HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:90.6 nTPM
HPA Brain:69.1 nTPM
GTEx:90.6 nTPM
FANTOM5:17.4 Scaled Tags Per Million
Pig:39.2 nTPM
Mouse:57.6 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB011201
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 69.1
Sample id Sample description nTPM
Hippocampus
nTPM: 54.6
1898 Male, age 80, left hemisphere 73.5
2621 Female, age 67, right hemisphere 64.6
2529 Female, age 94, left hemisphere 52.1
2148 Female, age 91, left hemisphere 47.2
1911 Female, age 85, right hemisphere 45.8
1855 Male, age 76, left hemisphere 44.6
Dentate gyrus
nTPM: 57.0
2530 Female, age 94, left hemisphere 77.9
1927 Female, age 91, both hemispheres 63.3
2246 Female, age 85, both hemispheres 52.1
2528 Male, age 74, both hemispheres 51.0
2010 Male, age 76, both hemispheres 50.2
2531 Female, age 67, both hemispheres 47.8
Entorhinal gyrus
nTPM: 62.4
2613 Female, age 94, left hemisphere 87.7
2764 Male, age 80, right hemisphere 73.2
1938 Female, age 85, left hemisphere 64.8
1787 Male, age 76, left hemisphere 56.8
2686 Male, age 75, right hemisphere 51.8
2117 Female, age 91, right hemisphere 40.5
Hippocampus, CA1
nTPM: 62.1
2749 Male, age 80, left hemisphere 112.0
2527 Male, age 74, both hemispheres 64.8
2082 Female, age 91, right hemisphere 47.8
1873 Female, age 85, both hemispheres 47.5
2045 Male, age 76, both hemispheres 38.6
Hippocampus, CA2
nTPM: 59.2
1963 Male, age 80, left hemisphere 75.1
2437 Female, age 94, left hemisphere 67.4
2249 Male, age 74, both hemispheres 55.6
1892 Male, age 76, both hemispheres 54.9
1940 Female, age 85, left hemisphere 53.4
2113 Female, age 91, right hemisphere 48.8
Hippocampus, CA3
nTPM: 56.1
2137 Male, age 80, left hemisphere 85.7
2861 Female, age 67, both hemispheres 61.9
2436 Male, age 74, both hemispheres 49.6
1867 Male, age 76, both hemispheres 48.0
2620 Female, age 94, left hemisphere 47.6
1891 Female, age 85, both hemispheres 43.7
Parahippocampal cortex
nTPM: 59.6
2245 Female, age 91, both hemispheres 67.7
2250 Female, age 67, right hemisphere 67.3
1850 Male, age 80, both hemispheres 64.9
1933 Female, age 85, both hemispheres 63.8
1990 Female, age 91, right hemisphere 60.4
2622 Female, age 67, right hemisphere 60.1
2693 Female, age 94, both hemispheres 56.7
2692 Male, age 74, both hemispheres 55.9
2532 Female, age 72, left hemisphere 52.9
2018 Male, age 76, both hemispheres 46.7
Perirhinal gyrus
nTPM: 69.1
1847 Female, age 91, left hemisphere 83.3
2521 Female, age 94, right hemisphere 81.3
1794 Male, age 80, right hemisphere 73.7
1841 Female, age 85, right hemisphere 63.3
2848 Male, age 76, right hemisphere 43.7
Subiculum
nTPM: 52.4
1977 Female, age 85, both hemispheres 63.6
2619 Male, age 74, both hemispheres 63.0
1901 Male, age 80, both hemispheres 59.0
2438 Female, age 94, left hemisphere 54.9
2042 Male, age 76, both hemispheres 37.6
2729 Female, age 91, right hemisphere 36.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 90.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 90.6
Samples: 197

Max nTPM: 251.3
Min nTPM: 25.4
Std nTPM: 40.6
Median nTPM: 85.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 251.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 220.6
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 201.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 193.5
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 183.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 183.8
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 178.9
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 178.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 173.6
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 172.3
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 171.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 17.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 17.4
FF:10169-103B7 60 years, female 17.6
FF:10153-102I9 76 years, female 17.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 39.2
Pig sample Sample description nTPM
Subiculum
nTPM: 33.5
Samples: 4

Max nTPM: 47.8
Min nTPM: 26.7
Sample A Female 47.8
Sample B Female 29.6
Sample C Male 30.0
Sample D Male 26.7
Dorsal hippocampus
nTPM: 30.3
Samples: 4

Max nTPM: 40.5
Min nTPM: 20.6
Sample A Female 40.5
Sample B Female 30.6
Sample C Male 29.6
Sample D Male 20.6
Entorhinal cortex
nTPM: 39.2
Samples: 4

Max nTPM: 46.5
Min nTPM: 33.8
Sample A Female 35.6
Sample B Female 41.0
Sample C Male 46.5
Sample D Male 33.8
Ventral hippocampus
nTPM: 29.2
Samples: 4

Max nTPM: 37.8
Min nTPM: 20.8
Sample A Female 27.4
Sample B Female 20.8
Sample C Male 37.8
Sample D Male 30.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 57.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 55.5
Samples: 4

Max nTPM: 58.7
Min nTPM: 52.7
Sample A Male 54.8
Sample B Male 58.7
Sample C Female 52.7
Sample D Female 55.6
Hippocampal formation
nTPM: 57.6
Samples: 4

Max nTPM: 60.2
Min nTPM: 55.4
Sample A Male 55.4
Sample B Male 57.5
Sample C Female 60.2
Sample D Female 57.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
1604 Antisense, RP_040428_01_B12, Mouse strain C57BL/6J (56 days, male) 0.6
1603 Antisense, RP_040428_01_B12, Mouse strain C57BL/6J (56 days, male) 0.2

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