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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:51.2 nTPM
HPA Brain:42.6 nTPM
GTEx:51.2 nTPM
FANTOM5:89.9 Scaled Tags Per Million
Mouse:92.8 nTPM
Allen mouse:1.0 Expression energy

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

42.6
Sample id Sample description nTPM
Caudate nucleus
nTPM: 39.1
1857 Female, age 85, left hemisphere 52.5
2846 Female, age 79, unknown 43.4
2290 Female, age 72, unknown 43.1
1854 Male, age 80, left hemisphere 41.7
1781 Male, age 74, unknown 41.5
2288 Male, age 75, left hemisphere 35.5
2289 Male, age 61, right hemisphere 32.9
2481 Female, age 94, left hemisphere 22.3
Globus pallidus, externus
nTPM: 12.7
2395 Male, age 75, both hemispheres 20.3
2646 Male, age 61, right hemisphere 14.0
2567 Female, age 72, unknown 12.6
2772 Female, age 79, unknown 9.4
1996 Male, age 80, right hemisphere 7.2
Globus pallidus, internus
nTPM: 12.6
2483 Female, age 94, right hemisphere 18.4
2287 Male, age 75, right hemisphere 17.3
2566 Female, age 72, unknown 14.0
2111 Female, age 85, right hemisphere 11.3
2778 Female, age 91, both hemispheres 10.7
2037 Male, age 80, right hemisphere 8.8
1818 Male, age 74, unknown 7.5
Nucleus accumbens
nTPM: 42.6
1856 Female, age 91, right hemisphere 63.0
1783 Male, age 74, unknown 56.1
2824 Male, age 61, right hemisphere 52.5
1806 Female, age 85, left hemisphere 51.3
2698 Female, age 72, unknown 39.4
2286 Male, age 75, left hemisphere 33.1
2391 Female, age 94, left hemisphere 23.2
2732 Male, age 80, right hemisphere 21.8
Nucleus basalis of Meynert
nTPM: 28.3
2393 Male, age 80, right hemisphere 35.4
2484 Female, age 94, left hemisphere 33.0
2821 Male, age 75, both hemispheres 30.2
2569 Male, age 61, both hemispheres 14.8
Nucleus of the diagonal band
nTPM: 31.4
1812 Female, age 91, both hemispheres 34.2
2195 Female, age 85, both hemispheres 32.6
2029 Male, age 61, right hemisphere 31.8
2775 Male, age 80, right hemisphere 30.2
1979 Male, age 74, unknown 28.4
Putamen
nTPM: 37.1
1838 Male, age 80, right hemisphere 51.9
1937 Female, age 91, right hemisphere 47.1
2466 Female, age 79, unknown 39.5
1829 Male, age 74, unknown 39.1
2647 Male, age 75, left hemisphere 28.5
2489 Female, age 72, unknown 27.2
2482 Female, age 94, left hemisphere 26.2
Septal nuclei
nTPM: 30.1
2394 Male, age 61, left hemisphere 37.6
2031 Female, age 72, unknown 36.9
1960 Male, age 74, unknown 36.1
2629 Female, age 94, right hemisphere 31.4
2009 Female, age 91, both hemispheres 27.2
2059 Female, age 85, both hemispheres 26.0
2199 Male, age 80, right hemisphere 15.6
Stria terminalis, bed nucleus
nTPM: 35.4
2201 Male, age 74, unknown 41.9
2486 Female, age 94, both hemispheres 35.0
1974 Female, age 91, both hemispheres 29.4

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

51.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 34.6
Samples: 246

Max nTPM: 117.5
Min nTPM: 1.2
Std nTPM: 22.8
Median nTPM: 33.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 117.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 99.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 91.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 87.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 82.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 81.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 81.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 78.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 77.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 77.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 76.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 75.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 75.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 74.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 73.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 73.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 72.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 72.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 70.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 70.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 68.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 68.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 67.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 66.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 66.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 65.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 64.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 63.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 63.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 62.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 62.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 61.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 61.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 61.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 60.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 60.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 60.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 60.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 59.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 59.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 59.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 59.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 57.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 57.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 56.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 55.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 55.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 54.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 54.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 54.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 54.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 54.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 53.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 52.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 52.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 51.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 51.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 51.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 51.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 50.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 50.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 49.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 49.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 49.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 48.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 48.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 48.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 48.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 48.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 48.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 48.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 47.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 47.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 47.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 47.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 47.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 46.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 46.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 45.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 45.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 44.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 44.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 43.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 43.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 43.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 43.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 43.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 42.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 42.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 41.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 41.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 41.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 41.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 40.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 40.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 40.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 40.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 39.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 39.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 39.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 39.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 38.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 38.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 38.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 38.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 38.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 37.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 37.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 37.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 36.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 36.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 36.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 36.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 36.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 36.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 36.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 35.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 35.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 35.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 35.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 33.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 33.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 33.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 33.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 33.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 33.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 32.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 30.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 30.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 30.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 30.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 29.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 29.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 29.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 29.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 28.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 28.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 28.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 27.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 27.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 27.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 26.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 26.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 25.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 25.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 25.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 24.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 24.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 24.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 24.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 24.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 23.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 23.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 23.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 23.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 23.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 23.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 23.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 23.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 23.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 22.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 21.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 21.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 21.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 21.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 21.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 21.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 20.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 20.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 19.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 19.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 18.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 18.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 18.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 17.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 17.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 16.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 15.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 15.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 15.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 15.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 14.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 14.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 14.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 14.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 13.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 13.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 13.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 13.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 13.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 13.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 13.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 12.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 12.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 11.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 11.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 11.0
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 10.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 10.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 10.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 9.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 9.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 9.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 9.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 9.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 9.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 8.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 8.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 8.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 8.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 8.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 8.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 8.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 7.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 7.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 7.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 7.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 7.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 7.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 7.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 6.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 6.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 6.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 6.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 6.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 6.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 5.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 5.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 5.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 4.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 4.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 4.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 4.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 4.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 3.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 3.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 3.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 3.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 3.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 3.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 2.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 2.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 2.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 2.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 2.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1.2
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 51.2
Samples: 246

Max nTPM: 148.2
Min nTPM: 2.9
Std nTPM: 26.3
Median nTPM: 53.9
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 148.2
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 105.8
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 99.6
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 98.4
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 98.2
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 97.7
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 97.2
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 95.7
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 92.5
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 91.9
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 91.8
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 91.8
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 91.5
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 91.0
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 87.4
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 86.9
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 86.7
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 86.2
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 86.1
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 85.1
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 84.5
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 84.1
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 83.2
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 82.8
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 82.7
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 82.7
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 82.3
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 81.0
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 80.6
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 80.4
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 80.3
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 80.2
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 80.0
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 79.5
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 79.5
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 79.4
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 79.2
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 79.0
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 78.2
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 77.9
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 77.8
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 77.6
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 77.4
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 76.8
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 75.8
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 75.4
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 75.2
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 74.0
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 73.8
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 73.0
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 72.6
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 72.1
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 72.1
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 72.1
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 72.1
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 71.8
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 71.8
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 71.4
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 71.2
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 71.1
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 71.0
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 70.8
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 70.2
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 70.1
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 69.8
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 69.0
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 68.9
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 68.7
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 68.7
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 68.6
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 68.6
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 67.8
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 67.5
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 67.4
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 67.3
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 66.9
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 66.6
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 66.4
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 66.3
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 65.7
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 65.6
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 65.1
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 64.8
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 64.6
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 63.9
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 63.9
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 63.5
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 63.4
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 63.1
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 63.0
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 62.9
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 62.9
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 62.8
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 62.7
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 62.7
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 62.3
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 62.3
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 62.1
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 61.8
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 61.8
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 61.7
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 61.7
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 60.9
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 60.6
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 60.3
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 60.0
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 59.8
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 59.7
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 59.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 59.7
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 59.3
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 59.3
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 58.4
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 57.9
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 57.2
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 57.0
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 56.4
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 55.0
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 54.8
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 54.4
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 54.4
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 54.0
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 53.9
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 53.9
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 53.7
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 53.4
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 52.9
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 52.6
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 52.6
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 51.9
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 50.6
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 50.5
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 50.4
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 50.2
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 50.2
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 49.6
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 49.5
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 49.5
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 49.3
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 49.0
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 48.9
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 48.4
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 48.4
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 48.2
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 48.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 48.1
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 48.0
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 47.8
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 47.5
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 47.0
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 47.0
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 46.4
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 45.6
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 45.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 45.1
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 44.9
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 44.7
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 44.6
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 44.0
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 43.2
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 43.1
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 41.9
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 41.7
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 41.3
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 40.6
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 40.1
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 39.7
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 39.5
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 39.4
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 38.2
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 37.8
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 37.4
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 37.1
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 36.8
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 36.4
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 36.2
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 35.4
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 35.0
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 34.0
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 33.8
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 33.5
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 33.0
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 33.0
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 31.1
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 31.1
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 30.5
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 30.0
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 28.9
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 28.2
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 27.7
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 25.9
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 25.9
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 25.3
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 24.5
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 24.2
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 24.2
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 23.4
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 23.4
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 23.3
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 23.2
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 21.5
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 21.4
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 20.8
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 18.8
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 16.4
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 15.6
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 15.5
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 15.4
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 15.4
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 14.3
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 14.3
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 14.0
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 13.8
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 13.7
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 13.4
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 13.1
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 12.6
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 12.6
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 12.6
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 12.2
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 11.9
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 11.8
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 11.3
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 11.2
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 10.5
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 10.4
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 10.4
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 10.1
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 9.7
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 9.4
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 9.4
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 8.4
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 8.2
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 8.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 7.4
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 7.4
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 7.0
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 6.9
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 6.8
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 5.7
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 5.5
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 5.4
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 4.8
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 4.7
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 3.0
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 2.9
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Brain - Putamen (basal ganglia)
Average nTPM: 30.8
Samples: 205

Max nTPM: 95.5
Min nTPM: 0.9
Std nTPM: 22.3
Median nTPM: 25.3
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 95.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 88.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 87.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 80.7
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 79.8
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 77.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 73.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 73.6
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 73.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 71.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 71.2
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 70.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 69.5
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 68.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 66.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 66.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 66.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 65.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 65.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 63.3
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 62.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 62.3
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 62.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 59.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 59.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 59.7
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 59.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 59.1
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 58.7
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 57.3
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 57.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 57.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 56.7
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 56.2
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 55.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 55.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 55.6
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 55.6
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 54.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 54.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 54.0
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 53.6
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 53.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 52.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 52.3
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 51.1
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 50.1
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 49.6
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 48.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 47.6
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 47.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 46.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 46.5
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 45.4
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 45.0
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 44.3
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 44.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 44.0
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 43.6
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 43.6
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 43.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 42.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 42.6
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 42.1
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 41.1
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 40.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 40.7
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 40.4
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 40.4
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 40.2
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 39.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 39.1
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 38.1
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 37.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 37.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 36.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 36.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 36.2
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 34.9
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 34.9
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 34.2
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 33.8
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 33.5
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 32.9
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 32.3
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 31.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 31.6
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 31.5
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 31.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 31.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 31.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 31.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 30.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 29.9
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 29.8
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 29.1
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 27.9
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 27.8
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 27.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 27.3
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 26.9
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 26.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 25.3
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 25.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 25.1
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 25.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 24.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 24.1
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 24.1
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 23.9
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 23.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 23.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 23.4
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 23.4
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 23.3
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 23.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 23.1
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 22.3
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 22.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 21.9
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 21.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 21.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 21.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 20.4
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 20.4
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 19.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 18.4
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 18.3
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 17.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 17.0
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 16.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 16.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 16.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 15.9
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 15.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 15.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 15.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 15.3
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 14.8
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 14.7
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 14.7
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 14.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 14.2
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 14.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 14.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 13.9
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 13.8
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 13.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 13.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 12.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 12.0
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 12.0
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 11.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 11.9
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 11.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 11.2
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 11.0
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 10.4
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 10.0
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 9.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 9.7
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 9.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 9.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 8.7
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 8.6
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 8.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 8.5
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 7.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 7.7
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 7.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 7.7
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 7.6
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 7.5
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 7.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 6.9
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 6.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 6.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 6.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 6.0
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 5.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 5.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 5.2
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 5.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 5.0
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 4.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 4.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 4.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 3.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 3.6
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 3.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 3.5
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 3.2
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 2.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 2.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 2.8
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 2.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 2.5
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 2.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 2.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 2.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 1.6
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 1.5
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 1.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 1.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 0.9
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

89.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 81.3
FF:10164-103B2 76 years, female 81.3
Nucleus accumbens
Scaled Tags Per Million: 60.4
FF:10037-101F1 23-56 years, mixed 60.4
Putamen
Scaled Tags Per Million: 89.9
FF:10176-103C5 60 years, female 89.9
Globus pallidus
Scaled Tags Per Million: 15.3
FF:10175-103C4 60 years, female 21.9
FF:10161-103A8 76 years, female 8.7

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

92.8
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 92.8
Samples: 4

Max nTPM: 108.6
Min nTPM: 79.7
Sample A Male 84.4
Sample B Male 79.7
Sample C Female 98.4
Sample D Female 108.6
Septum
nTPM: 49.9
Samples: 4

Max nTPM: 71.7
Min nTPM: 34.6
Sample A Male 71.7
Sample B Male 34.6
Sample C Female 54.6
Sample D Female 38.7
Ventral forebrain
nTPM: 82.1
Samples: 4

Max nTPM: 85.4
Min nTPM: 76.6
Sample A Male 85.4
Sample B Male 76.6
Sample C Female 84.5
Sample D Female 82.0

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.0
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 1.0
427 Antisense, RP_Baylor_253907, Mouse strain C57BL/6J (56 days, male) 1.0
428 Antisense, RP_Baylor_253907, Mouse strain C57BL/6J (56 days, male) 0.5
Pallidum
Expression energy: 1.0
427 Antisense, RP_Baylor_253907, Mouse strain C57BL/6J (56 days, male) 1.0
428 Antisense, RP_Baylor_253907, Mouse strain C57BL/6J (56 days, male) 0.2

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