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SLC27A1
HPA
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  • SLC27A1
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

SLC27A1
Synonyms ACSVL5, FATP, FATP1, FLJ00336, MGC71751
Gene descriptioni

Full gene name according to HGNC.

Solute carrier family 27 member 1
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Enzymes
Metabolic proteins
Transporters
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Membrane, Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 19
Cytoband p13.11
Chromosome location (bp) 17468769 - 17506168
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

3
Ensembl ENSG00000130304 (version 109)
Entrez gene 376497
HGNC HGNC:10995
UniProt Q6PCB7 (UniProt - Evidence at protein level)
neXtProt NX_Q6PCB7
GeneCards SLC27A1
Antibodypedia SLC27A1 antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Mediates the import of long-chain fatty acids (LCFA) into the cell by facilitating their transport at the plasma membrane 1, 2, 3, 4. Also functions as an acyl-CoA ligase catalyzing the ATP-dependent formation of fatty acyl-CoA using LCFA and very-long-chain fatty acids (VLCFA) as substrates, which prevents fatty acid efflux from cells and might drive more fatty acid uptake. May act directly as a bona fide transporter, or alternatively, in a cytoplasmic or membrane-associated multimeric protein complex to trap and draw fatty acids towards accumulation. Plays a pivotal role in regulating available LCFA substrates from exogenous sources in tissues undergoing high levels of beta-oxidation or triglyceride synthesis. May be involved in regulation of cholesterol metabolism (By similarity). Probably involved in fatty acid transport across the blood barrier 5.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Ligase
Biological process (UniProt)i

Keywords assigned by UniProt to proteins because they are involved in a particular biological process.

Fatty acid metabolism, Lipid metabolism, Lipid transport, Transport
Ligand (UniProt)i

Keywords assigned by UniProt to proteins because they bind, are associated with, or whose activity is dependent of some molecule.

Nucleotide-binding
Gene summary (Entrez)i

Useful information about the gene from Entrez

Enables biotin transmembrane transporter activity; efflux transmembrane transporter activity; and long-chain fatty acid transporter activity. Involved in several processes, including carboxylic acid transmembrane transport; glycerophospholipid biosynthetic process; and lipid transport across blood-brain barrier. Located in membrane. Part of plasma membrane. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
SLC27A1-201
ENSP00000252595
ENST00000252595
Q6PCB7
[Direct mapping] Long-chain fatty acid transport protein 1
Show all
Enzymes
   ENZYME proteins
   Ligase
Metabolic proteins
Transporters
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   1TM proteins predicted by MDM
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
   DeepTMHMM predicted membrane proteins
Show all
GO:0000166 [nucleotide binding]
GO:0001579 [medium-chain fatty acid transport]
GO:0001676 [long-chain fatty acid metabolic process]
GO:0004467 [long-chain fatty acid-CoA ligase activity]
GO:0005324 [long-chain fatty acid transporter activity]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005743 [mitochondrial inner membrane]
GO:0005783 [endoplasmic reticulum]
GO:0005886 [plasma membrane]
GO:0006629 [lipid metabolic process]
GO:0006631 [fatty acid metabolic process]
GO:0006646 [phosphatidylethanolamine biosynthetic process]
GO:0006654 [phosphatidic acid biosynthetic process]
GO:0006655 [phosphatidylglycerol biosynthetic process]
GO:0006656 [phosphatidylcholine biosynthetic process]
GO:0006659 [phosphatidylserine biosynthetic process]
GO:0006661 [phosphatidylinositol biosynthetic process]
GO:0006869 [lipid transport]
GO:0009409 [response to cold]
GO:0009925 [basal plasma membrane]
GO:0010867 [positive regulation of triglyceride biosynthetic process]
GO:0012505 [endomembrane system]
GO:0015225 [biotin transmembrane transporter activity]
GO:0015245 [fatty acid transmembrane transporter activity]
GO:0015562 [efflux transmembrane transporter activity]
GO:0015878 [biotin transport]
GO:0015908 [fatty acid transport]
GO:0015909 [long-chain fatty acid transport]
GO:0015911 [long-chain fatty acid import across plasma membrane]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016874 [ligase activity]
GO:0031652 [positive regulation of heat generation]
GO:0031957 [very long-chain fatty acid-CoA ligase activity]
GO:0032049 [cardiolipin biosynthetic process]
GO:0032868 [response to insulin]
GO:0033211 [adiponectin-activated signaling pathway]
GO:0042802 [identical protein binding]
GO:0044381 [glucose import in response to insulin stimulus]
GO:0044539 [long-chain fatty acid import into cell]
GO:0047676 [arachidonate-CoA ligase activity]
GO:0071072 [negative regulation of phospholipid biosynthetic process]
GO:0071902 [positive regulation of protein serine/threonine kinase activity]
GO:0090434 [oleoyl-CoA ligase activity]
GO:0140115 [export across plasma membrane]
GO:0150104 [transport across blood-brain barrier]
GO:1901480 [oleate transmembrane transporter activity]
GO:1905135 [biotin import across plasma membrane]
GO:1990379 [lipid transport across blood-brain barrier]
Show all
646 aa
71.1 kDa
No 1
SLC27A1-204
ENSP00000472313
ENST00000598424
Q6PCB7
[Direct mapping] Long-chain fatty acid transport protein 1
Show all
Enzymes
   ENZYME proteins
   Ligase
Metabolic proteins
Transporters
   MEMSAT-SVM predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000166 [nucleotide binding]
GO:0001579 [medium-chain fatty acid transport]
GO:0001676 [long-chain fatty acid metabolic process]
GO:0004467 [long-chain fatty acid-CoA ligase activity]
GO:0005324 [long-chain fatty acid transporter activity]
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005743 [mitochondrial inner membrane]
GO:0005783 [endoplasmic reticulum]
GO:0005886 [plasma membrane]
GO:0006629 [lipid metabolic process]
GO:0006631 [fatty acid metabolic process]
GO:0006646 [phosphatidylethanolamine biosynthetic process]
GO:0006654 [phosphatidic acid biosynthetic process]
GO:0006655 [phosphatidylglycerol biosynthetic process]
GO:0006656 [phosphatidylcholine biosynthetic process]
GO:0006659 [phosphatidylserine biosynthetic process]
GO:0006661 [phosphatidylinositol biosynthetic process]
GO:0006869 [lipid transport]
GO:0009409 [response to cold]
GO:0009925 [basal plasma membrane]
GO:0010867 [positive regulation of triglyceride biosynthetic process]
GO:0012505 [endomembrane system]
GO:0015225 [biotin transmembrane transporter activity]
GO:0015245 [fatty acid transmembrane transporter activity]
GO:0015562 [efflux transmembrane transporter activity]
GO:0015878 [biotin transport]
GO:0015909 [long-chain fatty acid transport]
GO:0015911 [long-chain fatty acid import across plasma membrane]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016874 [ligase activity]
GO:0031652 [positive regulation of heat generation]
GO:0031957 [very long-chain fatty acid-CoA ligase activity]
GO:0032049 [cardiolipin biosynthetic process]
GO:0032868 [response to insulin]
GO:0033211 [adiponectin-activated signaling pathway]
GO:0044381 [glucose import in response to insulin stimulus]
GO:0044539 [long-chain fatty acid import into cell]
GO:0047676 [arachidonate-CoA ligase activity]
GO:0071072 [negative regulation of phospholipid biosynthetic process]
GO:0071902 [positive regulation of protein serine/threonine kinase activity]
GO:0090434 [oleoyl-CoA ligase activity]
GO:0140115 [export across plasma membrane]
GO:0150104 [transport across blood-brain barrier]
GO:1901480 [oleate transmembrane transporter activity]
GO:1905135 [biotin import across plasma membrane]
GO:1990379 [lipid transport across blood-brain barrier]
Show all
467 aa
51.8 kDa
No 0
SLC27A1-207
ENSP00000470457
ENST00000599965
M0QZC9
[Direct mapping] Long-chain fatty acid transport protein 1
Show all
Metabolic proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0004467 [long-chain fatty acid-CoA ligase activity]
GO:0015245 [fatty acid transmembrane transporter activity]
GO:0016021 [integral component of membrane]
GO:0031957 [very long-chain fatty acid-CoA ligase activity]
Show all
166 aa
18.4 kDa
No 0

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