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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:10.1 nTPM
HPA Brain:33.9 nTPM
GTEx:10.1 nTPM
FANTOM5:7.5 Scaled Tags Per Million
Pig:12.1 nTPM
Mouse:11.7 nTPM
Allen mouse:0.3 Expression energy

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA060566
Glial cells Not detected
Neuronal cells Not detected


BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

33.9
Sample id Sample description nTPM
Caudate nucleus
nTPM: 13.8
2290 Female, age 72, unknown 16.8
1781 Male, age 74, unknown 15.8
2289 Male, age 61, right hemisphere 15.7
2288 Male, age 75, left hemisphere 15.6
1854 Male, age 80, left hemisphere 14.6
1857 Female, age 85, left hemisphere 14.1
2846 Female, age 79, unknown 10.6
2481 Female, age 94, left hemisphere 6.9
Globus pallidus, externus
nTPM: 5.4
2646 Male, age 61, right hemisphere 6.4
2567 Female, age 72, unknown 6.1
2772 Female, age 79, unknown 5.7
2395 Male, age 75, both hemispheres 5.5
1996 Male, age 80, right hemisphere 3.3
Globus pallidus, internus
nTPM: 4.8
1818 Male, age 74, unknown 7.7
2566 Female, age 72, unknown 6.0
2483 Female, age 94, right hemisphere 5.8
2111 Female, age 85, right hemisphere 4.1
2287 Male, age 75, right hemisphere 3.9
2037 Male, age 80, right hemisphere 3.0
2778 Female, age 91, both hemispheres 3.0
Nucleus accumbens
nTPM: 20.3
1856 Female, age 91, right hemisphere 32.5
2824 Male, age 61, right hemisphere 31.4
1783 Male, age 74, unknown 25.9
2732 Male, age 80, right hemisphere 18.5
1806 Female, age 85, left hemisphere 17.4
2698 Female, age 72, unknown 17.1
2286 Male, age 75, left hemisphere 12.7
2391 Female, age 94, left hemisphere 7.2
Nucleus basalis of Meynert
nTPM: 10.2
2484 Female, age 94, left hemisphere 12.0
2393 Male, age 80, right hemisphere 11.9
2821 Male, age 75, both hemispheres 10.2
2569 Male, age 61, both hemispheres 6.6
Nucleus of the diagonal band
nTPM: 30.0
2775 Male, age 80, right hemisphere 37.6
2029 Male, age 61, right hemisphere 34.8
1812 Female, age 91, both hemispheres 30.9
2195 Female, age 85, both hemispheres 27.6
1979 Male, age 74, unknown 19.0
Putamen
nTPM: 13.6
1937 Female, age 91, right hemisphere 25.7
1838 Male, age 80, right hemisphere 14.3
2647 Male, age 75, left hemisphere 13.6
1829 Male, age 74, unknown 12.5
2466 Female, age 79, unknown 11.7
2489 Female, age 72, unknown 9.1
2482 Female, age 94, left hemisphere 8.4
Septal nuclei
nTPM: 25.5
1960 Male, age 74, unknown 35.4
2629 Female, age 94, right hemisphere 34.2
2031 Female, age 72, unknown 31.0
2059 Female, age 85, both hemispheres 29.3
2009 Female, age 91, both hemispheres 25.9
2394 Male, age 61, left hemisphere 17.1
2199 Male, age 80, right hemisphere 6.0
Stria terminalis, bed nucleus
nTPM: 33.9
1974 Female, age 91, both hemispheres 39.7
2486 Female, age 94, both hemispheres 38.7
2201 Male, age 74, unknown 23.3

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

10.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 5.2
Samples: 246

Max nTPM: 12.0
Min nTPM: 0.1
Std nTPM: 2.5
Median nTPM: 5.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 12.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 11.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 11.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 11.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 10.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 10.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 10.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 10.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 10.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 10.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 10.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 10.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 10.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 9.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 9.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 9.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 9.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 9.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 9.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 9.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 9.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 8.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 8.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 8.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 8.8
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 8.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 8.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 8.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 8.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 8.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 8.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 8.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 8.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 8.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 8.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 8.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 8.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 7.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 7.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 7.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 7.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 7.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 7.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 7.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 7.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 7.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 7.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 7.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 7.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 7.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 7.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 7.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 7.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 7.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 7.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 7.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 7.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 7.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 7.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 7.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 7.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 6.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 6.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 6.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 6.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 6.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 6.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 6.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 6.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 6.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 6.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 6.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 6.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 6.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 6.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 6.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 6.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 6.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 6.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 6.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 6.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 6.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 6.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 6.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 6.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 6.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 6.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 6.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 6.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 6.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 6.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 5.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 5.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 5.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 5.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 5.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 5.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 5.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 5.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 5.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 5.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 5.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 5.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 5.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 5.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 5.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 5.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 5.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 5.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 5.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 5.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 5.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 5.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 5.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 5.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 5.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 5.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 5.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 5.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 5.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 5.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 5.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 5.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 5.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 5.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 5.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 5.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 5.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 5.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 5.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 5.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 5.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 4.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 4.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 4.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 4.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 4.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 4.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 4.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 4.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 4.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 4.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 4.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 4.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 4.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 4.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 4.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 4.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 4.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 4.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 4.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 4.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 4.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 4.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 4.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 4.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 4.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 4.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 4.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 4.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 4.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 4.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 4.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 4.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 4.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 4.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 4.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 3.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 3.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 3.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 3.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 3.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 3.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 3.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 3.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 3.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 3.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 3.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 3.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 3.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 3.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 3.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 3.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 3.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 3.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 3.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 3.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 3.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 3.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 3.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 3.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 3.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 2.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 2.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 2.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 2.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 2.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 2.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 2.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 2.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 2.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 2.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 2.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 2.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 2.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 2.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 2.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 2.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 2.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 2.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 2.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 2.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 2.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 2.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 2.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 2.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 2.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 2.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 2.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 2.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 1.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 1.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 1.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 1.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 1.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 1.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 1.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 1.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 1.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 1.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 1.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 1.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 1.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 1.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 1.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 0.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 0.9
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 0.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 0.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 0.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 0.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 0.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 0.1
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 10.1
Samples: 246

Max nTPM: 28.0
Min nTPM: 0.9
Std nTPM: 5.1
Median nTPM: 9.6
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 28.0
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 24.5
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 24.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 24.0
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 22.8
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 22.2
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 22.2
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 21.7
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 21.4
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 21.1
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 21.0
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 20.5
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 20.2
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 19.7
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 19.2
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 18.9
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 18.5
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 18.3
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 18.2
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 17.7
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 17.7
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 17.1
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 17.1
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 17.1
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 17.0
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 16.9
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 16.4
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 15.8
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 15.7
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 15.6
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 15.5
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 15.2
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 15.0
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 14.9
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 14.8
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 14.8
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 14.6
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 14.5
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 14.5
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 14.4
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 14.4
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 14.4
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 14.3
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 14.2
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 14.2
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 14.1
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 14.1
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 14.0
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 14.0
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 14.0
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 13.9
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 13.9
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 13.6
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 13.6
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 13.5
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 13.4
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 13.4
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 13.4
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 13.3
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 13.0
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 13.0
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 13.0
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 13.0
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 12.8
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 12.7
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 12.7
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 12.7
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 12.6
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 12.6
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 12.6
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 12.5
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 12.4
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 12.3
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 12.3
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 12.2
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 12.2
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 12.2
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 12.1
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 12.1
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 12.1
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 12.1
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 12.0
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 12.0
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 11.9
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 11.8
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 11.7
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 11.6
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 11.5
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 11.5
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 11.5
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 11.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 11.1
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 11.1
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 11.0
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 10.9
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 10.8
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 10.8
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 10.8
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 10.8
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 10.8
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 10.8
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 10.7
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 10.6
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 10.5
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 10.4
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 10.4
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 10.4
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 10.4
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 10.4
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 10.2
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 10.2
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 10.2
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 10.0
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 10.0
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 9.8
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 9.8
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 9.8
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 9.7
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 9.7
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 9.6
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 9.6
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 9.6
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 9.6
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 9.5
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 9.5
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 9.5
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 9.4
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 9.4
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 9.3
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 9.3
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 9.3
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 9.3
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 9.2
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 9.2
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 9.2
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 9.2
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 9.0
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 9.0
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 9.0
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 9.0
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 8.9
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 8.9
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 8.8
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 8.8
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 8.8
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 8.7
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 8.7
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 8.7
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 8.6
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 8.6
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 8.6
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 8.6
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 8.5
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 8.5
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 8.4
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 8.3
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 8.2
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 8.0
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 8.0
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 8.0
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 7.9
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 7.9
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 7.8
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 7.8
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 7.7
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 7.7
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 7.6
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 7.5
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 7.5
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 7.4
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 7.4
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 7.3
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 7.3
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 7.2
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 7.1
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 7.1
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 7.0
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 7.0
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 7.0
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 7.0
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 6.9
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 6.9
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 6.9
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 6.9
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 6.9
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 6.8
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 6.7
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 6.6
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 6.6
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 6.6
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 6.5
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 6.3
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 6.2
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 6.2
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 6.2
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 6.2
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 5.9
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 5.8
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 5.8
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 5.8
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 5.7
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 5.7
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 5.3
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 5.3
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 5.1
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 5.1
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 5.1
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 5.0
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 5.0
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 4.9
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 4.8
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 4.8
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 4.7
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 4.6
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 4.5
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 4.4
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 4.4
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 3.7
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 3.6
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 3.5
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 3.4
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 3.3
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 3.3
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 3.3
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 3.2
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 2.8
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 2.7
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 2.7
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 2.6
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 2.5
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 2.3
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 2.3
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 2.2
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 2.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 2.0
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 2.0
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 1.8
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 1.8
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 1.7
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 1.6
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 1.5
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 1.4
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 1.3
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 1.2
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 1.0
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 0.9
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Brain - Putamen (basal ganglia)
Average nTPM: 4.4
Samples: 205

Max nTPM: 11.5
Min nTPM: 0.3
Std nTPM: 2.5
Median nTPM: 4.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 11.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 11.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 11.2
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 11.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 10.0
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 9.7
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 9.6
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 9.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 9.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 8.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 8.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 8.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 8.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 8.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 7.9
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 7.9
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 7.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 7.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 7.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 7.7
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 7.6
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 7.6
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 7.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 7.6
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 7.5
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 7.5
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 7.4
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 7.4
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 7.3
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 7.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 7.3
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 7.2
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 7.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 7.0
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 6.9
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 6.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 6.9
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 6.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 6.8
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 6.8
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 6.8
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 6.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 6.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 6.6
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 6.6
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 6.6
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 6.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 6.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 6.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 6.4
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 6.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 6.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 6.3
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 6.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 6.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 6.2
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 6.2
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 6.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 6.1
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 6.0
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 6.0
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 5.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 5.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 5.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 5.7
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 5.7
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 5.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 5.6
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 5.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 5.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 5.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 5.5
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 5.5
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 5.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 5.4
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 5.4
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 5.4
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 5.3
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 5.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 5.1
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 5.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 5.0
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 5.0
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 5.0
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 4.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 4.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 4.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 4.7
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 4.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 4.7
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 4.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 4.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 4.4
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 4.4
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 4.4
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 4.4
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 4.4
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 4.3
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 4.3
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 4.3
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 4.2
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 4.2
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 4.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 4.2
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 4.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 4.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 4.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 4.1
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 4.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 4.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 4.1
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 4.1
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 4.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 3.9
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 3.9
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 3.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 3.8
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 3.8
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 3.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 3.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 3.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 3.6
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 3.6
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 3.5
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 3.5
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 3.5
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 3.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 3.4
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 3.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 3.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 3.2
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 3.2
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 3.2
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 3.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 3.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 3.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 3.1
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 2.9
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 2.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 2.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 2.9
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 2.9
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 2.8
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 2.7
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 2.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 2.7
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 2.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 2.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 2.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 2.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 2.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 2.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 2.3
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 2.2
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 2.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 2.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 1.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 1.9
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 1.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 1.8
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 1.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 1.8
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 1.8
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 1.8
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 1.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 1.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 1.7
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 1.7
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 1.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 1.6
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 1.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 1.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 1.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 1.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 1.5
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 1.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 1.3
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 1.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 1.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 1.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 1.2
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 1.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 1.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 1.2
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 1.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 1.1
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 1.0
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 1.0
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 0.9
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 0.9
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 0.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 0.9
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 0.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 0.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 0.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 0.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 0.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 0.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 0.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 0.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 0.6
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 0.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 0.5
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 0.4
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 0.3
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

7.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 5.8
FF:10164-103B2 76 years, female 5.8
Nucleus accumbens
Scaled Tags Per Million: 4.7
FF:10037-101F1 23-56 years, mixed 4.7
Putamen
Scaled Tags Per Million: 7.5
FF:10176-103C5 60 years, female 7.5
Globus pallidus
Scaled Tags Per Million: 0.3
FF:10161-103A8 76 years, female 0.7
FF:10175-103C4 60 years, female 0.0

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

12.1
Pig sample Sample description nTPM
Caudate
nTPM: 8.9
Samples: 4

Max nTPM: 9.6
Min nTPM: 7.7
Sample A Female 8.7
Sample B Female 9.6
Sample C Male 9.4
Sample D Male 7.7
Putamen
nTPM: 7.8
Samples: 4

Max nTPM: 9.1
Min nTPM: 6.0
Sample A Female 6.0
Sample B Female 8.0
Sample C Male 8.1
Sample D Male 9.1
Septum
nTPM: 12.2
Samples: 4

Max nTPM: 18.8
Min nTPM: 7.1
Sample A Female 13.0
Sample B Female 9.7
Sample C Male 18.8
Sample D Male 7.1
Ventral pallidum
nTPM: 9.8
Samples: 4

Max nTPM: 14.4
Min nTPM: 7.8
Sample A Female 9.0
Sample B Female 7.8
Sample C Male 14.4
Sample D Male 8.0

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

11.7
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 8.6
Samples: 4

Max nTPM: 9.6
Min nTPM: 7.6
Sample A Male 7.6
Sample B Male 8.1
Sample C Female 9.6
Sample D Female 9.2
Septum
nTPM: 11.7
Samples: 4

Max nTPM: 15.9
Min nTPM: 9.2
Sample A Male 15.9
Sample B Male 9.2
Sample C Female 10.9
Sample D Female 10.8
Ventral forebrain
nTPM: 10.6
Samples: 4

Max nTPM: 13.1
Min nTPM: 9.2
Sample A Male 9.2
Sample B Male 13.1
Sample C Female 9.8
Sample D Female 10.4

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.3
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.3
69672946 Antisense, RP_050428_04_H02, Mouse strain C57BL/6J (56 days, male) 0.3
Pallidum
Expression energy: 0.2
69672946 Antisense, RP_050428_04_H02, Mouse strain C57BL/6J (56 days, male) 0.2

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