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RHBDF2
HPA
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  • RHBDF2
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

RHBDF2
Synonyms FLJ22341, iRhom2, RHBDL5, RHBDL6, TOC, TOCG
Gene descriptioni

Full gene name according to HGNC.

Rhomboid 5 homolog 2
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Enzymes
Potential drug targets
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane, Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 17
Cytoband q25.1
Chromosome location (bp) 76470891 - 76501790
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

14
Ensembl ENSG00000129667 (version 109)
Entrez gene 79651
HGNC HGNC:20788
UniProt Q6PJF5 (UniProt - Evidence at protein level)
neXtProt NX_Q6PJF5
GeneCards RHBDF2
Antibodypedia RHBDF2 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Regulates ADAM17 protease, a sheddase of the epidermal growth factor (EGF) receptor ligands and TNF, thereby plays a role in sleep, cell survival, proliferation, migration and inflammation. Does not exhibit any protease activity on its own.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Growth factor binding
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Protein transport, Transport
Gene summary (Entrez)i

Useful information about the gene from Entrez

Predicted to enable protein transporter activity. Predicted to be involved in negative regulation of protein secretion and regulation of epidermal growth factor receptor signaling pathway. Located in plasma membrane. Implicated in palmoplantar keratoderma-esophageal carcinoma syndrome. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
RHBDF2-201
ENSP00000322775
ENST00000313080
Q6PJF5
[Direct mapping] Inactive rhomboid protein 2
Show all
Enzymes
   Peptidases
   Serine-type peptidases
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   7TM proteins predicted by MDM
Disease related genes
Potential drug targets
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0002862 [negative regulation of inflammatory response to antigenic stimulus]
GO:0004252 [serine-type endopeptidase activity]
GO:0005515 [protein binding]
GO:0005783 [endoplasmic reticulum]
GO:0005789 [endoplasmic reticulum membrane]
GO:0005796 [Golgi lumen]
GO:0005886 [plasma membrane]
GO:0015031 [protein transport]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0019838 [growth factor binding]
GO:0042058 [regulation of epidermal growth factor receptor signaling pathway]
GO:0050708 [regulation of protein secretion]
GO:0050709 [negative regulation of protein secretion]
GO:0140318 [protein transporter activity]
Show all
856 aa
96.7 kDa
No 7
RHBDF2-202
ENSP00000466029
ENST00000585701
K7EQT5
[Direct mapping] Inactive rhomboid protein 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
47 aa
4.9 kDa
No 0
RHBDF2-203
ENSP00000465632
ENST00000585989
K7EKI1
[Direct mapping] Inactive rhomboid protein 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
112 aa
12.6 kDa
No 0
RHBDF2-205
ENSP00000467677
ENST00000589526
K7EQ53
[Direct mapping] Inactive rhomboid protein 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
89 aa
9.8 kDa
No 0
RHBDF2-208
ENSP00000465990
ENST00000590288
K7ELA9
[Direct mapping] Inactive rhomboid protein 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
26 aa
2.6 kDa
No 0
RHBDF2-209
ENSP00000464975
ENST00000590322
K7EJ10
[Direct mapping] Inactive rhomboid protein 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
28 aa
2.8 kDa
No 0
RHBDF2-210
ENSP00000467971
ENST00000591192
K7EQT5
[Direct mapping] Inactive rhomboid protein 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
47 aa
4.9 kDa
No 0
RHBDF2-211
ENSP00000465124
ENST00000591255
K7EJD6
[Direct mapping] Inactive rhomboid protein 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
13 aa
1.2 kDa
No 0
RHBDF2-212
ENSP00000464942
ENST00000591697
K7EIY3
[Direct mapping] Inactive rhomboid protein 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
74 aa
8.1 kDa
No 0
RHBDF2-213
ENSP00000467468
ENST00000591860
K7EPN8
[Direct mapping] Inactive rhomboid protein 2
Show all
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   2TM proteins predicted by MDM
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0004252 [serine-type endopeptidase activity]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
Show all
86 aa
9.6 kDa
No 2
RHBDF2-214
ENSP00000465531
ENST00000591879
K7EKA3
[Direct mapping] Inactive rhomboid protein 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
73 aa
8 kDa
No 0
RHBDF2-215
ENSP00000466867
ENST00000591885
Q6PJF5
[Direct mapping] Inactive rhomboid protein 2
Show all
Enzymes
   Peptidases
   Serine-type peptidases
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   7TM proteins predicted by MDM
Disease related genes
Potential drug targets
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0002862 [negative regulation of inflammatory response to antigenic stimulus]
GO:0004252 [serine-type endopeptidase activity]
GO:0005515 [protein binding]
GO:0005783 [endoplasmic reticulum]
GO:0005789 [endoplasmic reticulum membrane]
GO:0005796 [Golgi lumen]
GO:0005886 [plasma membrane]
GO:0015031 [protein transport]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0019838 [growth factor binding]
GO:0042058 [regulation of epidermal growth factor receptor signaling pathway]
GO:0050708 [regulation of protein secretion]
GO:0050709 [negative regulation of protein secretion]
GO:0140318 [protein transporter activity]
Show all
827 aa
93.4 kDa
No 7
RHBDF2-216
ENSP00000467549
ENST00000592123
K7EPV3
[Direct mapping] Inactive rhomboid protein 2
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005783 [endoplasmic reticulum]
GO:0005789 [endoplasmic reticulum membrane]
GO:0042058 [regulation of epidermal growth factor receptor signaling pathway]
GO:0050709 [negative regulation of protein secretion]
Show all
185 aa
20.9 kDa
No 0
RHBDF2-220
ENSP00000501790
ENST00000675367
Q6PJF5
[Direct mapping] Inactive rhomboid protein 2
Show all
Enzymes
   Peptidases
   Serine-type peptidases
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   7TM proteins predicted by MDM
Disease related genes
Potential drug targets
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0002862 [negative regulation of inflammatory response to antigenic stimulus]
GO:0004252 [serine-type endopeptidase activity]
GO:0005515 [protein binding]
GO:0005783 [endoplasmic reticulum]
GO:0005789 [endoplasmic reticulum membrane]
GO:0005796 [Golgi lumen]
GO:0005886 [plasma membrane]
GO:0015031 [protein transport]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0019838 [growth factor binding]
GO:0042058 [regulation of epidermal growth factor receptor signaling pathway]
GO:0050708 [regulation of protein secretion]
GO:0050709 [negative regulation of protein secretion]
GO:0072659 [protein localization to plasma membrane]
GO:0140318 [protein transporter activity]
GO:1904683 [regulation of metalloendopeptidase activity]
Show all
827 aa
93.4 kDa
No 7

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