HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:40.7 nTPM
HPA Brain:56.2 nTPM
GTEx:40.7 nTPM
FANTOM5:131.8 Scaled Tags Per Million
Pig:33.5 nTPM
Mouse:149.7 nTPM
Allen mouse:7.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA037646Antibody HPA043891Antibody CAB033765Antibody CAB079995
Glial cells LowLowLowNot detected
Neuronal cells MediumMediumLowNot detected








HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 56.2
Sample id Sample description nTPM
Hippocampus
nTPM: 43.2
1898 Male, age 80, left hemisphere 57.0
1855 Male, age 76, left hemisphere 47.0
2621 Female, age 67, right hemisphere 43.7
2148 Female, age 91, left hemisphere 37.5
1911 Female, age 85, right hemisphere 37.2
2529 Female, age 94, left hemisphere 36.6
Dentate gyrus
nTPM: 43.7
1927 Female, age 91, both hemispheres 54.6
2010 Male, age 76, both hemispheres 50.8
2246 Female, age 85, both hemispheres 44.1
2528 Male, age 74, both hemispheres 40.6
2530 Female, age 94, left hemisphere 38.1
2531 Female, age 67, both hemispheres 33.9
Entorhinal gyrus
nTPM: 42.5
1938 Female, age 85, left hemisphere 53.6
2764 Male, age 80, right hemisphere 47.6
1787 Male, age 76, left hemisphere 45.5
2613 Female, age 94, left hemisphere 38.5
2117 Female, age 91, right hemisphere 36.4
2686 Male, age 75, right hemisphere 33.3
Hippocampus, CA1
nTPM: 50.5
2749 Male, age 80, left hemisphere 69.2
1873 Female, age 85, both hemispheres 51.9
2045 Male, age 76, both hemispheres 48.9
2527 Male, age 74, both hemispheres 44.0
2082 Female, age 91, right hemisphere 38.7
Hippocampus, CA2
nTPM: 49.7
1892 Male, age 76, both hemispheres 64.2
1963 Male, age 80, left hemisphere 54.5
2249 Male, age 74, both hemispheres 50.3
1940 Female, age 85, left hemisphere 45.9
2437 Female, age 94, left hemisphere 44.5
2113 Female, age 91, right hemisphere 38.5
Hippocampus, CA3
nTPM: 48.5
2436 Male, age 74, both hemispheres 60.8
2137 Male, age 80, left hemisphere 57.5
1867 Male, age 76, both hemispheres 57.4
1891 Female, age 85, both hemispheres 41.5
2620 Female, age 94, left hemisphere 40.3
2861 Female, age 67, both hemispheres 33.2
Parahippocampal cortex
nTPM: 43.2
1850 Male, age 80, both hemispheres 58.0
1933 Female, age 85, both hemispheres 50.7
1990 Female, age 91, right hemisphere 49.8
2018 Male, age 76, both hemispheres 45.5
2250 Female, age 67, right hemisphere 45.2
2532 Female, age 72, left hemisphere 42.4
2245 Female, age 91, both hemispheres 40.1
2693 Female, age 94, both hemispheres 39.8
2692 Male, age 74, both hemispheres 30.7
2622 Female, age 67, right hemisphere 29.5
Perirhinal gyrus
nTPM: 56.2
1847 Female, age 91, left hemisphere 65.5
1794 Male, age 80, right hemisphere 63.2
1841 Female, age 85, right hemisphere 59.6
2521 Female, age 94, right hemisphere 50.8
2848 Male, age 76, right hemisphere 42.0
Subiculum
nTPM: 42.2
1977 Female, age 85, both hemispheres 50.8
1901 Male, age 80, both hemispheres 48.7
2042 Male, age 76, both hemispheres 40.6
2438 Female, age 94, left hemisphere 39.0
2619 Male, age 74, both hemispheres 37.1
2729 Female, age 91, right hemisphere 36.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 40.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 40.7
Samples: 197

Max nTPM: 84.1
Min nTPM: 17.7
Std nTPM: 12.0
Median nTPM: 37.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 84.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 74.5
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 66.9
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 65.1
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 63.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 63.5
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 63.5
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 63.2
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 62.9
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 62.6
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 62.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 131.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 131.8
FF:10169-103B7 60 years, female 164.0
FF:10153-102I9 76 years, female 99.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 33.5
Pig sample Sample description nTPM
Subiculum
nTPM: 28.3
Samples: 4

Max nTPM: 36.8
Min nTPM: 23.0
Sample A Female 36.8
Sample B Female 25.2
Sample C Male 23.0
Sample D Male 28.2
Dorsal hippocampus
nTPM: 33.5
Samples: 4

Max nTPM: 42.8
Min nTPM: 28.1
Sample A Female 42.8
Sample B Female 33.0
Sample C Male 30.1
Sample D Male 28.1
Entorhinal cortex
nTPM: 29.3
Samples: 4

Max nTPM: 35.2
Min nTPM: 22.7
Sample A Female 31.0
Sample B Female 35.2
Sample C Male 28.3
Sample D Male 22.7
Ventral hippocampus
nTPM: 29.2
Samples: 4

Max nTPM: 35.0
Min nTPM: 23.5
Sample A Female 35.0
Sample B Female 23.5
Sample C Male 28.6
Sample D Male 29.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 149.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 131.6
Samples: 4

Max nTPM: 143.5
Min nTPM: 114.9
Sample A Male 128.6
Sample B Male 139.4
Sample C Female 143.5
Sample D Female 114.9
Hippocampal formation
nTPM: 149.8
Samples: 4

Max nTPM: 181.2
Min nTPM: 131.9
Sample A Male 181.2
Sample B Male 139.7
Sample C Female 131.9
Sample D Female 146.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 7.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.7
413778 Antisense, RP_040809_01_C10, Mouse strain C57BL/6J (56 days, male) 7.7

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