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TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:16.8 nTPM
HPA Brain:37.4 nTPM
GTEx:16.8 nTPM
Pig:26.2 nTPM

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

37.4
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 32.1
2226 Male, age 75, left hemisphere 42.4
1961 Female, age 42, unknown 21.8
Dorsomedial nucleus
nTPM: 28.4
1989 Male, age 62, unknown 30.5
2041 Female, age 72, unknown 29.6
2017 Female, age 42, unknown 25.1
Lateral hypothalamic area
nTPM: 37.4
2271 Male, age 75, both hemispheres 44.8
1791 Male, age 80, right hemisphere 36.4
2228 Male, age 66, unknown 35.9
2412 Male, age 62, unknown 32.5
Mammillary body
nTPM: 33.5
1923 Female, age 72, unknown 37.1
1948 Female, age 72, unknown 35.2
2413 Male, age 66, unknown 34.4
1945 Male, age 80, right hemisphere 32.1
1834 Female, age 42, unknown 28.7
Paraventricular nucleus
nTPM: 25.4
2700 Male, age 62, unknown 25.4
Preoptic area
nTPM: 30.4
1907 Male, age 80, right hemisphere 35.9
2414 Female, age 72, unknown 28.5
1861 Female, age 42, unknown 26.7
Supraoptic nucleus
nTPM: 35.4
2043 Male, age 62, unknown 36.6
1894 Female, age 72, unknown 35.3
2835 Female, age 72, unknown 34.2
Ventromedial nucleus
nTPM: 27.0
1982 Female, age 72, unknown 28.9
1822 Female, age 42, unknown 25.0

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

16.8
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 16.8
Samples: 202

Max nTPM: 58.0
Min nTPM: 9.8
Std nTPM: 4.5
Median nTPM: 16.1
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 58.0
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 33.8
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 31.0
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 27.0
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 26.9
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 26.3
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 25.4
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 24.5
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 24.2
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 24.1
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 22.8
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 22.8
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 22.6
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 22.6
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 21.3
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 21.3
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 21.2
GTEX-183WM-0011-R8a-SM-7189W 70-79 years, female 20.9
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 20.8
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 20.4
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 20.4
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 20.3
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 20.2
GTEX-OHPN-0011-R8A-SM-33HBT 60-69 years, female 20.0
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 19.8
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 19.8
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 19.7
GTEX-14LLW-0011-R8a-SM-62LFG 70-79 years, female 19.6
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 19.6
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 19.6
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 19.5
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 19.4
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 19.4
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 19.4
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 19.3
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 19.3
GTEX-S7SE-0011-R8A-SM-2XCDG 50-59 years, male 19.1
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 19.1
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 19.1
GTEX-XLM4-0011-R8A-SM-4AT44 60-69 years, male 19.1
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 19.1
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 18.8
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 18.7
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 18.5
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 18.4
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 18.4
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 18.2
GTEX-X4EP-0011-R8B-SM-4QASL 60-69 years, female 18.2
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 18.2
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 18.2
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 18.1
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 18.0
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 18.0
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 18.0
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 17.9
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 17.9
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 17.8
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 17.7
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 17.7
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 17.7
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 17.6
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 17.6
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 17.6
GTEX-NPJ7-0011-R8a-SM-2I3G2 60-69 years, female 17.5
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 17.4
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 17.4
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 17.3
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 17.3
GTEX-145MI-0011-R8b-SM-5PNZ9 60-69 years, female 17.2
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 17.2
GTEX-R55E-0011-R8A-SM-2TC66 20-29 years, male 17.2
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 17.2
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 17.2
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 17.1
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 17.1
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 17.1
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 17.1
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 17.0
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 17.0
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 16.9
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 16.9
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 16.8
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 16.8
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 16.7
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 16.7
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 16.7
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 16.6
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 16.6
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 16.6
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 16.5
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 16.5
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 16.4
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 16.4
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 16.4
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 16.3
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 16.3
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 16.2
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 16.1
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 16.1
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 16.1
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 16.1
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 16.0
GTEX-QDT8-0011-R8A-SM-32PKE 30-39 years, female 16.0
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 16.0
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 16.0
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 15.9
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 15.9
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 15.9
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 15.9
GTEX-13IVO-0011-R8a-SM-5L3DY 70-79 years, male 15.8
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 15.7
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 15.7
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 15.7
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 15.7
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 15.6
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 15.6
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 15.6
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 15.5
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 15.4
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 15.4
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 15.4
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 15.3
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 15.3
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 15.3
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 15.3
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 15.3
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 15.2
GTEX-RU72-0011-R8A-SM-2TF61 50-59 years, female 15.2
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 15.2
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 15.0
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 15.0
GTEX-N7MT-0011-R8a-SM-2I5GU 60-69 years, female 15.0
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 15.0
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 14.9
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 14.9
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 14.9
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 14.9
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 14.9
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 14.9
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 14.8
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 14.8
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 14.8
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 14.8
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 14.7
GTEX-TSE9-0011-R8A-SM-3DB7R 60-69 years, female 14.7
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 14.7
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 14.6
GTEX-18464-0011-R8a-SM-72D4Z 50-59 years, male 14.6
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 14.6
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 14.5
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 14.5
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 14.4
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 14.3
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 14.3
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 14.3
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 14.2
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 14.2
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 14.1
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 14.1
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 14.0
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 14.0
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 13.9
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 13.9
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 13.9
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 13.8
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 13.7
GTEX-Q2AG-0011-R8A-SM-2HMK5 40-49 years, female 13.7
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 13.7
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 13.6
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 13.6
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 13.5
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 13.4
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 13.4
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 13.3
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 13.3
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 13.2
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 13.2
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 13.1
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 13.0
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 13.0
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 12.9
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 12.8
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 12.6
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 12.5
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 12.4
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 12.4
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 12.3
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 12.2
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 12.2
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 12.1
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 12.1
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 12.1
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 12.0
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 11.9
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 11.5
GTEX-NL3H-0011-R8a-SM-DIPDY 60-69 years, male 11.5
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 11.5
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 11.2
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 11.1
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 10.9
GTEX-1H3VE-0011-R8b-SM-A9G1L 40-49 years, male 9.9
GTEX-13NZ8-0011-R8b-SM-5KM48 60-69 years, female 9.8
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

26.2
Pig sample Sample description nTPM
Hypothalamus
nTPM: 26.2
Samples: 4

Max nTPM: 30.5
Min nTPM: 24.3
Sample A Female 30.5
Sample B Female 24.3
Sample C Male 25.3
Sample D Male 24.5

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