2180 Male, age 61, both hemispheres 272.5
2302 Female, age 91, both hemispheres 210.0
2118 Male, age 80, both hemispheres 183.8
Ventrolateral tegmental area, A5 NE cell group
nTPM: 299.5
2449 Male, age 74, both hemispheres 438.1
2840 Female, age 85, both hemispheres 351.9
1959 Male, age 76, both hemispheres 347.8
2161 Male, age 80, both hemispheres 271.1
2359 Male, age 61, both hemispheres 232.8
2456 Female, age 91, both hemispheres 155.4

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 591.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 435.7
FF:10182-103D2 60 years, female 597.8
FF:10165-103B3 76 years, female 273.7
Medulla oblongata
Scaled Tags Per Million: 246.8
FF:10038-101F2 18-64 years, mixed 294.3
FF:10174-103C3 60 years, female 268.7
FF:10155-103A2 76 years, female 177.5
Pons
Scaled Tags Per Million: 591.0
FF:10033-101E6 18-54 years, mixed 591.0

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 736.9
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 430.7
Samples: 4

Max nTPM: 475.1
Min nTPM: 324.2
Sample A Female 463.3
Sample B Female 460.1
Sample C Male 475.1
Sample D Male 324.2
Pons
nTPM: 736.9
Samples: 4

Max nTPM: 1199.0
Min nTPM: 468.6
Sample A Female 1199.0
Sample B Female 468.6
Sample C Male 585.1
Sample D Male 694.8

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 765.5
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 765.5
Samples: 4

Max nTPM: 787.4
Min nTPM: 743.3
Sample A Male 762.8
Sample B Male 743.3
Sample C Female 787.4
Sample D Female 768.5

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 12.2
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 12.0
1127 Antisense, RP_Baylor_103128, Mouse strain C57BL/6J (56 days, male) 12.0
1128 Antisense, RP_Baylor_103128, Mouse strain C57BL/6J (56 days, male) 11.3
Pons
Expression energy: 12.2
1127 Antisense, RP_Baylor_103128, Mouse strain C57BL/6J (56 days, male) 12.2
1128 Antisense, RP_Baylor_103128, Mouse strain C57BL/6J (56 days, male) 10.7

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