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TISSUE PRIMARY DATA LIVER Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Liver
Tissue proteome
Liver
LIVER - Expression summary
Protein expression
Liveri

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Cholangiocytes: Not detected
Hepatocytes: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:491.3 nTPM
HPA:491.3 nTPM
GTEx:239.4 nTPM
FANTOM5:699.1 Scaled Tags Per Million

LIVER - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA057503
Cholangiocytes Not detected
Hepatocytes Medium



LIVER - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

491.3
N/A
Female, age 60
Liver sample 21
nTPM: 389.6
overview
Male, age 54
Liver sample 23
nTPM: 395.2
Cell types%
Hepatocytes:
80

Fibroblasts:
15

Other cell types:
5

overview
Male, age 74
Liver sample 24
nTPM: 339.4
Cell types%
Hepatocytes:
85

Fibroblasts:
5

Other cell types:
10

overview
Female, age 62
Liver sample 350
nTPM: 695
Cell types%
Hepatocytes:
70

Fibroblasts:
10

Other cell types:
20

overview
Male, age 78
Liver sample 351
nTPM: 505.5
Cell types%
Hepatocytes:
75

Fibroblasts:
5

Other cell types:
20

overview
Male, age 53
Liver sample 352
nTPM: 475.4
Cell types%
Hepatocytes:
80

Fibroblasts:
5

Other cell types:
15

overview
Male, age 77
Liver sample 353
nTPM: 339.8
Cell types%
Hepatocytes:
75

Fibroblasts:
5

Other cell types:
20

overview
Female, age 72
Liver sample 359
nTPM: 615.9
Cell types%
Hepatocytes:
50

Fibroblasts:
10

Other cell types:
40

overview
Male, age 70
Liver sample 367
nTPM: 575.2
Cell types%
Hepatocytes:
65

Fibroblasts:
10

Other cell types:
25

overview
Female, age 23
Liver sample 396
nTPM: 581.9
Cell types%
Hepatocytes:
70

Fibroblasts:
5

Other cell types:
25


LIVER - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

239.4
GTEx sample id Sample description nTPM
Liver
Average nTPM: 239.4
Samples: 226

Max nTPM: 550.2
Min nTPM: 18.0
Std nTPM: 100.8
Median nTPM: 233.4
GTEX-139TS-1426-SM-5IFJD 60-69 years, male 550.2
GTEX-1GZ4I-1526-SM-9OSW9 50-59 years, male 525.3
GTEX-14DAQ-1726-SM-5S2R2 60-69 years, female 520.7
GTEX-1J8EW-1626-SM-C1YQ8 60-69 years, female 497.9
GTEX-132NY-0926-SM-5P9G3 60-69 years, male 485.1
GTEX-1CB4F-1726-SM-7MGXH 60-69 years, male 477.6
GTEX-14BIL-1326-SM-79OMR 50-59 years, male 448.2
GTEX-12WSD-1426-SM-5GCN9 60-69 years, female 442.5
GTEX-1A8FM-1226-SM-7IGMD 50-59 years, female 440.2
GTEX-14JG1-1626-SM-664NH 40-49 years, male 433.2
GTEX-1QP6S-1326-SM-DPRZ8 40-49 years, male 426.3
GTEX-PX3G-0826-SM-48TZS 20-29 years, female 401.1
GTEX-YECK-1926-SM-4W21H 60-69 years, male 400.5
GTEX-1JJEA-1526-SM-CNNPK 60-69 years, male 396.5
GTEX-1HBPI-1026-SM-AHZ4N 50-59 years, male 395.3
GTEX-1GN1U-0926-SM-9WPPY 50-59 years, female 394.5
GTEX-1IKJJ-1526-SM-C1YSC 60-69 years, male 394.2
GTEX-OOBJ-0826-SM-3NB2K 60-69 years, male 384.6
GTEX-145MF-0826-SM-5QGQA 50-59 years, male 383.9
GTEX-QV44-0326-SM-C1YQX 50-59 years, male 379.7
GTEX-U3ZN-0226-SM-3DB8D 30-39 years, female 378.3
GTEX-14E7W-1526-SM-6871X 70-79 years, male 377.6
GTEX-1IKK5-0326-SM-C1YPY 60-69 years, male 375.2
GTEX-147F4-1426-SM-5LUA8 50-59 years, male 373.0
GTEX-11ZVC-0726-SM-5FQT9 50-59 years, female 370.7
GTEX-SJXC-1226-SM-4DM78 60-69 years, male 370.6
GTEX-RU72-1426-SM-46MUF 50-59 years, female 369.2
GTEX-1212Z-0226-SM-59HLF 60-69 years, male 363.0
GTEX-18465-1626-SM-7LG6N 50-59 years, male 360.1
GTEX-131YS-1626-SM-5HL6C 60-69 years, female 354.2
GTEX-R53T-0326-SM-48FEC 50-59 years, female 351.2
GTEX-14E1K-0326-SM-5S2PE 50-59 years, male 350.0
GTEX-ZF2S-3026-SM-4WWCH 50-59 years, female 342.1
GTEX-13FTZ-0726-SM-5IFFY 60-69 years, male 339.1
GTEX-RTLS-1326-SM-46MUN 60-69 years, female 337.9
GTEX-1B8L1-0726-SM-7P8RT 60-69 years, male 334.5
GTEX-14AS3-0126-SM-5Q5F4 40-49 years, female 334.1
GTEX-1B932-1426-SM-793AN 40-49 years, female 333.7
GTEX-1JJ6O-0826-SM-CXZJL 60-69 years, male 332.2
GTEX-1F75A-1626-SM-9JGGT 50-59 years, male 332.0
GTEX-1399R-1226-SM-5P9GF 30-39 years, male 330.4
GTEX-17HII-1026-SM-7IGLY 50-59 years, male 328.1
GTEX-145LU-1326-SM-5LU9N 50-59 years, male 326.5
GTEX-13VXU-0926-SM-5IFFH 50-59 years, male 326.3
GTEX-X4EO-1126-SM-4QARQ 60-69 years, female 320.6
GTEX-15ER7-1826-SM-6LLI7 20-29 years, female 312.6
GTEX-1JMLX-1326-SM-CXZJO 50-59 years, male 312.3
GTEX-18A7A-1526-SM-72D69 50-59 years, female 309.7
GTEX-1BAJH-1526-SM-7RHGI 70-79 years, male 309.0
GTEX-11OF3-0726-SM-5BC4Z 60-69 years, male 306.3
GTEX-131XH-0626-SM-5LZWH 50-59 years, male 306.0
GTEX-18A6Q-2026-SM-718AQ 60-69 years, male 306.0
GTEX-14A5I-1726-SM-5QGQ5 50-59 years, female 304.2
GTEX-1KD5A-1226-SM-CXZK7 50-59 years, male 300.8
GTEX-145MO-2326-SM-5NQ9K 60-69 years, male 300.7
GTEX-1399T-0826-SM-5IFES 60-69 years, male 300.4
GTEX-139TU-0826-SM-5IJFG 60-69 years, male 300.3
GTEX-1A32A-0826-SM-72D5C 50-59 years, female 300.3
GTEX-17EVP-1026-SM-7IGOZ 40-49 years, male 298.3
GTEX-UPK5-1426-SM-4JBHH 40-49 years, male 297.3
GTEX-13112-1426-SM-5EGH8 50-59 years, male 297.1
GTEX-X4EP-1026-SM-4QAS5 60-69 years, female 294.2
GTEX-RNOR-1426-SM-48FDJ 50-59 years, female 292.8
GTEX-1KAFJ-0726-SM-CXZKF 50-59 years, male 292.2
GTEX-YFC4-1526-SM-5IFJS 40-49 years, female 289.4
GTEX-147JS-1126-SM-5RQIW 60-69 years, male 289.0
GTEX-14753-1626-SM-5NQ9L 60-69 years, male 288.8
GTEX-1EN7A-2026-SM-7MGY4 40-49 years, male 288.4
GTEX-1HBPH-2626-SM-A96TV 40-49 years, female 285.6
GTEX-1GF9V-1226-SM-7MKGY 60-69 years, male 285.3
GTEX-13OW6-2626-SM-5IFF2 50-59 years, male 285.1
GTEX-ZAB5-0426-SM-5CVMI 50-59 years, male 284.0
GTEX-WQUQ-1926-SM-4OOSA 60-69 years, male 283.9
GTEX-TKQ2-1726-SM-4DXUP 50-59 years, male 282.6
GTEX-ZVT3-1626-SM-5GU66 60-69 years, female 282.6
GTEX-ZYT6-0626-SM-5E45V 30-39 years, male 281.6
GTEX-1NV8Z-1626-SM-DPRYT 60-69 years, male 278.4
GTEX-13X6J-1826-SM-5TDCT 50-59 years, male 278.0
GTEX-13SLX-1226-SM-5S2Q6 50-59 years, female 277.9
GTEX-1EWIQ-0726-SM-7MKFW 70-79 years, female 276.9
GTEX-1A8G7-1126-SM-731ED 60-69 years, male 276.6
GTEX-1GF9X-0426-SM-7MKHN 40-49 years, female 275.9
GTEX-1269C-0626-SM-5FQSS 60-69 years, female 273.8
GTEX-17HHE-0126-SM-79398 50-59 years, male 273.0
GTEX-Y111-0726-SM-EYYVM 50-59 years, male 273.0
GTEX-1PBJJ-0626-SM-DPRYO 30-39 years, male 266.6
GTEX-WVLH-2126-SM-EYYWD 50-59 years, male 262.0
GTEX-11DXZ-0126-SM-5EGGY 50-59 years, male 260.5
GTEX-WFON-1726-SM-4LVMQ 40-49 years, male 260.4
GTEX-11NUK-1226-SM-5P9GM 50-59 years, male 259.2
GTEX-T6MN-1226-SM-3NMA5 50-59 years, male 258.6
GTEX-11ZTS-1426-SM-5EQMM 60-69 years, female 257.1
GTEX-11NV4-1326-SM-5HL6V 60-69 years, male 256.2
GTEX-ZEX8-0826-SM-4WKHK 50-59 years, male 255.3
GTEX-11WQC-0726-SM-5EQMR 60-69 years, male 255.1
GTEX-S33H-1626-SM-4AD68 30-39 years, male 248.2
GTEX-144GL-1426-SM-79OMA 50-59 years, male 246.1
GTEX-1KD4Q-1526-SM-D4P3L 40-49 years, male 245.2
GTEX-12WSM-0726-SM-5GCOW 60-69 years, male 244.8
GTEX-Y5V5-0926-SM-4VBPZ 60-69 years, female 244.8
GTEX-13PVQ-1526-SM-5IFEQ 50-59 years, male 242.7
GTEX-1ICLY-1526-SM-C1YS4 50-59 years, male 242.3
GTEX-18A66-2026-SM-7189C 60-69 years, male 242.0
GTEX-12KS4-1326-SM-5LUB3 30-39 years, male 240.9
GTEX-ZVT4-0626-SM-5E45T 50-59 years, female 240.9
GTEX-O5YV-0726-SM-EV798 60-69 years, female 239.9
GTEX-QESD-2026-SM-447BI 20-29 years, male 239.7
GTEX-1HT8W-0826-SM-C1YRJ 30-39 years, male 238.5
GTEX-13N2G-0926-SM-5IFGJ 60-69 years, male 238.0
GTEX-1AMFI-0826-SM-731DV 50-59 years, female 238.0
GTEX-15RJ7-2026-SM-6LPJ4 40-49 years, male 233.9
GTEX-1GN73-1126-SM-9OSW5 60-69 years, male 233.8
GTEX-1I1GR-1526-SM-CNNQE 60-69 years, male 233.5
GTEX-1GN2E-0926-SM-9WPOH 60-69 years, male 233.3
GTEX-1H11D-0826-SM-9OSWB 40-49 years, male 233.0
GTEX-1I1HK-1126-SM-AHZ2L 60-69 years, male 231.9
GTEX-ZPU1-0826-SM-57WG2 40-49 years, male 230.7
GTEX-Y5LM-0426-SM-4VBRO 40-49 years, female 228.8
GTEX-RWSA-1426-SM-47JXA 40-49 years, male 227.9
GTEX-Q2AG-1126-SM-48U1P 40-49 years, female 227.3
GTEX-13NYB-1026-SM-5IFH3 40-49 years, male 224.9
GTEX-1AX9I-1626-SM-72D5D 60-69 years, male 224.2
GTEX-U8XE-1526-SM-4E3HT 30-39 years, male 222.5
GTEX-QEG4-1826-SM-CKZN9 30-39 years, male 220.6
GTEX-RN64-1826-SM-48FDV 50-59 years, male 220.0
GTEX-1EKGG-1226-SM-7IGNO 60-69 years, male 215.7
GTEX-1KANB-2226-SM-DHXJW 50-59 years, male 212.6
GTEX-Q734-0326-SM-48U15 40-49 years, female 212.1
GTEX-1EH9U-1126-SM-7IGLU 60-69 years, male 211.9
GTEX-WZTO-0626-SM-4PQYY 40-49 years, male 211.4
GTEX-Z9EW-0426-SM-5CVM9 40-49 years, male 210.9
GTEX-1LH75-0926-SM-EAZ5C 50-59 years, female 210.8
GTEX-1S82Y-1026-SM-EV7BJ 40-49 years, male 208.7
GTEX-15DYW-1326-SM-6LPIV 60-69 years, female 208.5
GTEX-1RQEC-1126-SM-EAZ5E 60-69 years, male 207.7
GTEX-13FLV-0326-SM-5N9DJ 50-59 years, male 206.3
GTEX-ZVP2-0626-SM-51MSO 50-59 years, male 206.2
GTEX-XBEC-1526-SM-4AT68 50-59 years, male 203.2
GTEX-P78B-1326-SM-3P611 40-49 years, female 202.0
GTEX-13113-1326-SM-5GCOI 60-69 years, female 201.8
GTEX-1HCU7-1726-SM-B2LX9 50-59 years, male 201.6
GTEX-1ICG6-1026-SM-B2LY6 70-79 years, female 200.3
GTEX-UTHO-2426-SM-4JBHD 60-69 years, male 197.9
GTEX-11ZUS-2526-SM-59872 30-39 years, male 197.4
GTEX-X3Y1-2726-SM-4PQZH 40-49 years, male 197.4
GTEX-X261-1726-SM-4PQYT 50-59 years, male 197.1
GTEX-1R9JW-0826-SM-DPRZJ 30-39 years, female 195.8
GTEX-1QCLZ-1226-SM-EAZ49 60-69 years, female 194.5
GTEX-11DXY-0526-SM-5EGGQ 60-69 years, male 194.2
GTEX-1S5VW-1826-SM-EAZ53 60-69 years, male 193.6
GTEX-VUSG-0126-SM-4KL1X 50-59 years, male 193.0
GTEX-13NZB-0626-SM-5IFH6 30-39 years, male 191.9
GTEX-RM2N-1926-SM-48FCU 50-59 years, male 191.1
GTEX-OIZF-0826-SM-3MJGO 60-69 years, male 191.1
GTEX-1CAMQ-1426-SM-7MKFL 40-49 years, male 190.5
GTEX-1QPFJ-1126-SM-E9U5V 30-39 years, female 189.0
GTEX-11EQ9-0526-SM-5A5JZ 30-39 years, male 188.3
GTEX-ZYY3-0626-SM-5NQ6W 60-69 years, female 187.6
GTEX-15SZO-1226-SM-6LPIP 50-59 years, male 185.6
GTEX-REY6-1226-SM-48FDR 60-69 years, male 183.9
GTEX-1B933-1226-SM-731DW 50-59 years, female 183.6
GTEX-11GSP-0626-SM-5986T 60-69 years, female 182.5
GTEX-146FH-1526-SM-5NQBU 50-59 years, female 181.2
GTEX-1PIIG-1326-SM-EXOIR 30-39 years, male 180.1
GTEX-YEC4-0826-SM-5P9FV 40-49 years, male 178.0
GTEX-17F96-1226-SM-79OK2 70-79 years, male 175.9
GTEX-1HCVE-1526-SM-B2LWW 50-59 years, male 175.4
GTEX-15RJE-1126-SM-6LPI5 40-49 years, male 175.3
GTEX-1KWVE-0326-SM-EV7AF 30-39 years, male 171.6
GTEX-WK11-1326-SM-4OOSI 50-59 years, male 170.9
GTEX-14PHX-0526-SM-664NW 50-59 years, male 167.3
GTEX-15SHU-1826-SM-7KUKS 40-49 years, female 167.3
GTEX-1QP66-0226-SM-DPRXS 50-59 years, male 166.7
GTEX-QEL4-1226-SM-447A4 50-59 years, male 166.5
GTEX-ZAB4-0826-SM-5LU9D 40-49 years, male 163.7
GTEX-13PVR-0126-SM-5S2PY 60-69 years, female 163.4
GTEX-S4Z8-0526-SM-4AD4T 60-69 years, male 160.0
GTEX-WYVS-1926-SM-4PQZ2 40-49 years, female 160.0
GTEX-148VI-0626-SM-5TDDH 60-69 years, female 159.8
GTEX-1GF9W-0826-SM-7MKHI 60-69 years, male 158.9
GTEX-13NZ9-1326-SM-5MR3V 50-59 years, male 158.4
GTEX-12ZZZ-1326-SM-59HKW 60-69 years, male 157.5
GTEX-ZZPU-0426-SM-5GZYH 50-59 years, female 157.0
GTEX-1AX8Z-1026-SM-7189R 60-69 years, male 156.0
GTEX-13QJC-0726-SM-5RQJK 60-69 years, female 154.6
GTEX-P44G-1126-SM-3NM9D 30-39 years, male 151.8
GTEX-12WSL-0226-SM-5CVMJ 50-59 years, male 150.4
GTEX-1C6VQ-1626-SM-79OO1 50-59 years, male 149.2
GTEX-12WSI-0226-SM-5GCNA 50-59 years, male 148.9
GTEX-WY7C-0726-SM-4ONCB 50-59 years, male 144.3
GTEX-ZF29-2026-SM-DNZYW 60-69 years, female 143.9
GTEX-17HGU-1826-SM-7IGQM 50-59 years, male 137.4
GTEX-1B996-1426-SM-7EPIA 60-69 years, male 135.5
GTEX-12696-0826-SM-5EGGE 60-69 years, male 134.3
GTEX-13FTW-1126-SM-5J2NV 40-49 years, male 133.9
GTEX-1E2YA-1226-SM-7MGY3 50-59 years, male 131.5
GTEX-147GR-1326-SM-7IGLB 60-69 years, male 126.4
GTEX-14C38-1526-SM-5RQJ7 50-59 years, male 121.9
GTEX-139YR-0226-SM-5IFEM 50-59 years, male 116.2
GTEX-13O3O-1826-SM-5IFGW 60-69 years, female 115.8
GTEX-17MF6-1126-SM-7DUFS 40-49 years, male 115.6
GTEX-144GM-1326-SM-5LU5E 20-29 years, male 113.1
GTEX-XXEK-1126-SM-4BRUX 50-59 years, male 112.1
GTEX-1HB9E-0626-SM-AHZ4K 50-59 years, male 107.2
GTEX-18D9B-1526-SM-7KFRK 60-69 years, male 105.2
GTEX-1K9T9-0726-SM-CXZJZ 50-59 years, female 103.6
GTEX-11TUW-1726-SM-5BC5C 60-69 years, male 101.9
GTEX-ZTPG-1426-SM-51MT3 20-29 years, female 97.3
GTEX-12WSG-0626-SM-5FQTQ 50-59 years, female 95.7
GTEX-1LGRB-0626-SM-CNNQH 50-59 years, female 92.0
GTEX-13N11-0926-SM-5IJG2 50-59 years, female 90.6
GTEX-1B8SG-1326-SM-79ONT 50-59 years, male 88.6
GTEX-1MJIX-0726-SM-DPRYP 40-49 years, male 88.1
GTEX-131XE-0326-SM-5LZVO 50-59 years, male 84.6
GTEX-X4XY-1626-SM-46MVN 60-69 years, male 84.6
GTEX-14XAO-0226-SM-68728 60-69 years, female 83.8
GTEX-YB5E-0326-SM-5IFHU 40-49 years, male 75.9
GTEX-11TT1-1726-SM-5EQLJ 20-29 years, male 67.4
GTEX-1497J-0726-SM-5Q5D1 60-69 years, male 62.9
GTEX-132AR-0426-SM-5IFH8 50-59 years, female 59.0
GTEX-1CB4J-0726-SM-7IGN8 60-69 years, male 56.0
GTEX-QDVN-0826-SM-48TZ2 50-59 years, male 55.9
GTEX-S32W-1926-SM-4AD63 50-59 years, female 55.6
GTEX-14PJO-1726-SM-68719 60-69 years, male 51.2
GTEX-13O1R-2026-SM-5KM3N 60-69 years, male 25.8
GTEX-O5YT-0826-SM-3TW8N 20-29 years, male 18.0
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LIVER - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

699.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Liver
Scaled Tags Per Million: 699.1
FF:10018-101C9 64,69,70 years, mixed 699.1

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