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FGF13
HPA
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  • FGF13
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

FGF13
Synonyms FGF2, FHF2, FLJ30672, LINC00889
Gene descriptioni

Full gene name according to HGNC.

Fibroblast growth factor 13
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Human disease related genes
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome X
Cytoband
Chromosome location (bp) 138614727 - 139222777
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

8
Ensembl ENSG00000129682 (version 109)
Entrez gene 2258
HGNC HGNC:3670
UniProt Q92913 (UniProt - Evidence at protein level)
neXtProt NX_Q92913
GeneCards FGF13
Antibodypedia FGF13 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Microtubule-binding protein which directly binds tubulin and is involved in both polymerization and stabilization of microtubules (By similarity). Through its action on microtubules, may participate in the refinement of axons by negatively regulating axonal and leading processes branching (By similarity). Plays a crucial role in neuron polarization and migration in the cerebral cortex and the hippocampus (By similarity). Regulates voltage-gated sodium channel transport and function 1, 2, 3. May also play a role in MAPK signaling (By similarity). Required for the development of axonal initial segment-targeting inhibitory GABAergic synapses made by chandelier neurons (By similarity).... show less
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Neurogenesis
Gene summary (Entrez)i

Useful information about the gene from Entrez

The protein encoded by this gene is a member of the fibroblast growth factor (FGF) family. FGF family members possess broad mitogenic and cell survival activities, and are involved in a variety of biological processes, including embryonic development, cell growth, morphogenesis, tissue repair, tumor growth, and invasion. This gene is located in a region on chromosome X, which is associated with Borjeson-Forssman-Lehmann syndrome (BFLS), making it a possible candidate gene for familial cases of the BFLS, and for other syndromal and nonspecific forms of X-linked cognitive disability mapping to this region. Alternative splicing of this gene at the 5' end results in several transcript variants encoding different isoforms with different N-termini. [provided by RefSeq, Nov 2008]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
FGF13-201
ENSP00000303391
ENST00000305414
Q92913
[Direct mapping] Fibroblast growth factor 13
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Nervous system diseases
   Epilepsy
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Show all
GO:0000165 [MAPK cascade]
GO:0001764 [neuron migration]
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0005874 [microtubule]
GO:0005886 [plasma membrane]
GO:0006814 [sodium ion transport]
GO:0007026 [negative regulation of microtubule depolymerization]
GO:0007165 [signal transduction]
GO:0007267 [cell-cell signaling]
GO:0007399 [nervous system development]
GO:0007612 [learning]
GO:0007613 [memory]
GO:0008017 [microtubule binding]
GO:0008083 [growth factor activity]
GO:0014704 [intercalated disc]
GO:0016020 [membrane]
GO:0016328 [lateral plasma membrane]
GO:0017080 [sodium channel regulator activity]
GO:0021766 [hippocampus development]
GO:0021795 [cerebral cortex cell migration]
GO:0030175 [filopodium]
GO:0030424 [axon]
GO:0030425 [dendrite]
GO:0030426 [growth cone]
GO:0042383 [sarcolemma]
GO:0042995 [cell projection]
GO:0043005 [neuron projection]
GO:0044325 [transmembrane transporter binding]
GO:0045200 [establishment of neuroblast polarity]
GO:0046785 [microtubule polymerization]
GO:0048487 [beta-tubulin binding]
GO:0048671 [negative regulation of collateral sprouting]
GO:0072659 [protein localization to plasma membrane]
GO:0098909 [regulation of cardiac muscle cell action potential involved in regulation of contraction]
GO:1904862 [inhibitory synapse assembly]
GO:1905150 [regulation of voltage-gated sodium channel activity]
Show all
192 aa
21.6 kDa
No 0
FGF13-202
ENSP00000322390
ENST00000315930
Q92913
[Direct mapping] Fibroblast growth factor 13
Show all
A8K1P5
[Target identity:100%; Query identity:100%] Fibroblast growth factor
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Nervous system diseases
   Epilepsy
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Show all
GO:0000165 [MAPK cascade]
GO:0001764 [neuron migration]
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0005874 [microtubule]
GO:0005886 [plasma membrane]
GO:0006814 [sodium ion transport]
GO:0007026 [negative regulation of microtubule depolymerization]
GO:0007165 [signal transduction]
GO:0007267 [cell-cell signaling]
GO:0007399 [nervous system development]
GO:0007611 [learning or memory]
GO:0007612 [learning]
GO:0007613 [memory]
GO:0008017 [microtubule binding]
GO:0008083 [growth factor activity]
GO:0014704 [intercalated disc]
GO:0016020 [membrane]
GO:0016328 [lateral plasma membrane]
GO:0017080 [sodium channel regulator activity]
GO:0021766 [hippocampus development]
GO:0021795 [cerebral cortex cell migration]
GO:0022008 [neurogenesis]
GO:0030175 [filopodium]
GO:0030424 [axon]
GO:0030425 [dendrite]
GO:0030426 [growth cone]
GO:0042383 [sarcolemma]
GO:0042995 [cell projection]
GO:0043005 [neuron projection]
GO:0044325 [transmembrane transporter binding]
GO:0045200 [establishment of neuroblast polarity]
GO:0046785 [microtubule polymerization]
GO:0048487 [beta-tubulin binding]
GO:0048671 [negative regulation of collateral sprouting]
GO:0048755 [branching morphogenesis of a nerve]
GO:0072659 [protein localization to plasma membrane]
GO:0098909 [regulation of cardiac muscle cell action potential involved in regulation of contraction]
GO:1904862 [inhibitory synapse assembly]
GO:1905150 [regulation of voltage-gated sodium channel activity]
Show all
245 aa
27.6 kDa
No 0
FGF13-203
ENSP00000388688
ENST00000421460
A0A0C4DG13
[Direct mapping] Fibroblast growth factor 13
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Nervous system diseases
   Epilepsy
Show all
GO:0005576 [extracellular region]
GO:0005737 [cytoplasm]
GO:0008083 [growth factor activity]
Show all
43 aa
5.1 kDa
No 0
FGF13-204
ENSP00000396198
ENST00000436198
Q92913
[Direct mapping] Fibroblast growth factor 13
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Nervous system diseases
   Epilepsy
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Show all
GO:0000165 [MAPK cascade]
GO:0001764 [neuron migration]
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0005874 [microtubule]
GO:0005886 [plasma membrane]
GO:0006814 [sodium ion transport]
GO:0007026 [negative regulation of microtubule depolymerization]
GO:0007165 [signal transduction]
GO:0007267 [cell-cell signaling]
GO:0007399 [nervous system development]
GO:0007612 [learning]
GO:0007613 [memory]
GO:0008017 [microtubule binding]
GO:0008083 [growth factor activity]
GO:0014704 [intercalated disc]
GO:0016020 [membrane]
GO:0016328 [lateral plasma membrane]
GO:0017080 [sodium channel regulator activity]
GO:0021766 [hippocampus development]
GO:0021795 [cerebral cortex cell migration]
GO:0030175 [filopodium]
GO:0030424 [axon]
GO:0030425 [dendrite]
GO:0030426 [growth cone]
GO:0042383 [sarcolemma]
GO:0042995 [cell projection]
GO:0043005 [neuron projection]
GO:0044325 [transmembrane transporter binding]
GO:0045200 [establishment of neuroblast polarity]
GO:0046785 [microtubule polymerization]
GO:0048487 [beta-tubulin binding]
GO:0048671 [negative regulation of collateral sprouting]
GO:0072659 [protein localization to plasma membrane]
GO:0098909 [regulation of cardiac muscle cell action potential involved in regulation of contraction]
GO:1904862 [inhibitory synapse assembly]
GO:1905150 [regulation of voltage-gated sodium channel activity]
Show all
255 aa
28.8 kDa
No 0
FGF13-205
ENSP00000409276
ENST00000441825
Q92913
[Direct mapping] Fibroblast growth factor 13
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Nervous system diseases
   Epilepsy
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Show all
GO:0000165 [MAPK cascade]
GO:0001764 [neuron migration]
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0005874 [microtubule]
GO:0005886 [plasma membrane]
GO:0006814 [sodium ion transport]
GO:0007026 [negative regulation of microtubule depolymerization]
GO:0007165 [signal transduction]
GO:0007267 [cell-cell signaling]
GO:0007399 [nervous system development]
GO:0007612 [learning]
GO:0007613 [memory]
GO:0008017 [microtubule binding]
GO:0008083 [growth factor activity]
GO:0014704 [intercalated disc]
GO:0016020 [membrane]
GO:0016328 [lateral plasma membrane]
GO:0017080 [sodium channel regulator activity]
GO:0021766 [hippocampus development]
GO:0021795 [cerebral cortex cell migration]
GO:0030175 [filopodium]
GO:0030424 [axon]
GO:0030425 [dendrite]
GO:0030426 [growth cone]
GO:0042383 [sarcolemma]
GO:0042995 [cell projection]
GO:0043005 [neuron projection]
GO:0044325 [transmembrane transporter binding]
GO:0045200 [establishment of neuroblast polarity]
GO:0046785 [microtubule polymerization]
GO:0048487 [beta-tubulin binding]
GO:0048671 [negative regulation of collateral sprouting]
GO:0072659 [protein localization to plasma membrane]
GO:0098909 [regulation of cardiac muscle cell action potential involved in regulation of contraction]
GO:1904862 [inhibitory synapse assembly]
GO:1905150 [regulation of voltage-gated sodium channel activity]
Show all
226 aa
25.6 kDa
No 0
FGF13-206
ENSP00000411999
ENST00000448673
B1B1H9
[Direct mapping] Fibroblast growth factor 13
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Nervous system diseases
   Epilepsy
Show all
GO:0005576 [extracellular region]
GO:0005737 [cytoplasm]
GO:0008083 [growth factor activity]
Show all
98 aa
11.2 kDa
No 0
FGF13-207
ENSP00000406916
ENST00000455663
B1AJW0
[Direct mapping] Fibroblast growth factor
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Human disease related genes
   Nervous system diseases
   Epilepsy
Show all
GO:0005576 [extracellular region]
GO:0005737 [cytoplasm]
GO:0005874 [microtubule]
GO:0005886 [plasma membrane]
GO:0007165 [signal transduction]
GO:0007399 [nervous system development]
GO:0008083 [growth factor activity]
GO:0016020 [membrane]
GO:0030175 [filopodium]
GO:0030425 [dendrite]
GO:0030426 [growth cone]
GO:0042383 [sarcolemma]
GO:0042995 [cell projection]
Show all
206 aa
23.6 kDa
No 0
FGF13-208
ENSP00000487411
ENST00000626909
Q92913
[Direct mapping] Fibroblast growth factor 13
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Disease related genes
Human disease related genes
   Nervous system diseases
   Epilepsy
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Show all
GO:0000165 [MAPK cascade]
GO:0001764 [neuron migration]
GO:0005515 [protein binding]
GO:0005576 [extracellular region]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0005874 [microtubule]
GO:0005886 [plasma membrane]
GO:0006814 [sodium ion transport]
GO:0007026 [negative regulation of microtubule depolymerization]
GO:0007165 [signal transduction]
GO:0007267 [cell-cell signaling]
GO:0007399 [nervous system development]
GO:0007612 [learning]
GO:0007613 [memory]
GO:0008017 [microtubule binding]
GO:0008083 [growth factor activity]
GO:0014704 [intercalated disc]
GO:0016020 [membrane]
GO:0016328 [lateral plasma membrane]
GO:0017080 [sodium channel regulator activity]
GO:0021766 [hippocampus development]
GO:0021795 [cerebral cortex cell migration]
GO:0030175 [filopodium]
GO:0030424 [axon]
GO:0030425 [dendrite]
GO:0030426 [growth cone]
GO:0042383 [sarcolemma]
GO:0042995 [cell projection]
GO:0043005 [neuron projection]
GO:0044325 [transmembrane transporter binding]
GO:0045200 [establishment of neuroblast polarity]
GO:0046785 [microtubule polymerization]
GO:0048487 [beta-tubulin binding]
GO:0048671 [negative regulation of collateral sprouting]
GO:0072659 [protein localization to plasma membrane]
GO:0098909 [regulation of cardiac muscle cell action potential involved in regulation of contraction]
GO:1904862 [inhibitory synapse assembly]
GO:1905150 [regulation of voltage-gated sodium channel activity]
Show all
199 aa
22.3 kDa
No 0

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