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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:100.1 nTPM
HPA Brain:111.6 nTPM
GTEx:100.1 nTPM
FANTOM5:155.5 Scaled Tags Per Million
Pig:130.8 nTPM
Mouse:273.6 nTPM
Allen mouse:0.1 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA078390
Glial cells Low
Neuronal cells Not detected



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

111.6
Sample id Sample description nTPM
Caudate nucleus
nTPM: 111.3
1857 Female, age 85, left hemisphere 135.3
2290 Female, age 72, unknown 129.1
2288 Male, age 75, left hemisphere 121.3
2846 Female, age 79, unknown 121.1
1854 Male, age 80, left hemisphere 117.2
1781 Male, age 74, unknown 115.1
2289 Male, age 61, right hemisphere 98.8
2481 Female, age 94, left hemisphere 52.9
Globus pallidus, externus
nTPM: 17.0
2395 Male, age 75, both hemispheres 21.1
2646 Male, age 61, right hemisphere 19.8
2567 Female, age 72, unknown 15.9
1996 Male, age 80, right hemisphere 14.7
2772 Female, age 79, unknown 13.6
Globus pallidus, internus
nTPM: 15.3
2483 Female, age 94, right hemisphere 35.7
2566 Female, age 72, unknown 17.2
1818 Male, age 74, unknown 15.7
2037 Male, age 80, right hemisphere 11.5
2287 Male, age 75, right hemisphere 10.9
2778 Female, age 91, both hemispheres 9.0
2111 Female, age 85, right hemisphere 7.4
Nucleus accumbens
nTPM: 104.6
1856 Female, age 91, right hemisphere 173.7
1783 Male, age 74, unknown 141.5
1806 Female, age 85, left hemisphere 120.7
2286 Male, age 75, left hemisphere 114.1
2824 Male, age 61, right hemisphere 102.5
2698 Female, age 72, unknown 92.8
2391 Female, age 94, left hemisphere 50.0
2732 Male, age 80, right hemisphere 41.7
Nucleus basalis of Meynert
nTPM: 70.4
2484 Female, age 94, left hemisphere 90.1
2393 Male, age 80, right hemisphere 83.2
2821 Male, age 75, both hemispheres 83.1
2569 Male, age 61, both hemispheres 25.0
Nucleus of the diagonal band
nTPM: 101.8
1812 Female, age 91, both hemispheres 109.5
2029 Male, age 61, right hemisphere 108.7
2775 Male, age 80, right hemisphere 107.4
2195 Female, age 85, both hemispheres 106.4
1979 Male, age 74, unknown 77.1
Putamen
nTPM: 111.6
1937 Female, age 91, right hemisphere 163.3
1829 Male, age 74, unknown 134.1
1838 Male, age 80, right hemisphere 128.2
2466 Female, age 79, unknown 114.1
2647 Male, age 75, left hemisphere 84.7
2489 Female, age 72, unknown 81.2
2482 Female, age 94, left hemisphere 75.3
Septal nuclei
nTPM: 83.9
2629 Female, age 94, right hemisphere 124.2
1960 Male, age 74, unknown 114.2
2031 Female, age 72, unknown 103.4
2009 Female, age 91, both hemispheres 91.7
2059 Female, age 85, both hemispheres 70.3
2394 Male, age 61, left hemisphere 44.8
2199 Male, age 80, right hemisphere 38.8
Stria terminalis, bed nucleus
nTPM: 100.0
1974 Female, age 91, both hemispheres 126.0
2486 Female, age 94, both hemispheres 109.5
2201 Male, age 74, unknown 64.5

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

100.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 100.1
Samples: 246

Max nTPM: 255.1
Min nTPM: 5.2
Std nTPM: 53.9
Median nTPM: 103.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 255.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 243.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 235.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 221.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 210.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 204.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 204.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 192.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 190.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 187.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 185.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 185.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 184.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 184.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 183.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 181.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 181.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 176.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 176.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 174.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 174.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 173.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 171.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 171.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 168.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 167.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 167.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 166.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 161.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 160.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 160.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 158.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 157.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 156.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 156.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 156.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 155.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 155.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 154.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 154.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 154.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 154.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 153.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 153.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 153.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 152.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 152.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 152.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 151.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 151.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 149.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 148.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 147.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 146.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 146.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 146.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 145.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 145.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 145.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 145.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 143.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 142.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 142.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 140.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 139.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 139.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 138.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 136.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 135.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 135.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 135.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 134.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 134.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 133.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 131.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 129.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 128.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 126.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 126.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 126.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 125.1
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 124.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 123.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 121.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 121.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 120.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 120.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 120.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 119.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 118.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 118.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 118.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 118.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 117.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 117.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 116.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 114.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 114.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 114.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 114.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 113.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 112.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 111.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 111.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 111.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 110.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 110.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 109.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 109.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 109.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 108.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 108.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 108.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 107.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 107.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 107.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 106.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 105.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 104.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 104.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 104.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 104.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 103.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 103.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 102.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 101.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 101.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 101.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 100.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 100.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 98.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 97.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 96.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 96.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 95.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 95.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 95.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 94.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 94.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 94.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 93.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 93.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 92.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 92.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 90.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 89.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 88.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 88.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 87.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 86.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 85.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 85.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 84.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 83.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 81.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 80.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 80.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 80.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 79.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 78.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 78.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 78.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 78.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 77.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 76.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 75.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 74.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 74.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 73.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 73.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 72.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 70.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 70.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 64.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 62.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 58.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 58.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 57.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 57.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 57.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 56.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 56.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 55.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 54.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 54.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 52.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 52.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 51.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 51.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 50.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 50.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 49.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 46.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 46.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 43.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 42.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 41.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 41.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 41.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 38.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 38.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 37.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 37.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 36.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 36.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 35.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 35.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 35.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 34.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 33.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 32.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 31.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 31.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 31.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 31.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 30.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 29.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 29.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 28.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 28.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 27.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 26.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 25.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 24.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 24.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 22.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 21.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 21.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 20.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 20.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 19.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 17.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 16.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 16.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 16.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 15.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 14.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 13.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 11.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 9.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 8.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 8.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 7.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 7.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 6.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 5.2
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 96.1
Samples: 246

Max nTPM: 233.6
Min nTPM: 3.6
Std nTPM: 48.7
Median nTPM: 99.2
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 233.6
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 214.4
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 207.0
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 195.4
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 195.1
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 193.4
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 182.4
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 180.5
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 179.8
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 178.7
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 176.5
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 175.1
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 172.7
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 172.2
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 171.7
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 169.3
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 168.8
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 168.2
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 165.4
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 162.2
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 160.0
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 159.3
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 159.2
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 156.6
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 156.1
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 156.0
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 155.9
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 153.7
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 153.7
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 153.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 152.3
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 150.8
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 150.2
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 149.6
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 149.3
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 148.6
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 148.2
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 147.1
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 146.1
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 146.1
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 144.6
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 143.8
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 143.7
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 143.1
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 142.8
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 141.6
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 139.8
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 139.2
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 139.0
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 138.8
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 138.6
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 138.1
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 137.9
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 136.9
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 136.5
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 135.8
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 135.5
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 134.0
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 132.5
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 131.9
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 130.5
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 130.2
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 129.6
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 129.3
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 129.2
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 128.9
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 128.6
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 128.4
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 128.2
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 127.5
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 127.3
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 126.7
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 126.5
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 125.4
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 125.3
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 125.2
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 125.0
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 123.5
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 122.2
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 122.1
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 121.7
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 121.5
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 121.5
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 121.0
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 120.1
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 119.9
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 116.3
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 116.0
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 116.0
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 116.0
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 115.8
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 115.6
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 115.3
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 115.0
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 114.9
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 114.4
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 114.1
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 114.1
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 113.3
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 112.7
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 112.0
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 111.4
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 111.0
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 110.6
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 109.9
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 109.2
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 108.9
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 108.9
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 107.7
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 106.4
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 105.8
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 105.0
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 104.9
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 104.5
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 104.1
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 102.8
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 101.8
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 101.5
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 101.2
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 101.1
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 100.5
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 99.8
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 99.3
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 99.2
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 98.9
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 98.6
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 98.3
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 96.3
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 96.1
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 95.2
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 95.1
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 94.9
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 94.6
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 94.3
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 93.5
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 92.3
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 91.9
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 91.4
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 90.7
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 90.4
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 90.0
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 87.9
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 87.1
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 85.6
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 84.2
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 84.1
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 83.1
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 83.0
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 82.4
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 81.5
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 81.2
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 80.7
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 80.5
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 78.8
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 78.7
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 78.5
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 78.4
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 77.1
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 76.8
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 76.6
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 76.6
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 75.6
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 75.4
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 74.7
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 74.3
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 72.5
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 71.8
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 70.8
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 69.5
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 68.9
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 67.6
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 67.3
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 67.2
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 66.9
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 66.2
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 65.5
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 63.6
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 62.4
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 61.9
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 61.1
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 57.9
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 57.6
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 57.5
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 57.1
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 57.0
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 56.7
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 55.4
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 55.2
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 54.8
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 54.4
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 54.1
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 54.1
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 53.2
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 52.7
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 52.6
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 51.0
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 48.4
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 48.1
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 47.2
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 46.7
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 45.6
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 44.7
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 44.3
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 42.6
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 41.5
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 41.5
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 41.0
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 38.1
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 35.9
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 35.8
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 35.6
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 33.6
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 30.8
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 30.4
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 30.3
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 30.2
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 29.2
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 29.0
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 28.7
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 28.3
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 27.5
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 24.8
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 24.8
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 24.1
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 23.9
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 23.2
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 21.6
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 21.0
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 20.5
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 19.8
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 19.1
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 18.2
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 17.8
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 16.4
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 15.5
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 15.4
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 15.0
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 13.8
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 12.8
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 11.6
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 9.6
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 9.5
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 7.9
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 4.8
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 4.5
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 3.6
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Brain - Putamen (basal ganglia)
Average nTPM: 93.0
Samples: 205

Max nTPM: 301.6
Min nTPM: 2.0
Std nTPM: 55.7
Median nTPM: 95.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 301.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 200.7
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 193.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 192.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 192.5
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 192.4
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 192.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 192.0
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 190.3
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 184.8
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 183.8
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 179.3
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 173.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 172.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 172.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 171.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 170.4
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 167.6
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 166.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 164.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 164.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 164.1
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 161.6
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 161.2
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 158.1
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 157.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 156.8
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 156.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 155.9
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 155.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 154.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 154.0
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 150.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 150.4
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 149.6
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 148.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 148.7
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 148.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 147.8
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 146.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 145.8
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 145.7
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 145.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 143.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 143.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 142.3
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 141.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 140.4
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 139.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 138.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 137.3
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 134.8
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 133.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 133.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 133.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 131.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 130.7
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 128.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 128.2
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 127.5
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 126.9
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 126.7
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 126.4
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 126.3
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 125.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 124.4
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 124.1
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 123.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 121.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 121.3
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 118.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 117.5
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 117.5
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 116.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 115.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 115.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 115.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 113.1
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 112.0
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 111.9
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 111.2
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 110.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 109.0
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 108.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 107.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 107.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 106.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 106.7
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 106.5
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 105.4
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 105.2
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 105.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 104.8
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 104.5
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 103.6
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 102.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 100.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 99.9
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 97.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 96.5
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 96.5
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 96.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 95.9
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 95.1
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 91.8
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 91.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 91.3
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 90.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 90.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 88.7
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 88.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 87.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 87.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 87.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 86.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 86.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 81.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 81.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 81.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 80.8
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 80.7
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 79.2
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 79.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 78.9
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 76.2
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 75.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 75.2
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 73.8
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 73.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 73.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 71.2
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 69.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 68.3
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 67.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 66.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 66.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 65.4
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 64.7
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 63.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 62.9
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 62.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 58.4
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 56.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 56.3
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 54.3
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 46.4
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 46.3
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 45.5
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 45.3
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 44.0
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 43.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 43.6
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 43.2
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 42.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 42.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 42.8
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 42.6
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 40.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 40.5
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 37.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 37.0
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 35.6
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 34.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 33.6
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 32.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 31.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 30.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 29.9
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 29.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 27.9
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 27.8
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 26.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 25.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 25.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 21.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 21.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 21.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 21.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 21.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 20.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 20.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 20.6
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 20.6
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 18.3
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 18.3
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 16.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 16.3
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 16.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 14.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 12.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 11.3
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 10.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 9.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 9.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 9.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 8.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 6.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 6.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 6.7
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 6.5
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 6.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 5.1
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 5.0
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 2.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 2.0
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

155.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 87.0
FF:10164-103B2 76 years, female 87.0
Nucleus accumbens
Scaled Tags Per Million: 152.6
FF:10037-101F1 23-56 years, mixed 152.6
Putamen
Scaled Tags Per Million: 155.5
FF:10176-103C5 60 years, female 155.5
Globus pallidus
Scaled Tags Per Million: 32.5
FF:10175-103C4 60 years, female 54.1
FF:10161-103A8 76 years, female 10.9

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

130.8
Pig sample Sample description nTPM
Caudate
nTPM: 130.8
Samples: 4

Max nTPM: 149.4
Min nTPM: 111.8
Sample A Female 115.5
Sample B Female 146.5
Sample C Male 149.4
Sample D Male 111.8
Putamen
nTPM: 84.9
Samples: 4

Max nTPM: 106.4
Min nTPM: 50.3
Sample A Female 50.3
Sample B Female 82.3
Sample C Male 100.6
Sample D Male 106.4
Septum
nTPM: 113.2
Samples: 4

Max nTPM: 134.1
Min nTPM: 83.2
Sample A Female 134.1
Sample B Female 112.5
Sample C Male 123.1
Sample D Male 83.2
Ventral pallidum
nTPM: 105.0
Samples: 4

Max nTPM: 132.5
Min nTPM: 92.5
Sample A Female 132.5
Sample B Female 93.5
Sample C Male 92.5
Sample D Male 101.6

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

273.6
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 171.0
Samples: 4

Max nTPM: 196.9
Min nTPM: 146.7
Sample A Male 182.2
Sample B Male 196.9
Sample C Female 146.7
Sample D Female 158.3
Septum
nTPM: 273.6
Samples: 4

Max nTPM: 312.5
Min nTPM: 231.5
Sample A Male 272.1
Sample B Male 312.5
Sample C Female 278.3
Sample D Female 231.5
Ventral forebrain
nTPM: 233.6
Samples: 4

Max nTPM: 293.8
Min nTPM: 204.5
Sample A Male 229.8
Sample B Male 204.5
Sample C Female 293.8
Sample D Female 206.4

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.1
1029 Antisense, RP_Baylor_103190, Mouse strain C57BL/6J (56 days, male) 0.3
1030 Antisense, RP_Baylor_103190, Mouse strain C57BL/6J (56 days, male) 0.1
1031 Sense, RPS_Baylor_37076, Mouse strain C57BL/6J (56 days, male) 0.0
Pallidum
Expression energy: 0.0
1029 Antisense, RP_Baylor_103190, Mouse strain C57BL/6J (56 days, male) 0.1
1030 Antisense, RP_Baylor_103190, Mouse strain C57BL/6J (56 days, male) 0.1
1031 Sense, RPS_Baylor_37076, Mouse strain C57BL/6J (56 days, male) 0.0

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