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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:230.7 nTPM
HPA Brain:699.4 nTPM
GTEx:230.7 nTPM
FANTOM5:551.7 Scaled Tags Per Million
Pig:468.7 nTPM
Mouse:879.8 nTPM
Allen mouse:11.3 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody CAB025918
Glial cells Not detected
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

699.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 236.8
1781 Male, age 74, unknown 354.3
2846 Female, age 79, unknown 257.6
2288 Male, age 75, left hemisphere 240.3
1857 Female, age 85, left hemisphere 235.8
1854 Male, age 80, left hemisphere 233.7
2290 Female, age 72, unknown 203.0
2289 Male, age 61, right hemisphere 191.0
2481 Female, age 94, left hemisphere 179.0
Globus pallidus, externus
nTPM: 151.9
2395 Male, age 75, both hemispheres 264.4
2772 Female, age 79, unknown 224.4
1996 Male, age 80, right hemisphere 112.7
2646 Male, age 61, right hemisphere 85.9
2567 Female, age 72, unknown 72.1
Globus pallidus, internus
nTPM: 134.0
2287 Male, age 75, right hemisphere 181.0
2483 Female, age 94, right hemisphere 174.5
1818 Male, age 74, unknown 171.3
2037 Male, age 80, right hemisphere 118.3
2778 Female, age 91, both hemispheres 113.3
2566 Female, age 72, unknown 110.6
2111 Female, age 85, right hemisphere 69.1
Nucleus accumbens
nTPM: 252.9
1856 Female, age 91, right hemisphere 379.6
2824 Male, age 61, right hemisphere 300.0
1783 Male, age 74, unknown 289.5
2698 Female, age 72, unknown 255.9
2286 Male, age 75, left hemisphere 237.6
1806 Female, age 85, left hemisphere 233.1
2732 Male, age 80, right hemisphere 177.1
2391 Female, age 94, left hemisphere 150.1
Nucleus basalis of Meynert
nTPM: 192.2
2821 Male, age 75, both hemispheres 298.7
2484 Female, age 94, left hemisphere 199.6
2393 Male, age 80, right hemisphere 188.2
2569 Male, age 61, both hemispheres 82.5
Nucleus of the diagonal band
nTPM: 699.4
1812 Female, age 91, both hemispheres 942.9
2775 Male, age 80, right hemisphere 831.4
2029 Male, age 61, right hemisphere 753.7
2195 Female, age 85, both hemispheres 690.4
1979 Male, age 74, unknown 278.6
Putamen
nTPM: 199.0
1937 Female, age 91, right hemisphere 275.6
1838 Male, age 80, right hemisphere 253.9
2466 Female, age 79, unknown 235.6
1829 Male, age 74, unknown 196.6
2482 Female, age 94, left hemisphere 182.8
2647 Male, age 75, left hemisphere 151.1
2489 Female, age 72, unknown 97.9
Septal nuclei
nTPM: 540.7
2031 Female, age 72, unknown 876.2
2009 Female, age 91, both hemispheres 735.8
1960 Male, age 74, unknown 726.2
2629 Female, age 94, right hemisphere 706.5
2059 Female, age 85, both hemispheres 363.9
2394 Male, age 61, left hemisphere 212.3
2199 Male, age 80, right hemisphere 164.3
Stria terminalis, bed nucleus
nTPM: 619.2
1974 Female, age 91, both hemispheres 824.7
2486 Female, age 94, both hemispheres 702.2
2201 Male, age 74, unknown 330.7

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

230.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 167.6
Samples: 246

Max nTPM: 911.6
Min nTPM: 36.3
Std nTPM: 101.6
Median nTPM: 157.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 911.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 522.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 444.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 428.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 384.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 361.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 355.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 355.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 349.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 344.8
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 335.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 331.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 315.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 310.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 309.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 309.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 301.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 299.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 295.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 294.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 292.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 287.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 286.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 286.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 285.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 284.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 282.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 282.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 281.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 280.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 278.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 273.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 271.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 271.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 270.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 270.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 267.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 267.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 264.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 262.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 260.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 259.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 259.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 255.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 255.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 255.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 254.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 251.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 242.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 240.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 240.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 237.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 234.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 231.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 231.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 230.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 229.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 228.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 225.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 224.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 223.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 222.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 222.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 220.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 216.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 215.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 215.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 215.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 214.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 213.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 212.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 211.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 210.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 210.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 210.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 208.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 208.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 208.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 206.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 206.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 206.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 205.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 204.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 203.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 203.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 203.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 202.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 201.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 200.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 197.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 196.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 196.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 195.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 195.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 192.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 189.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 188.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 187.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 187.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 183.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 181.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 181.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 180.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 179.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 178.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 178.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 177.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 176.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 176.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 176.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 176.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 176.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 175.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 174.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 172.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 167.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 167.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 166.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 166.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 164.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 160.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 158.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 158.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 157.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 156.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 155.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 154.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 153.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 151.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 147.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 146.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 144.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 142.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 141.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 139.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 139.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 138.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 138.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 134.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 133.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 133.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 132.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 131.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 130.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 126.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 126.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 125.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 123.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 120.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 119.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 117.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 116.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 114.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 114.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 111.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 110.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 110.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 109.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 108.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 107.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 107.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 107.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 107.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 107.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 106.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 104.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 103.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 102.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 101.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 100.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 99.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 99.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 98.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 97.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 94.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 93.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 93.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 93.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 92.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 91.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 91.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 90.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 90.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 90.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 88.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 87.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 86.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 85.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 82.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 80.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 78.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 77.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 77.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 77.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 75.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 75.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 74.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 74.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 73.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 73.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 71.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 70.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 67.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 66.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 66.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 65.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 65.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 65.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 65.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 64.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 64.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 63.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 63.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 63.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 63.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 63.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 61.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 61.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 61.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 60.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 60.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 60.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 59.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 57.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 56.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 56.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 55.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 55.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 54.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 53.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 53.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 53.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 50.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 49.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 48.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 47.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 47.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 46.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 44.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 43.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 40.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 40.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 40.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 38.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 37.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 36.3
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 230.7
Samples: 246

Max nTPM: 488.0
Min nTPM: 10.0
Std nTPM: 114.9
Median nTPM: 248.8
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 488.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 445.2
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 437.1
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 436.6
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 435.9
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 434.9
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 423.0
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 411.7
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 411.0
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 409.2
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 408.8
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 404.9
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 404.5
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 404.3
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 402.5
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 397.4
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 394.6
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 394.1
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 392.5
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 392.1
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 381.7
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 377.5
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 376.2
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 375.2
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 374.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 373.6
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 373.3
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 370.4
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 370.4
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 366.9
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 363.5
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 361.8
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 355.8
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 354.3
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 350.6
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 350.5
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 350.0
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 348.6
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 348.6
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 347.8
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 344.4
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 339.1
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 338.8
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 334.4
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 333.8
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 333.6
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 332.8
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 332.3
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 331.2
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 330.9
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 329.8
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 329.2
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 328.8
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 328.7
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 328.3
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 327.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 324.9
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 323.8
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 323.8
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 323.2
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 322.4
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 321.7
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 320.9
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 320.1
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 319.7
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 317.3
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 316.6
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 316.1
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 315.6
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 315.3
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 315.1
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 312.9
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 308.0
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 304.7
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 302.9
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 301.2
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 299.9
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 299.4
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 299.2
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 298.0
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 297.3
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 296.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 296.3
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 293.9
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 291.6
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 291.0
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 290.3
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 288.6
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 287.3
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 287.2
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 286.5
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 285.6
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 284.8
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 282.8
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 282.1
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 281.3
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 281.3
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 280.9
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 280.9
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 280.0
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 279.8
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 278.5
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 276.9
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 276.6
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 276.3
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 271.8
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 271.3
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 270.8
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 270.3
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 270.1
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 269.5
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 265.4
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 262.8
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 262.3
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 260.4
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 258.6
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 256.8
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 256.6
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 256.2
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 256.1
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 253.2
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 250.5
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 249.6
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 248.1
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 245.9
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 245.3
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 244.1
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 244.0
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 244.0
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 243.5
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 240.9
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 240.3
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 239.7
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 236.4
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 234.0
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 232.3
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 232.1
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 230.2
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 229.2
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 227.2
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 226.7
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 225.8
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 225.1
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 223.9
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 223.9
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 223.0
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 216.3
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 215.8
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 214.4
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 214.0
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 213.9
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 212.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 210.7
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 205.8
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 202.2
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 200.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 195.2
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 190.9
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 190.1
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 185.1
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 184.5
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 181.6
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 180.9
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 176.7
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 172.8
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 170.8
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 167.4
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 163.0
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 162.5
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 162.5
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 159.9
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 149.6
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 147.5
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 147.1
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 146.2
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 142.6
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 136.3
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 135.5
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 135.1
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 133.7
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 132.3
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 129.4
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 126.4
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 123.5
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 121.6
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 119.9
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 119.8
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 118.7
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 117.0
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 112.3
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 110.9
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 108.0
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 107.3
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 106.3
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 105.7
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 105.4
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 103.9
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 103.5
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 102.4
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 100.4
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 99.4
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 98.1
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 96.4
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 93.5
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 85.9
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 83.3
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 78.9
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 78.4
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 77.7
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 77.4
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 76.5
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 76.1
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 74.8
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 70.0
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 68.5
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 66.5
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 65.6
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 64.6
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 64.5
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 64.0
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 63.9
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 62.2
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 61.5
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 60.8
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 59.7
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 58.5
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 57.9
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 57.5
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 56.2
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 54.5
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 51.2
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 49.5
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 48.3
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 47.9
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 46.7
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 40.0
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 39.9
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 39.8
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 39.7
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 38.4
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 34.0
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 29.5
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 29.1
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 25.4
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 24.0
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 10.0
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Brain - Putamen (basal ganglia)
Average nTPM: 140.2
Samples: 205

Max nTPM: 518.1
Min nTPM: 33.7
Std nTPM: 80.3
Median nTPM: 121.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 518.1
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 375.3
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 329.3
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 307.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 290.5
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 290.2
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 288.6
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 284.9
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 284.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 284.4
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 281.4
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 279.3
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 276.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 270.8
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 269.9
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 267.8
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 260.0
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 259.8
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 253.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 248.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 247.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 247.2
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 244.3
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 242.6
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 242.1
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 242.1
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 240.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 238.7
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 237.0
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 235.8
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 234.3
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 233.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 233.4
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 231.0
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 230.8
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 229.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 225.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 218.3
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 217.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 217.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 213.5
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 211.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 211.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 210.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 209.5
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 208.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 207.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 207.4
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 207.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 204.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 204.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 201.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 201.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 196.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 194.4
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 194.3
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 193.5
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 188.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 185.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 184.4
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 182.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 179.2
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 174.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 174.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 173.9
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 172.4
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 170.8
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 170.8
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 170.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 170.2
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 170.1
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 169.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 166.4
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 166.1
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 163.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 163.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 163.0
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 163.0
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 157.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 157.1
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 153.8
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 151.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 150.2
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 149.3
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 147.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 146.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 146.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 144.0
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 143.6
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 143.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 143.2
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 140.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 137.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 137.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 136.9
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 130.8
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 130.0
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 129.8
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 128.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 125.9
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 124.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 123.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 121.6
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 119.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 118.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 118.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 115.3
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 111.9
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 111.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 110.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 109.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 108.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 107.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 106.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 103.9
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 103.1
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 103.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 102.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 102.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 100.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 100.4
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 100.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 97.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 94.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 90.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 90.0
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 89.8
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 89.2
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 88.8
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 86.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 86.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 83.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 82.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 82.1
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 81.7
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 81.2
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 80.2
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 79.2
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 78.2
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 77.1
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 76.9
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 76.8
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 76.7
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 76.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 75.9
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 75.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 75.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 75.2
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 73.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 72.9
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 72.7
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 72.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 71.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 71.7
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 70.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 69.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 68.9
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 68.9
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 68.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 67.2
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 67.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 66.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 64.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 64.2
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 63.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 63.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 63.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 62.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 62.5
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 62.2
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 61.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 61.7
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 61.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 61.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 60.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 60.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 60.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 60.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 59.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 59.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 58.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 58.3
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 58.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 57.2
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 56.5
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 56.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 55.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 55.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 54.7
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 52.3
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 52.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 51.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 51.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 50.0
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 49.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 48.1
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 46.9
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 46.5
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 46.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 42.3
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 41.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 40.7
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 40.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 34.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 33.7
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

551.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 279.5
FF:10164-103B2 76 years, female 279.5
Nucleus accumbens
Scaled Tags Per Million: 551.7
FF:10037-101F1 23-56 years, mixed 551.7
Putamen
Scaled Tags Per Million: 340.6
FF:10176-103C5 60 years, female 340.6
Globus pallidus
Scaled Tags Per Million: 187.2
FF:10175-103C4 60 years, female 261.3
FF:10161-103A8 76 years, female 113.2

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

468.7
Pig sample Sample description nTPM
Caudate
nTPM: 443.3
Samples: 4

Max nTPM: 514.9
Min nTPM: 373.8
Sample A Female 455.1
Sample B Female 429.3
Sample C Male 514.9
Sample D Male 373.8
Putamen
nTPM: 418.4
Samples: 4

Max nTPM: 526.8
Min nTPM: 339.6
Sample A Female 339.6
Sample B Female 386.3
Sample C Male 526.8
Sample D Male 420.9
Septum
nTPM: 468.7
Samples: 4

Max nTPM: 559.8
Min nTPM: 344.2
Sample A Female 559.8
Sample B Female 438.5
Sample C Male 532.4
Sample D Male 344.2
Ventral pallidum
nTPM: 466.0
Samples: 4

Max nTPM: 530.8
Min nTPM: 365.7
Sample A Female 501.6
Sample B Female 465.8
Sample C Male 530.8
Sample D Male 365.7

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

879.8
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 576.8
Samples: 4

Max nTPM: 672.5
Min nTPM: 474.9
Sample A Male 511.9
Sample B Male 474.9
Sample C Female 672.5
Sample D Female 647.9
Septum
nTPM: 834.5
Samples: 4

Max nTPM: 919.4
Min nTPM: 719.0
Sample A Male 919.4
Sample B Male 811.9
Sample C Female 887.5
Sample D Female 719.0
Ventral forebrain
nTPM: 879.8
Samples: 4

Max nTPM: 949.6
Min nTPM: 816.2
Sample A Male 816.2
Sample B Male 862.6
Sample C Female 949.6
Sample D Female 890.7

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

11.3
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 8.4
1128 Antisense, RP_Baylor_103128, Mouse strain C57BL/6J (56 days, male) 8.4
1127 Antisense, RP_Baylor_103128, Mouse strain C57BL/6J (56 days, male) 7.7
Pallidum
Expression energy: 11.3
1127 Antisense, RP_Baylor_103128, Mouse strain C57BL/6J (56 days, male) 11.3
1128 Antisense, RP_Baylor_103128, Mouse strain C57BL/6J (56 days, male) 10.3

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