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MPDU1
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  • MPDU1
TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:23.4 nTPM
HPA Brain:21.1 nTPM
GTEx:23.4 nTPM
FANTOM5:41.1 Scaled Tags Per Million
Pig:22.4 nTPM
Mouse:70.1 nTPM
Allen mouse:2.9 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA014845
Glial cells Medium
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

21.1
Sample id Sample description nTPM
Caudate nucleus
nTPM: 16.5
2481 Female, age 94, left hemisphere 20.4
2846 Female, age 79, unknown 18.9
1854 Male, age 80, left hemisphere 17.7
2290 Female, age 72, unknown 16.8
1781 Male, age 74, unknown 15.7
2288 Male, age 75, left hemisphere 14.8
1857 Female, age 85, left hemisphere 14.1
2289 Male, age 61, right hemisphere 14.0
Globus pallidus, externus
nTPM: 21.1
2772 Female, age 79, unknown 24.6
2395 Male, age 75, both hemispheres 21.4
1996 Male, age 80, right hemisphere 20.4
2567 Female, age 72, unknown 20.1
2646 Male, age 61, right hemisphere 18.7
Globus pallidus, internus
nTPM: 21.1
1818 Male, age 74, unknown 23.0
2778 Female, age 91, both hemispheres 22.7
2287 Male, age 75, right hemisphere 22.6
2037 Male, age 80, right hemisphere 21.5
2111 Female, age 85, right hemisphere 21.0
2483 Female, age 94, right hemisphere 20.5
2566 Female, age 72, unknown 16.6
Nucleus accumbens
nTPM: 16.1
2286 Male, age 75, left hemisphere 19.4
1806 Female, age 85, left hemisphere 17.1
1856 Female, age 91, right hemisphere 17.0
1783 Male, age 74, unknown 16.6
2698 Female, age 72, unknown 16.1
2391 Female, age 94, left hemisphere 14.5
2732 Male, age 80, right hemisphere 14.3
2824 Male, age 61, right hemisphere 13.7
Nucleus basalis of Meynert
nTPM: 17.0
2569 Male, age 61, both hemispheres 21.2
2393 Male, age 80, right hemisphere 16.5
2821 Male, age 75, both hemispheres 15.8
2484 Female, age 94, left hemisphere 14.5
Nucleus of the diagonal band
nTPM: 13.9
1812 Female, age 91, both hemispheres 17.5
2775 Male, age 80, right hemisphere 15.2
2029 Male, age 61, right hemisphere 12.6
2195 Female, age 85, both hemispheres 12.4
1979 Male, age 74, unknown 11.6
Putamen
nTPM: 15.9
1937 Female, age 91, right hemisphere 16.8
1838 Male, age 80, right hemisphere 16.3
2466 Female, age 79, unknown 16.2
2482 Female, age 94, left hemisphere 16.0
2647 Male, age 75, left hemisphere 15.7
1829 Male, age 74, unknown 15.6
2489 Female, age 72, unknown 14.9
Septal nuclei
nTPM: 14.3
2394 Male, age 61, left hemisphere 17.9
2199 Male, age 80, right hemisphere 14.8
1960 Male, age 74, unknown 14.3
2059 Female, age 85, both hemispheres 14.3
2009 Female, age 91, both hemispheres 13.5
2031 Female, age 72, unknown 12.8
2629 Female, age 94, right hemisphere 12.4
Stria terminalis, bed nucleus
nTPM: 12.1
1974 Female, age 91, both hemispheres 12.6
2486 Female, age 94, both hemispheres 11.8
2201 Male, age 74, unknown 11.7

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

23.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 21.1
Samples: 246

Max nTPM: 36.6
Min nTPM: 10.5
Std nTPM: 4.7
Median nTPM: 20.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 36.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 35.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 34.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 34.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 33.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 33.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 33.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 33.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 32.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 32.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 32.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 32.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 29.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 29.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 29.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 28.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 28.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 28.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 28.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 28.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 27.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 27.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 27.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 27.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 27.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 27.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 27.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 27.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 27.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 26.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 26.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 26.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 26.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 26.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 25.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 25.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 25.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 25.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 25.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 25.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 25.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 25.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 25.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 25.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 24.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 24.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 24.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 24.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 24.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 24.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 24.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 24.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 24.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 24.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 24.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 24.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 24.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 23.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 23.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 23.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 23.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 23.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 23.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 23.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 23.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 23.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 23.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 23.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 23.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 23.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 23.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 23.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 23.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 23.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 23.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 22.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 22.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 22.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 22.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 22.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 22.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 22.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 22.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 22.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 22.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 22.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 22.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 22.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 22.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 22.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 21.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 21.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 21.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 21.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 21.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 21.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 21.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 21.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 21.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 21.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 21.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 21.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 21.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 21.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 21.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 21.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 21.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 21.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 21.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 21.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 21.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 21.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 20.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 20.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 20.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 20.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 20.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 20.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 20.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 20.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 20.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 20.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 20.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 20.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 20.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 20.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 20.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 20.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 20.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 20.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 20.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 20.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 20.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 20.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 20.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 20.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 20.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 20.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 19.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 19.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 19.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 19.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 19.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 19.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 19.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 19.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 19.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 19.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 19.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 19.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 19.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 19.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 19.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 19.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 18.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 18.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 18.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 18.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 18.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 18.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 18.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 18.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 18.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 18.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 18.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 18.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 18.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 18.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 18.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 18.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 18.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 18.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 18.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 18.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 18.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 18.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 18.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 17.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 17.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 17.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 17.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 17.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 17.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 17.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 17.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 17.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 17.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 17.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 17.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 17.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 17.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 17.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 17.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 17.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 17.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 17.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 17.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 17.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 17.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 17.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 17.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 17.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 16.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 16.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 16.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 16.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 16.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 16.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 16.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 16.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 16.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 16.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 16.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 16.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 16.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 16.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 16.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 16.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 16.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 16.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 16.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 16.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 16.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 15.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 15.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 15.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 15.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 15.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 15.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 15.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 15.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 15.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 15.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 15.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 15.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 14.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 14.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 14.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 14.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 14.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 14.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 13.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 13.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 12.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 10.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 10.5
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 19.7
Samples: 246

Max nTPM: 38.4
Min nTPM: 9.1
Std nTPM: 4.6
Median nTPM: 18.9
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 38.4
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 36.3
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 33.4
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 32.4
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 32.0
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 31.5
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 31.4
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 31.4
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 30.3
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 29.5
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 29.2
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 28.8
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 28.5
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 28.2
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 27.9
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 27.6
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 27.6
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 27.4
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 27.2
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 26.7
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 26.5
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 26.5
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 26.5
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 26.3
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 26.3
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 25.7
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 25.7
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 25.4
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 24.9
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 24.9
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 24.7
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 24.7
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 24.6
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 24.5
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 24.4
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 24.4
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 24.4
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 24.4
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 24.3
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 24.2
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 24.2
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 24.1
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 24.0
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 23.8
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 23.7
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 23.7
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 23.6
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 23.6
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 23.5
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 23.5
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 23.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 23.3
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 23.2
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 23.2
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 22.9
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 22.4
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 22.3
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 22.2
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 22.2
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 22.2
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 22.2
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 22.0
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 22.0
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 22.0
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 22.0
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 22.0
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 21.9
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 21.8
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 21.7
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 21.7
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 21.6
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 21.5
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 21.5
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 21.4
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 21.4
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 21.3
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 21.2
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 21.0
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 20.9
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 20.9
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 20.8
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 20.8
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 20.8
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 20.7
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 20.7
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 20.5
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 20.4
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 20.4
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 20.2
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 20.2
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 20.2
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 20.2
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 20.2
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 20.1
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 20.1
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 20.1
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 20.1
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 20.0
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 20.0
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 19.9
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 19.9
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 19.8
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 19.8
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 19.8
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 19.6
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 19.6
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 19.6
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 19.5
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 19.5
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 19.5
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 19.3
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 19.3
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 19.3
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 19.3
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 19.2
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 19.1
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 19.0
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 19.0
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 18.9
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 18.9
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 18.9
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 18.9
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 18.9
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 18.9
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 18.8
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 18.8
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 18.8
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 18.8
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 18.7
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 18.7
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 18.5
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 18.5
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 18.5
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 18.5
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 18.4
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 18.4
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 18.4
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 18.4
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 18.4
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 18.3
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 18.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 18.3
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 18.2
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 18.2
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 18.2
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 18.2
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 18.1
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 18.1
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 18.0
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 17.9
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 17.9
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 17.8
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 17.8
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 17.8
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 17.8
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 17.7
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 17.6
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 17.6
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 17.6
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 17.5
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 17.5
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 17.5
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 17.4
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 17.4
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 17.4
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 17.2
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 17.2
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 17.2
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 17.1
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 17.1
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 17.1
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 17.1
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 17.1
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 17.0
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 16.8
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 16.7
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 16.6
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 16.6
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 16.6
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 16.6
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 16.4
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 16.4
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 16.4
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 16.3
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 16.3
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 16.2
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 16.1
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 16.1
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 16.1
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 16.1
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 16.1
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 16.1
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 16.0
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 16.0
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 16.0
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 16.0
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 15.9
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 15.9
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 15.9
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 15.9
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 15.7
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 15.7
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 15.6
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 15.6
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 15.6
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 15.6
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 15.5
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 15.5
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 15.4
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 15.4
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 15.3
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 15.3
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 15.1
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 15.0
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 14.9
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 14.9
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 14.8
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 14.8
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 14.8
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 14.7
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 14.6
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 14.4
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 14.4
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 14.3
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 14.2
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 14.1
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 14.0
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 14.0
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 14.0
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 14.0
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 13.9
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 13.9
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 13.4
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 13.3
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 13.0
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 13.0
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 13.0
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 12.9
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 12.9
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 12.8
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 12.8
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 12.4
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 12.1
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 11.6
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 11.3
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 9.1
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Brain - Putamen (basal ganglia)
Average nTPM: 23.4
Samples: 205

Max nTPM: 40.9
Min nTPM: 9.6
Std nTPM: 5.1
Median nTPM: 23.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 40.9
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 39.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 37.4
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 37.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 35.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 35.1
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 33.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 33.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 33.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 32.9
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 32.4
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 32.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 32.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 31.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 30.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 30.1
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 30.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 29.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 29.2
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 29.0
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 29.0
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 29.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 28.9
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 28.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 28.6
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 28.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 28.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 28.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 28.2
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 28.1
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 28.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 28.0
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 27.9
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 27.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 27.9
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 27.9
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 27.7
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 27.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 27.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 27.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 27.3
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 27.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 27.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 27.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 27.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 26.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 26.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 26.8
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 26.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 26.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 26.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 26.5
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 26.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 26.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 26.2
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 26.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 26.2
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 26.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 25.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 25.9
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 25.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 25.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 25.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 25.7
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 25.7
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 25.6
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 25.6
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 25.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 25.4
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 25.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 25.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 25.3
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 25.3
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 25.2
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 25.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 25.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 25.0
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 25.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 24.9
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 24.8
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 24.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 24.4
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 24.4
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 24.4
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 24.3
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 24.3
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 24.3
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 24.3
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 24.2
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 24.1
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 24.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 24.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 24.0
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 24.0
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 23.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 23.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 23.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 23.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 23.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 23.5
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 23.4
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 23.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 23.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 23.2
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 23.2
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 23.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 22.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 22.9
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 22.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 22.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 22.7
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 22.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 22.6
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 22.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 22.3
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 22.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 22.3
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 22.3
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 22.2
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 22.2
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 22.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 22.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 22.0
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 22.0
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 21.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 21.7
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 21.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 21.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 21.4
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 21.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 21.4
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 21.4
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 21.3
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 21.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 21.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 21.1
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 21.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 21.1
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 21.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 21.1
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 21.0
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 21.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 20.9
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 20.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 20.9
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 20.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 20.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 20.3
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 20.2
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 20.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 20.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 19.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 19.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 19.7
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 19.6
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 19.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 19.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 19.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 19.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 19.0
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 19.0
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 19.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 18.9
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 18.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 18.8
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 18.7
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 18.5
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 18.5
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 18.3
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 18.2
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 18.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 18.1
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 18.0
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 17.8
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 17.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 17.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 17.6
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 17.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 17.6
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 17.5
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 17.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 17.5
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 17.5
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 17.3
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 17.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 17.2
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 17.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 17.0
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 16.9
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 16.9
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 16.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 16.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 16.7
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 16.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 15.9
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 15.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 15.5
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 15.5
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 15.3
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 15.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 14.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 14.5
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 13.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 10.8
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 9.6
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

41.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 24.7
FF:10164-103B2 76 years, female 24.7
Nucleus accumbens
Scaled Tags Per Million: 41.1
FF:10037-101F1 23-56 years, mixed 41.1
Putamen
Scaled Tags Per Million: 22.8
FF:10176-103C5 60 years, female 22.8
Globus pallidus
Scaled Tags Per Million: 33.3
FF:10175-103C4 60 years, female 36.8
FF:10161-103A8 76 years, female 29.7

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

22.4
Pig sample Sample description nTPM
Caudate
nTPM: 18.8
Samples: 4

Max nTPM: 23.6
Min nTPM: 15.0
Sample A Female 15.0
Sample B Female 18.7
Sample C Male 23.6
Sample D Male 17.7
Putamen
nTPM: 22.4
Samples: 4

Max nTPM: 31.7
Min nTPM: 17.9
Sample A Female 18.6
Sample B Female 17.9
Sample C Male 31.7
Sample D Male 21.5
Septum
nTPM: 17.4
Samples: 4

Max nTPM: 19.4
Min nTPM: 15.7
Sample A Female 15.7
Sample B Female 16.5
Sample C Male 19.4
Sample D Male 18.0
Ventral pallidum
nTPM: 17.2
Samples: 4

Max nTPM: 20.2
Min nTPM: 14.4
Sample A Female 14.4
Sample B Female 19.6
Sample C Male 20.2
Sample D Male 14.4

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

70.1
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 62.4
Samples: 4

Max nTPM: 68.0
Min nTPM: 59.0
Sample A Male 63.0
Sample B Male 59.4
Sample C Female 59.0
Sample D Female 68.0
Septum
nTPM: 70.1
Samples: 4

Max nTPM: 81.8
Min nTPM: 63.4
Sample A Male 63.4
Sample B Male 81.8
Sample C Female 70.6
Sample D Female 64.7
Ventral forebrain
nTPM: 69.2
Samples: 4

Max nTPM: 73.8
Min nTPM: 64.6
Sample A Male 64.6
Sample B Male 69.3
Sample C Female 73.8
Sample D Female 68.9

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

2.9
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 2.6
68637665 Antisense, RP_050126_01_D03, Mouse strain C57BL/6J (56 days, male) 2.6
Pallidum
Expression energy: 2.9
68637665 Antisense, RP_050126_01_D03, Mouse strain C57BL/6J (56 days, male) 2.9

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