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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:125.2 nTPM
HPA Brain:83.6 nTPM
GTEx:125.2 nTPM
FANTOM5:237.3 Scaled Tags Per Million
Pig:131.0 nTPM
Mouse:136.8 nTPM
Allen mouse:11.1 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA043175Antibody HPA054868
Glial cells LowNot detected
Neuronal cells HighHigh





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

83.6
Sample id Sample description nTPM
Caudate nucleus
nTPM: 68.6
2481 Female, age 94, left hemisphere 93.8
2288 Male, age 75, left hemisphere 78.9
2846 Female, age 79, unknown 74.3
1857 Female, age 85, left hemisphere 70.9
2290 Female, age 72, unknown 68.0
1854 Male, age 80, left hemisphere 67.6
1781 Male, age 74, unknown 56.8
2289 Male, age 61, right hemisphere 38.1
Globus pallidus, externus
nTPM: 47.1
2772 Female, age 79, unknown 78.0
2395 Male, age 75, both hemispheres 56.7
1996 Male, age 80, right hemisphere 46.9
2646 Male, age 61, right hemisphere 33.7
2567 Female, age 72, unknown 20.0
Globus pallidus, internus
nTPM: 51.2
2483 Female, age 94, right hemisphere 82.1
2287 Male, age 75, right hemisphere 75.2
1818 Male, age 74, unknown 54.3
2778 Female, age 91, both hemispheres 49.9
2037 Male, age 80, right hemisphere 44.6
2111 Female, age 85, right hemisphere 27.7
2566 Female, age 72, unknown 24.4
Nucleus accumbens
nTPM: 69.5
1856 Female, age 91, right hemisphere 96.9
2286 Male, age 75, left hemisphere 81.2
2698 Female, age 72, unknown 78.6
2391 Female, age 94, left hemisphere 72.2
2824 Male, age 61, right hemisphere 68.9
1783 Male, age 74, unknown 61.2
1806 Female, age 85, left hemisphere 58.3
2732 Male, age 80, right hemisphere 38.7
Nucleus basalis of Meynert
nTPM: 51.1
2393 Male, age 80, right hemisphere 61.2
2484 Female, age 94, left hemisphere 54.8
2821 Male, age 75, both hemispheres 53.9
2569 Male, age 61, both hemispheres 34.6
Nucleus of the diagonal band
nTPM: 83.6
2775 Male, age 80, right hemisphere 102.6
1812 Female, age 91, both hemispheres 94.3
2195 Female, age 85, both hemispheres 81.5
2029 Male, age 61, right hemisphere 78.1
1979 Male, age 74, unknown 61.4
Putamen
nTPM: 60.1
1937 Female, age 91, right hemisphere 76.7
2466 Female, age 79, unknown 74.5
2482 Female, age 94, left hemisphere 73.3
1838 Male, age 80, right hemisphere 62.9
1829 Male, age 74, unknown 59.5
2647 Male, age 75, left hemisphere 41.2
2489 Female, age 72, unknown 32.6
Septal nuclei
nTPM: 68.0
2031 Female, age 72, unknown 102.8
1960 Male, age 74, unknown 84.1
2009 Female, age 91, both hemispheres 77.3
2629 Female, age 94, right hemisphere 68.2
2199 Male, age 80, right hemisphere 56.9
2394 Male, age 61, left hemisphere 45.6
2059 Female, age 85, both hemispheres 41.2
Stria terminalis, bed nucleus
nTPM: 73.3
1974 Female, age 91, both hemispheres 93.2
2486 Female, age 94, both hemispheres 64.6
2201 Male, age 74, unknown 62.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

125.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 111.7
Samples: 246

Max nTPM: 353.1
Min nTPM: 54.0
Std nTPM: 36.8
Median nTPM: 107.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 353.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 282.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 267.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 241.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 216.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 214.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 206.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 205.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 196.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 181.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 176.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 174.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 171.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 168.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 167.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 163.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 162.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 159.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 156.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 155.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 154.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 152.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 152.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 152.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 150.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 150.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 147.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 146.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 144.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 143.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 143.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 142.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 142.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 142.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 141.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 139.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 138.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 137.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 137.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 136.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 136.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 136.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 135.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 134.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 134.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 134.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 133.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 129.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 129.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 129.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 129.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 129.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 128.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 128.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 126.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 126.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 126.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 126.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 125.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 125.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 125.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 125.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 125.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 124.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 124.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 123.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 120.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 120.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 119.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 119.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 119.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 119.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 119.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 118.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 118.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 118.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 118.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 118.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 117.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 117.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 116.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 116.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 116.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 115.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 115.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 115.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 115.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 115.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 115.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 115.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 115.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 115.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 114.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 114.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 114.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 114.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 114.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 113.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 113.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 113.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 113.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 113.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 112.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 112.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 111.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 111.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 111.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 111.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 111.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 111.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 110.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 110.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 110.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 110.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 109.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 108.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 108.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 107.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 107.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 107.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 107.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 107.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 107.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 107.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 107.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 106.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 106.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 106.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 106.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 105.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 105.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 104.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 104.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 104.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 102.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 102.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 102.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 101.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 100.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 100.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 100.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 99.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 99.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 99.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 98.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 98.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 98.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 97.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 97.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 97.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 97.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 97.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 97.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 96.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 96.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 95.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 95.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 95.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 95.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 95.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 95.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 95.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 94.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 94.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 93.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 93.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 93.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 92.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 92.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 92.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 92.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 91.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 91.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 91.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 91.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 90.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 90.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 90.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 90.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 90.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 89.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 89.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 89.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 88.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 88.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 88.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 88.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 87.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 87.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 87.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 87.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 87.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 86.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 86.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 86.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 86.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 85.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 84.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 84.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 84.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 84.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 84.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 83.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 83.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 82.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 81.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 81.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 81.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 80.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 80.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 79.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 79.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 79.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 78.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 78.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 78.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 78.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 77.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 77.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 77.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 77.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 77.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 76.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 76.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 76.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 75.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 75.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 74.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 74.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 74.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 73.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 73.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 71.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 70.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 69.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 67.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 67.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 65.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 64.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 63.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 62.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 61.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 57.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 55.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 55.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 54.0
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 125.2
Samples: 246

Max nTPM: 340.8
Min nTPM: 41.1
Std nTPM: 32.4
Median nTPM: 121.4
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 340.8
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 247.4
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 236.7
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 229.6
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 210.3
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 202.2
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 199.0
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 190.1
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 186.8
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 186.5
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 186.5
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 183.4
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 177.4
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 172.7
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 172.6
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 171.5
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 171.3
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 169.2
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 168.6
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 168.1
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 165.9
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 165.8
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 165.3
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 165.0
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 164.8
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 163.9
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 162.4
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 162.0
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 162.0
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 159.4
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 158.8
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 157.5
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 156.5
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 153.8
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 151.5
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 151.4
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 150.8
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 150.7
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 149.8
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 148.7
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 147.9
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 147.6
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 147.1
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 146.9
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 146.7
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 146.6
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 146.2
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 146.0
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 145.8
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 143.8
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 143.8
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 142.4
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 141.5
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 141.3
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 141.1
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 140.5
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 139.8
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 139.7
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 139.0
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 138.9
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 138.6
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 137.6
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 137.5
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 137.5
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 137.4
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 136.7
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 136.5
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 136.0
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 135.7
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 135.3
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 134.5
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 134.2
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 134.0
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 133.5
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 133.2
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 132.8
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 132.8
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 132.3
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 132.0
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 132.0
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 131.4
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 131.1
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 130.9
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 130.9
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 130.9
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 130.3
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 130.2
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 129.9
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 129.2
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 129.2
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 128.9
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 128.2
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 128.2
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 128.0
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 127.9
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 127.8
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 127.0
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 126.8
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 126.5
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 126.1
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 125.9
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 125.9
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 125.8
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 125.7
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 125.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 125.4
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 125.4
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 125.3
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 125.2
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 125.1
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 124.7
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 124.5
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 124.4
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 124.2
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 123.9
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 123.7
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 123.5
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 123.2
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 123.1
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 122.9
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 122.1
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 121.8
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 121.4
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 121.3
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 121.3
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 120.9
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 120.3
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 120.0
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 119.4
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 119.4
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 119.1
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 118.7
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 118.4
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 118.2
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 118.0
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 117.8
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 117.8
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 117.5
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 117.3
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 117.3
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 117.1
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 117.0
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 116.4
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 116.2
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 115.2
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 115.0
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 114.9
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 114.8
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 114.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 114.6
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 114.1
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 113.8
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 113.8
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 113.6
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 113.6
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 113.5
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 113.3
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 113.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 113.1
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 112.5
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 112.3
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 112.2
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 111.7
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 111.5
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 111.4
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 111.0
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 110.8
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 110.4
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 110.2
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 110.0
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 110.0
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 109.8
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 109.7
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 109.4
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 109.1
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 108.9
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 108.7
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 108.5
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 108.5
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 108.1
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 107.9
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 107.6
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 107.1
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 107.0
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 106.8
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 106.7
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 105.4
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 104.9
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 104.9
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 104.9
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 104.7
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 104.7
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 104.6
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 104.2
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 104.0
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 103.7
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 103.7
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 103.6
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 103.4
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 103.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 102.6
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 101.6
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 101.4
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 101.3
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 99.0
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 98.7
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 98.7
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 98.7
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 98.5
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 98.3
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 98.1
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 97.5
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 97.1
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 97.0
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 94.8
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 94.4
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 94.1
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 93.4
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 92.8
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 92.7
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 92.5
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 92.2
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 92.0
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 91.9
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 90.0
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 88.5
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 86.8
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 86.5
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 85.5
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 84.8
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 84.1
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 82.6
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 82.0
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 81.7
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 80.9
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 79.9
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 79.9
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 79.7
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 79.0
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 78.2
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 75.1
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 74.4
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 72.9
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 71.2
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 51.0
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 41.1
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Brain - Putamen (basal ganglia)
Average nTPM: 112.1
Samples: 205

Max nTPM: 225.7
Min nTPM: 49.8
Std nTPM: 29.2
Median nTPM: 109.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 225.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 195.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 195.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 194.2
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 192.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 191.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 188.2
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 177.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 173.6
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 166.5
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 166.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 154.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 154.0
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 153.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 153.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 152.4
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 151.5
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 150.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 147.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 147.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 146.4
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 146.2
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 146.2
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 145.8
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 144.6
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 144.0
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 141.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 140.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 140.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 138.6
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 137.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 136.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 135.8
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 135.8
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 135.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 135.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 135.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 134.9
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 134.7
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 134.4
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 134.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 133.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 133.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 132.9
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 132.6
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 132.2
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 131.8
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 131.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 131.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 129.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 128.4
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 128.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 128.1
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 128.0
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 127.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 127.3
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 125.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 125.5
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 125.1
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 123.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 122.3
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 122.1
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 121.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 120.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 120.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 120.1
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 119.7
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 118.6
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 118.2
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 118.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 117.7
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 117.6
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 117.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 117.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 117.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 116.8
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 116.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 116.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 116.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 116.6
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 116.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 116.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 115.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 115.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 115.7
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 115.1
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 114.7
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 114.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 113.8
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 113.5
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 113.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 112.7
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 112.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 111.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 111.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 111.2
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 110.6
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 110.6
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 110.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 110.4
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 110.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 110.1
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 109.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 109.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 109.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 108.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 108.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 108.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 108.1
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 108.0
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 107.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 107.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 107.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 106.9
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 106.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 106.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 106.6
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 106.4
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 106.0
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 105.4
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 105.1
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 104.7
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 104.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 103.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 103.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 103.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 103.3
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 102.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 102.7
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 102.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 102.1
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 101.5
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 101.5
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 101.5
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 101.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 100.7
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 100.5
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 98.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 98.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 97.6
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 97.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 97.0
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 96.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 96.6
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 96.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 96.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 96.0
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 95.8
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 95.8
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 95.3
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 95.1
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 95.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 94.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 94.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 94.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 94.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 93.5
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 93.0
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 93.0
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 92.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 92.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 92.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 91.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 91.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 91.3
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 90.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 89.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 89.3
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 88.5
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 87.6
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 86.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 86.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 85.5
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 84.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 83.9
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 83.2
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 82.7
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 81.5
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 80.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 80.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 78.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 77.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 77.3
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 77.2
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 76.9
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 76.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 75.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 74.2
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 74.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 73.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 71.9
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 67.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 65.3
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 65.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 64.3
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 63.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 63.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 62.9
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 61.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 60.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 59.1
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 57.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 57.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 53.8
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 49.8
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

237.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 126.9
FF:10164-103B2 76 years, female 126.9
Nucleus accumbens
Scaled Tags Per Million: 156.9
FF:10037-101F1 23-56 years, mixed 156.9
Putamen
Scaled Tags Per Million: 237.3
FF:10176-103C5 60 years, female 237.3
Globus pallidus
Scaled Tags Per Million: 143.3
FF:10175-103C4 60 years, female 213.4
FF:10161-103A8 76 years, female 73.2

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

131.0
Pig sample Sample description nTPM
Caudate
nTPM: 105.0
Samples: 4

Max nTPM: 119.9
Min nTPM: 86.8
Sample A Female 95.4
Sample B Female 86.8
Sample C Male 117.7
Sample D Male 119.9
Putamen
nTPM: 131.0
Samples: 4

Max nTPM: 204.8
Min nTPM: 76.8
Sample A Female 76.8
Sample B Female 117.9
Sample C Male 204.8
Sample D Male 124.6
Septum
nTPM: 112.5
Samples: 4

Max nTPM: 141.6
Min nTPM: 90.6
Sample A Female 90.6
Sample B Female 101.7
Sample C Male 141.6
Sample D Male 116.0
Ventral pallidum
nTPM: 107.0
Samples: 4

Max nTPM: 128.4
Min nTPM: 87.2
Sample A Female 107.5
Sample B Female 105.0
Sample C Male 128.4
Sample D Male 87.2

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

136.8
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 114.5
Samples: 4

Max nTPM: 121.1
Min nTPM: 109.7
Sample A Male 112.4
Sample B Male 109.7
Sample C Female 114.8
Sample D Female 121.1
Septum
nTPM: 136.8
Samples: 4

Max nTPM: 163.7
Min nTPM: 108.7
Sample A Male 108.7
Sample B Male 163.7
Sample C Female 143.3
Sample D Female 131.6
Ventral forebrain
nTPM: 117.3
Samples: 4

Max nTPM: 137.7
Min nTPM: 100.2
Sample A Male 115.1
Sample B Male 116.0
Sample C Female 137.7
Sample D Female 100.2

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

11.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 10.5
68522460 Antisense, RP_050118_02_A12, Mouse strain C57BL/6J (56 days, male) 10.5
Pallidum
Expression energy: 11.1
68522460 Antisense, RP_050118_02_A12, Mouse strain C57BL/6J (56 days, male) 11.1

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