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SEC14L1
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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:57.4 nTPM
HPA Brain:148.4 nTPM
GTEx:57.4 nTPM
FANTOM5:167.3 Scaled Tags Per Million
Pig:60.0 nTPM
Mouse:151.0 nTPM
Allen mouse:8.8 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA021463Antibody HPA028703
Glial cells LowMedium
Neuronal cells MediumLow





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

148.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 126.4
2846 Female, age 79, unknown 162.7
2289 Male, age 61, right hemisphere 136.4
1781 Male, age 74, unknown 127.5
1854 Male, age 80, left hemisphere 126.7
2290 Female, age 72, unknown 125.6
1857 Female, age 85, left hemisphere 123.3
2481 Female, age 94, left hemisphere 117.2
2288 Male, age 75, left hemisphere 92.1
Globus pallidus, externus
nTPM: 148.4
2646 Male, age 61, right hemisphere 187.2
2567 Female, age 72, unknown 162.0
1996 Male, age 80, right hemisphere 157.1
2395 Male, age 75, both hemispheres 118.5
2772 Female, age 79, unknown 116.9
Globus pallidus, internus
nTPM: 140.4
2037 Male, age 80, right hemisphere 164.6
1818 Male, age 74, unknown 147.4
2483 Female, age 94, right hemisphere 147.2
2778 Female, age 91, both hemispheres 144.1
2111 Female, age 85, right hemisphere 135.4
2566 Female, age 72, unknown 125.8
2287 Male, age 75, right hemisphere 118.7
Nucleus accumbens
nTPM: 108.4
2824 Male, age 61, right hemisphere 135.8
1783 Male, age 74, unknown 131.4
1856 Female, age 91, right hemisphere 113.9
1806 Female, age 85, left hemisphere 109.3
2698 Female, age 72, unknown 103.3
2391 Female, age 94, left hemisphere 96.1
2286 Male, age 75, left hemisphere 93.5
2732 Male, age 80, right hemisphere 84.3
Nucleus basalis of Meynert
nTPM: 141.2
2569 Male, age 61, both hemispheres 209.0
2484 Female, age 94, left hemisphere 135.1
2393 Male, age 80, right hemisphere 127.8
2821 Male, age 75, both hemispheres 93.0
Nucleus of the diagonal band
nTPM: 90.0
2029 Male, age 61, right hemisphere 108.3
1979 Male, age 74, unknown 91.8
1812 Female, age 91, both hemispheres 85.1
2195 Female, age 85, both hemispheres 82.5
2775 Male, age 80, right hemisphere 82.4
Putamen
nTPM: 143.0
1829 Male, age 74, unknown 168.1
2466 Female, age 79, unknown 162.0
2647 Male, age 75, left hemisphere 149.9
1838 Male, age 80, right hemisphere 145.7
2489 Female, age 72, unknown 144.7
2482 Female, age 94, left hemisphere 117.5
1937 Female, age 91, right hemisphere 113.1
Septal nuclei
nTPM: 87.3
2394 Male, age 61, left hemisphere 106.3
2199 Male, age 80, right hemisphere 105.4
2059 Female, age 85, both hemispheres 92.0
2031 Female, age 72, unknown 82.1
2009 Female, age 91, both hemispheres 78.1
2629 Female, age 94, right hemisphere 74.5
1960 Male, age 74, unknown 72.5
Stria terminalis, bed nucleus
nTPM: 73.2
2201 Male, age 74, unknown 79.1
2486 Female, age 94, both hemispheres 74.1
1974 Female, age 91, both hemispheres 66.4

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

57.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 52.0
Samples: 246

Max nTPM: 92.1
Min nTPM: 29.7
Std nTPM: 11.9
Median nTPM: 50.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 92.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 88.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 86.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 81.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 80.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 79.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 77.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 77.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 77.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 76.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 76.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 75.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 74.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 74.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 74.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 73.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 73.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 72.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 72.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 72.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 72.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 71.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 71.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 71.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 69.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 69.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 68.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 67.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 66.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 65.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 65.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 65.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 65.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 65.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 65.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 64.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 64.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 64.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 63.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 63.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 63.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 63.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 62.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 61.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 61.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 61.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 61.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 61.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 60.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 60.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 60.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 59.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 59.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 59.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 59.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 59.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 59.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 59.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 58.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 58.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 58.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 58.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 58.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 58.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 58.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 58.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 58.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 58.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 58.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 58.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 58.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 57.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 57.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 57.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 57.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 57.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 56.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 56.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 56.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 55.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 55.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 55.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 55.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 55.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 55.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 55.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 55.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 55.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 55.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 55.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 55.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 54.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 54.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 54.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 54.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 54.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 54.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 54.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 54.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 53.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 53.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 53.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 52.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 52.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 52.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 52.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 52.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 52.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 52.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 52.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 52.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 51.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 51.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 51.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 51.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 51.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 50.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 50.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 50.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 50.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 50.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 50.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 50.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 50.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 50.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 50.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 50.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 50.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 50.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 50.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 50.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 50.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 49.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 49.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 49.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 49.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 49.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 49.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 49.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 48.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 48.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 48.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 48.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 48.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 48.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 48.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 47.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 47.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 47.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 47.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 47.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 47.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 47.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 47.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 47.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 46.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 46.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 46.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 46.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 46.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 46.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 46.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 46.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 46.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 46.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 46.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 45.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 45.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 45.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 45.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 45.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 45.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 44.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 44.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 44.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 44.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 43.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 43.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 43.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 43.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 43.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 43.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 43.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 43.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 43.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 43.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 42.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 42.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 42.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 42.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 42.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 42.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 42.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 41.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 41.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 41.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 41.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 41.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 41.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 40.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 40.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 40.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 40.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 40.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 40.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 40.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 40.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 40.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 40.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 40.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 39.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 39.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 39.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 39.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 39.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 39.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 38.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 38.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 38.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 38.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 38.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 38.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 38.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 37.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 37.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 37.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 37.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 36.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 36.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 36.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 36.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 35.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 35.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 34.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 34.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 34.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 34.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 33.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 33.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 32.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 32.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 31.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 30.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 30.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 30.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 29.7
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 44.6
Samples: 246

Max nTPM: 118.5
Min nTPM: 18.2
Std nTPM: 11.6
Median nTPM: 43.4
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 118.5
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 84.8
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 73.0
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 71.9
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 71.1
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 69.8
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 69.7
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 69.2
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 68.0
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 66.8
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 66.5
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 66.3
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 63.6
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 63.4
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 63.3
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 63.3
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 63.3
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 62.5
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 62.2
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 61.9
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 61.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 61.4
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 61.4
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 61.3
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 60.6
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 60.0
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 59.2
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 59.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 58.1
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 57.8
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 56.7
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 56.4
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 55.8
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 55.7
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 55.7
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 55.6
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 55.4
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 54.7
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 54.6
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 53.9
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 53.9
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 53.6
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 53.5
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 53.4
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 53.3
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 52.8
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 52.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 52.3
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 52.1
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 51.9
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 51.8
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 51.8
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 51.6
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 51.4
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 51.3
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 51.3
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 50.7
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 49.9
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 49.9
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 49.7
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 49.4
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 49.2
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 49.2
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 49.1
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 48.8
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 48.7
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 48.6
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 48.6
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 48.5
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 48.4
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 48.4
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 48.3
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 48.3
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 48.1
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 48.0
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 47.9
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 47.8
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 47.5
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 47.5
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 47.3
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 47.3
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 47.3
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 47.2
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 47.2
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 47.1
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 47.1
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 47.1
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 47.0
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 47.0
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 46.9
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 46.8
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 46.7
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 46.7
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 46.6
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 46.6
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 46.4
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 46.3
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 45.9
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 45.9
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 45.7
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 45.6
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 45.6
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 45.6
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 45.6
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 45.5
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 45.5
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 45.5
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 45.4
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 44.9
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 44.8
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 44.8
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 44.6
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 44.5
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 44.4
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 44.3
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 44.3
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 44.2
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 44.1
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 43.8
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 43.7
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 43.7
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 43.7
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 43.6
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 43.2
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 43.2
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 43.2
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 43.2
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 42.9
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 42.7
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 42.6
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 42.6
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 42.4
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 42.2
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 42.1
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 42.1
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 41.9
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 41.9
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 41.9
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 41.8
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 41.8
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 41.7
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 41.6
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 41.5
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 41.4
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 41.3
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 41.2
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 41.0
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 41.0
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 40.9
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 40.9
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 40.9
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 40.8
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 40.6
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 40.5
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 40.5
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 40.5
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 40.4
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 40.2
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 40.2
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 40.1
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 40.1
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 40.0
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 40.0
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 39.8
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 39.7
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 39.6
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 39.3
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 38.7
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 38.6
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 38.3
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 38.3
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 38.2
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 38.2
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 38.1
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 38.1
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 37.9
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 37.5
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 37.5
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 37.5
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 37.4
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 37.4
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 37.4
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 37.3
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 37.1
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 37.1
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 37.1
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 37.0
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 36.9
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 36.7
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 36.0
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 35.8
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 35.7
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 35.5
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 35.4
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 35.4
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 35.3
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 35.2
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 35.2
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 35.1
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 35.1
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 35.0
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 34.8
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 34.7
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 34.5
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 34.5
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 34.4
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 34.2
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 34.0
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 34.0
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 32.9
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 32.9
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 32.7
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 32.6
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 32.5
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 32.5
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 32.5
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 32.2
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 32.2
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 32.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 31.9
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 31.7
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 31.5
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 31.5
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 31.4
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 31.2
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 30.7
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 30.5
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 30.3
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 30.3
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 30.1
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 30.0
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 29.6
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 29.3
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 29.3
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 28.7
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 28.7
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 28.1
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 27.9
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 27.7
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 27.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 27.5
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 25.8
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 25.4
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 24.7
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 21.5
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 18.2
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Brain - Putamen (basal ganglia)
Average nTPM: 57.4
Samples: 205

Max nTPM: 127.5
Min nTPM: 25.5
Std nTPM: 14.1
Median nTPM: 55.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 127.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 111.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 110.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 105.9
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 92.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 84.9
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 83.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 82.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 82.2
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 82.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 81.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 81.6
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 80.7
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 79.2
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 76.4
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 75.0
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 74.9
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 74.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 74.5
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 74.4
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 74.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 74.0
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 73.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 73.2
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 72.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 72.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 71.3
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 71.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 71.0
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 70.6
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 70.2
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 70.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 70.0
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 67.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 66.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 66.6
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 66.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 66.3
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 66.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 66.1
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 66.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 65.3
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 65.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 64.3
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 64.2
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 64.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 63.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 63.4
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 63.2
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 63.1
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 62.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 62.7
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 62.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 62.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 62.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 62.5
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 62.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 62.4
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 62.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 62.4
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 62.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 62.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 62.3
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 62.2
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 62.2
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 62.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 61.9
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 61.8
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 61.2
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 61.0
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 60.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 60.8
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 60.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 60.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 60.4
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 60.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 60.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 60.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 59.8
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 59.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 59.4
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 59.2
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 59.1
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 58.8
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 58.7
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 58.4
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 58.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 57.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 57.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 57.7
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 57.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 57.5
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 57.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 57.1
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 57.0
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 56.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 56.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 56.6
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 56.6
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 56.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 56.2
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 56.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 55.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 55.3
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 55.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 54.8
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 54.7
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 54.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 54.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 54.3
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 54.2
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 54.2
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 54.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 54.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 53.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 53.7
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 53.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 53.3
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 53.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 53.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 53.0
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 52.9
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 52.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 52.6
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 52.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 52.4
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 52.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 52.3
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 52.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 52.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 52.1
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 52.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 51.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 51.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 51.4
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 51.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 51.4
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 51.3
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 51.2
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 51.2
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 51.2
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 50.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 50.5
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 50.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 50.2
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 50.2
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 50.0
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 49.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 49.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 49.4
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 49.4
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 49.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 49.2
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 48.7
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 48.3
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 47.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 47.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 47.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 47.7
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 47.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 47.3
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 47.0
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 46.9
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 46.8
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 46.7
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 46.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 45.9
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 45.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 45.7
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 45.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 45.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 45.0
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 44.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 44.7
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 44.5
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 44.5
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 44.4
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 44.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 44.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 44.0
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 43.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 43.4
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 43.3
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 43.2
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 43.0
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 41.8
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 41.6
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 41.1
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 41.1
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 40.3
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 40.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 39.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 38.8
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 38.1
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 37.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 37.4
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 36.3
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 36.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 36.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 35.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 34.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 33.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 31.0
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 29.3
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 25.5
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

167.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 143.6
FF:10164-103B2 76 years, female 143.6
Nucleus accumbens
Scaled Tags Per Million: 145.0
FF:10037-101F1 23-56 years, mixed 145.0
Putamen
Scaled Tags Per Million: 145.0
FF:10176-103C5 60 years, female 145.0
Globus pallidus
Scaled Tags Per Million: 167.3
FF:10175-103C4 60 years, female 202.4
FF:10161-103A8 76 years, female 132.2

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

60.0
Pig sample Sample description nTPM
Caudate
nTPM: 47.0
Samples: 4

Max nTPM: 54.1
Min nTPM: 32.3
Sample A Female 32.3
Sample B Female 48.3
Sample C Male 54.1
Sample D Male 53.2
Putamen
nTPM: 60.0
Samples: 4

Max nTPM: 69.0
Min nTPM: 45.3
Sample A Female 45.3
Sample B Female 59.6
Sample C Male 66.2
Sample D Male 69.0
Septum
nTPM: 39.7
Samples: 4

Max nTPM: 55.0
Min nTPM: 28.8
Sample A Female 39.2
Sample B Female 35.9
Sample C Male 28.8
Sample D Male 55.0
Ventral pallidum
nTPM: 42.4
Samples: 4

Max nTPM: 48.5
Min nTPM: 33.8
Sample A Female 33.8
Sample B Female 48.5
Sample C Male 41.6
Sample D Male 45.6

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

151.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 151.0
Samples: 4

Max nTPM: 165.8
Min nTPM: 127.8
Sample A Male 165.0
Sample B Male 165.8
Sample C Female 127.8
Sample D Female 145.4
Septum
nTPM: 72.7
Samples: 4

Max nTPM: 79.2
Min nTPM: 63.7
Sample A Male 63.7
Sample B Male 79.2
Sample C Female 72.6
Sample D Female 75.1
Ventral forebrain
nTPM: 94.0
Samples: 4

Max nTPM: 102.9
Min nTPM: 85.2
Sample A Male 102.9
Sample B Male 85.2
Sample C Female 93.6
Sample D Female 94.1

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

8.8
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 8.8
70429423 Antisense, RP_050614_01_F05, Mouse strain C57BL/6J (56 days, male) 9.3
74988453 Antisense, RP_060315_05_D08, Mouse strain C57BL/6J (56 days, male) 8.3
Pallidum
Expression energy: 2.4
74988453 Antisense, RP_060315_05_D08, Mouse strain C57BL/6J (56 days, male) 2.5
70429423 Antisense, RP_050614_01_F05, Mouse strain C57BL/6J (56 days, male) 2.4

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