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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:254.0 nTPM
HPA Brain:67.9 nTPM
GTEx:254.0 nTPM
FANTOM5:212.9 Scaled Tags Per Million
Pig:102.6 nTPM
Mouse:259.3 nTPM
Allen mouse:10.7 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody CAB004082
Glial cells Low
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

67.9
Sample id Sample description nTPM
Caudate nucleus
nTPM: 65.3
2846 Female, age 79, unknown 81.3
1857 Female, age 85, left hemisphere 76.9
2290 Female, age 72, unknown 69.2
2481 Female, age 94, left hemisphere 66.2
1854 Male, age 80, left hemisphere 66.0
1781 Male, age 74, unknown 61.8
2288 Male, age 75, left hemisphere 59.5
2289 Male, age 61, right hemisphere 41.5
Globus pallidus, externus
nTPM: 46.3
2772 Female, age 79, unknown 59.0
2395 Male, age 75, both hemispheres 57.4
1996 Male, age 80, right hemisphere 50.9
2646 Male, age 61, right hemisphere 33.4
2567 Female, age 72, unknown 30.6
Globus pallidus, internus
nTPM: 49.9
2287 Male, age 75, right hemisphere 62.9
2483 Female, age 94, right hemisphere 55.6
1818 Male, age 74, unknown 54.3
2037 Male, age 80, right hemisphere 53.9
2778 Female, age 91, both hemispheres 48.3
2566 Female, age 72, unknown 40.6
2111 Female, age 85, right hemisphere 33.8
Nucleus accumbens
nTPM: 64.3
1856 Female, age 91, right hemisphere 83.6
2698 Female, age 72, unknown 75.4
1783 Male, age 74, unknown 66.0
2286 Male, age 75, left hemisphere 64.6
1806 Female, age 85, left hemisphere 63.7
2824 Male, age 61, right hemisphere 63.6
2391 Female, age 94, left hemisphere 56.8
2732 Male, age 80, right hemisphere 40.9
Nucleus basalis of Meynert
nTPM: 52.7
2821 Male, age 75, both hemispheres 70.4
2393 Male, age 80, right hemisphere 59.7
2484 Female, age 94, left hemisphere 47.9
2569 Male, age 61, both hemispheres 32.8
Nucleus of the diagonal band
nTPM: 67.9
1812 Female, age 91, both hemispheres 82.1
2775 Male, age 80, right hemisphere 74.4
2029 Male, age 61, right hemisphere 66.5
2195 Female, age 85, both hemispheres 65.1
1979 Male, age 74, unknown 51.7
Putamen
nTPM: 60.4
1838 Male, age 80, right hemisphere 69.8
1937 Female, age 91, right hemisphere 69.8
2466 Female, age 79, unknown 67.6
2482 Female, age 94, left hemisphere 63.2
1829 Male, age 74, unknown 56.8
2647 Male, age 75, left hemisphere 51.8
2489 Female, age 72, unknown 43.5
Septal nuclei
nTPM: 59.7
2031 Female, age 72, unknown 76.2
2629 Female, age 94, right hemisphere 72.8
1960 Male, age 74, unknown 71.9
2009 Female, age 91, both hemispheres 60.3
2059 Female, age 85, both hemispheres 49.7
2199 Male, age 80, right hemisphere 46.4
2394 Male, age 61, left hemisphere 40.7
Stria terminalis, bed nucleus
nTPM: 55.5
1974 Female, age 91, both hemispheres 74.6
2486 Female, age 94, both hemispheres 48.3
2201 Male, age 74, unknown 43.6

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

254.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 224.1
Samples: 246

Max nTPM: 613.5
Min nTPM: 99.3
Std nTPM: 68.3
Median nTPM: 214.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 613.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 475.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 443.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 432.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 412.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 397.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 395.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 389.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 384.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 373.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 364.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 351.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 349.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 348.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 343.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 341.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 337.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 331.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 329.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 318.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 317.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 315.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 303.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 303.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 303.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 301.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 301.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 298.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 297.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 294.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 294.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 291.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 291.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 291.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 285.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 281.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 280.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 278.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 276.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 275.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 275.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 272.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 268.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 268.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 267.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 267.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 267.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 266.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 265.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 264.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 263.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 263.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 262.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 260.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 258.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 258.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 257.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 256.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 255.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 255.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 254.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 253.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 252.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 251.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 250.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 250.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 249.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 248.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 248.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 247.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 247.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 246.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 245.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 245.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 245.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 244.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 243.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 243.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 241.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 237.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 237.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 237.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 236.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 235.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 235.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 235.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 234.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 234.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 232.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 232.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 232.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 231.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 230.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 230.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 230.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 230.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 229.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 229.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 229.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 228.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 227.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 227.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 226.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 226.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 226.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 225.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 225.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 224.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 223.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 223.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 222.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 221.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 221.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 219.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 219.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 219.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 219.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 218.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 218.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 218.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 217.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 216.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 215.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 214.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 213.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 213.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 212.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 212.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 211.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 210.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 208.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 207.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 207.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 207.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 207.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 206.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 206.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 206.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 205.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 205.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 205.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 205.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 204.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 204.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 204.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 203.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 202.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 201.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 201.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 201.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 201.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 201.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 200.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 200.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 196.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 196.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 195.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 195.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 194.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 194.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 194.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 193.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 191.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 191.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 191.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 190.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 190.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 189.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 189.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 188.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 187.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 185.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 185.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 185.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 184.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 184.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 183.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 183.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 183.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 183.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 183.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 182.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 181.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 181.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 179.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 179.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 178.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 178.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 176.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 176.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 176.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 176.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 174.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 174.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 174.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 173.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 172.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 172.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 170.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 170.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 170.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 168.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 167.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 167.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 166.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 166.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 165.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 164.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 164.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 163.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 162.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 162.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 162.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 161.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 161.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 158.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 158.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 155.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 154.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 153.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 153.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 150.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 149.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 146.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 146.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 145.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 144.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 143.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 143.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 142.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 138.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 137.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 132.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 130.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 130.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 129.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 129.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 128.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 123.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 119.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 117.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 114.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 113.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 110.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 109.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 99.3
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 254.0
Samples: 246

Max nTPM: 548.4
Min nTPM: 116.2
Std nTPM: 66.0
Median nTPM: 247.6
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 548.4
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 492.0
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 478.1
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 468.9
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 436.9
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 414.0
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 411.9
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 393.0
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 387.2
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 378.7
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 374.8
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 371.1
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 370.2
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 356.3
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 354.4
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 353.9
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 353.8
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 348.2
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 347.0
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 342.5
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 342.3
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 341.9
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 337.9
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 337.2
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 336.3
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 335.6
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 331.1
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 330.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 330.5
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 330.3
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 327.6
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 322.6
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 321.8
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 319.3
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 318.1
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 318.1
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 317.8
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 317.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 314.9
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 313.5
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 311.8
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 311.7
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 309.1
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 308.6
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 307.3
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 305.8
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 304.8
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 304.5
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 303.9
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 303.7
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 301.4
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 298.2
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 298.2
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 296.7
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 296.7
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 295.4
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 295.4
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 295.1
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 291.1
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 290.7
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 288.6
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 287.9
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 285.0
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 284.9
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 283.2
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 282.8
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 281.7
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 281.4
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 280.9
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 280.8
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 280.0
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 279.5
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 278.1
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 277.3
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 276.6
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 275.1
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 273.9
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 273.3
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 273.0
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 270.5
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 270.2
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 270.0
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 268.4
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 267.4
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 267.2
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 265.3
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 265.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 265.1
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 265.0
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 265.0
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 264.4
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 264.3
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 264.1
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 263.7
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 263.7
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 263.5
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 263.2
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 262.8
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 262.7
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 262.5
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 261.9
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 260.6
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 259.5
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 259.4
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 257.7
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 257.4
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 257.0
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 256.2
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 256.1
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 254.7
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 253.6
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 253.3
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 252.7
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 252.6
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 252.5
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 252.4
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 252.0
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 251.0
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 250.9
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 250.0
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 248.5
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 247.8
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 247.7
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 247.6
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 246.8
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 246.5
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 246.5
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 245.8
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 245.5
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 244.4
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 244.2
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 243.1
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 242.9
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 241.8
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 241.2
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 241.2
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 241.1
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 239.4
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 239.1
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 238.2
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 237.3
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 237.2
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 236.9
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 236.6
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 236.3
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 236.0
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 235.7
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 235.2
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 235.0
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 234.4
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 233.6
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 228.2
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 228.0
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 227.3
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 227.3
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 227.1
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 226.9
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 226.4
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 226.2
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 226.1
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 225.2
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 225.0
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 225.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 224.9
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 222.1
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 221.9
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 220.8
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 220.2
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 219.5
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 217.6
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 217.3
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 216.7
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 216.3
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 216.2
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 216.2
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 215.7
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 215.2
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 214.6
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 214.6
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 214.4
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 213.5
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 212.9
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 211.4
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 210.9
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 209.8
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 208.8
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 206.8
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 206.3
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 205.8
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 205.7
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 205.3
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 203.9
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 201.4
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 201.2
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 200.6
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 200.2
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 200.1
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 199.2
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 198.6
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 198.3
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 198.0
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 197.1
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 196.7
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 196.0
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 195.9
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 195.9
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 195.7
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 195.2
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 192.4
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 191.5
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 190.1
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 189.9
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 189.3
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 188.2
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 188.0
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 187.9
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 187.0
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 186.6
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 185.0
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 184.7
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 183.3
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 183.2
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 181.4
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 180.3
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 175.0
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 174.6
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 174.0
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 173.9
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 172.9
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 172.8
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 168.1
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 165.5
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 162.8
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 160.2
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 157.5
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 154.5
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 152.5
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 148.7
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 148.4
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 139.6
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 138.4
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 137.1
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 133.0
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 120.9
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 117.6
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 116.2
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Brain - Putamen (basal ganglia)
Average nTPM: 233.5
Samples: 205

Max nTPM: 429.8
Min nTPM: 107.7
Std nTPM: 59.8
Median nTPM: 224.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 429.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 411.8
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 408.9
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 385.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 378.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 369.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 364.8
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 346.7
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 343.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 341.6
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 341.0
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 337.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 337.2
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 337.0
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 335.6
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 326.5
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 320.2
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 317.9
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 317.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 315.9
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 311.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 311.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 306.2
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 305.4
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 305.1
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 303.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 302.6
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 302.4
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 302.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 299.5
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 296.6
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 296.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 291.3
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 290.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 289.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 286.9
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 286.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 285.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 284.6
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 282.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 282.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 282.0
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 279.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 279.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 278.8
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 278.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 277.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 277.5
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 277.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 275.5
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 274.7
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 274.0
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 273.3
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 273.2
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 271.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 270.3
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 268.6
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 268.2
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 267.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 266.5
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 265.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 264.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 263.0
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 262.3
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 262.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 258.5
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 257.1
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 253.3
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 252.8
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 250.8
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 247.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 247.5
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 247.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 246.8
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 246.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 245.6
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 244.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 244.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 244.0
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 243.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 242.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 242.7
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 240.3
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 240.3
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 239.8
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 239.0
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 238.8
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 237.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 236.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 236.0
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 235.5
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 234.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 231.0
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 230.9
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 230.2
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 230.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 229.0
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 228.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 227.4
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 226.7
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 226.4
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 225.1
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 224.1
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 222.9
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 222.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 222.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 221.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 221.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 221.0
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 219.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 219.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 219.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 217.9
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 217.8
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 217.2
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 216.9
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 216.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 215.4
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 215.4
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 213.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 211.6
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 211.4
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 210.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 208.6
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 207.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 207.9
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 207.2
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 204.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 204.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 204.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 203.9
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 203.6
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 201.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 201.2
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 200.4
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 198.4
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 197.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 197.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 196.4
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 196.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 195.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 195.4
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 194.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 194.0
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 193.8
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 193.7
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 193.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 193.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 192.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 192.0
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 191.9
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 191.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 191.3
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 191.0
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 190.0
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 190.0
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 189.4
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 187.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 187.7
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 187.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 186.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 186.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 186.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 185.1
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 184.6
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 183.0
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 182.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 182.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 178.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 177.9
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 177.0
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 173.3
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 172.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 172.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 169.9
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 169.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 168.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 168.2
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 167.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 167.2
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 166.5
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 166.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 165.9
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 165.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 164.8
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 162.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 162.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 159.8
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 159.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 159.1
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 159.1
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 158.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 158.0
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 157.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 153.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 151.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 146.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 145.4
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 144.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 139.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 136.5
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 135.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 129.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 113.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 107.7
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

212.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 186.9
FF:10164-103B2 76 years, female 186.9
Nucleus accumbens
Scaled Tags Per Million: 156.7
FF:10037-101F1 23-56 years, mixed 156.7
Putamen
Scaled Tags Per Million: 212.9
FF:10176-103C5 60 years, female 212.9
Globus pallidus
Scaled Tags Per Million: 119.3
FF:10161-103A8 76 years, female 129.5
FF:10175-103C4 60 years, female 109.0

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

102.6
Pig sample Sample description nTPM
Caudate
nTPM: 92.2
Samples: 4

Max nTPM: 104.8
Min nTPM: 81.1
Sample A Female 86.9
Sample B Female 95.9
Sample C Male 104.8
Sample D Male 81.1
Putamen
nTPM: 102.7
Samples: 4

Max nTPM: 129.8
Min nTPM: 85.6
Sample A Female 90.4
Sample B Female 85.6
Sample C Male 129.8
Sample D Male 104.9
Septum
nTPM: 89.0
Samples: 4

Max nTPM: 94.9
Min nTPM: 79.7
Sample A Female 94.9
Sample B Female 90.2
Sample C Male 91.3
Sample D Male 79.7
Ventral pallidum
nTPM: 84.2
Samples: 4

Max nTPM: 101.2
Min nTPM: 74.5
Sample A Female 76.3
Sample B Female 101.2
Sample C Male 84.7
Sample D Male 74.5

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

259.3
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 222.5
Samples: 4

Max nTPM: 234.3
Min nTPM: 204.9
Sample A Male 204.9
Sample B Male 234.3
Sample C Female 230.7
Sample D Female 219.9
Septum
nTPM: 259.3
Samples: 4

Max nTPM: 282.8
Min nTPM: 231.1
Sample A Male 231.1
Sample B Male 281.2
Sample C Female 282.8
Sample D Female 242.2
Ventral forebrain
nTPM: 228.1
Samples: 4

Max nTPM: 253.1
Min nTPM: 205.0
Sample A Male 205.0
Sample B Male 219.3
Sample C Female 253.1
Sample D Female 235.1

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

10.7
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 10.7
393259 Antisense, RP_040809_01_B01, Mouse strain C57BL/6J (56 days, male) 10.7
Pallidum
Expression energy: 9.5
393259 Antisense, RP_040809_01_B01, Mouse strain C57BL/6J (56 days, male) 9.5

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