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ARPC1B
HPA
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  • ARPC1B
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

ARPC1B
Synonyms ARC41, p40-ARC, p41-ARC
Gene descriptioni

Full gene name according to HGNC.

Actin related protein 2/3 complex subunit 1B
Protein classi

Assigned HPA protein class(es) for the encoded protein(s).

Disease related genes
Plasma proteins
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 7
Cytoband q22.1
Chromosome location (bp) 99374249 - 99394816
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

12
Ensembl ENSG00000130429 (version 109)
Entrez gene 10095
HGNC HGNC:704
UniProt O15143 (UniProt - Evidence at protein level)
neXtProt NX_O15143
GeneCards ARPC1B
Antibodypedia ARPC1B antibodies


PROTEIN FUNCTION
Protein function (UniProt)i

Useful information about the protein provided by UniProt.

Component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF) 1, 2. The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility 3, 4. In addition to its role in the cytoplasmic cytoskeleton, the Arp2/3 complex also promotes actin polymerization in the nucleus, thereby regulating gene transcription and repair of damaged DNA 5. The Arp2/3 complex promotes homologous recombination (HR) repair in response to DNA damage by promoting nuclear actin polymerization, leading to drive motility of double-strand breaks (DSBs) 6.... show less
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

Actin-binding
Gene summary (Entrez)i

Useful information about the gene from Entrez

This gene encodes one of seven subunits of the human Arp2/3 protein complex. This subunit is a member of the SOP2 family of proteins and is most similar to the protein encoded by gene ARPC1A. The similarity between these two proteins suggests that they both may function as p41 subunit of the human Arp2/3 complex that has been implicated in the control of actin polymerization in cells. It is possible that the p41 subunit is involved in assembling and maintaining the structure of the Arp2/3 complex. Multiple versions of the p41 subunit may adapt the functions of the complex to different cell types or developmental stages. This protein also has a role in centrosomal homeostasis by being an activator and substrate of the Aurora A kinase. [provided by RefSeq, Mar 2011]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
ARPC1B-201
ENSP00000398620
ENST00000414376
C9JBJ7
[Direct mapping] Actin-related protein 2/3 complex subunit 1B
A4D275
[Target identity:100%; Query identity:100%] Actin-related protein 2/3 complex subunit
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003779 [actin binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005856 [cytoskeleton]
GO:0005885 [Arp2/3 protein complex]
GO:0015629 [actin cytoskeleton]
GO:0030833 [regulation of actin filament polymerization]
GO:0034314 [Arp2/3 complex-mediated actin nucleation]
Show all
372 aa
40.9 kDa
No 0
ARPC1B-202
ENSP00000403324
ENST00000417330
C9JEY1
[Direct mapping] Actin-related protein 2/3 complex subunit 1B
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003779 [actin binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005856 [cytoskeleton]
GO:0005885 [Arp2/3 protein complex]
GO:0015629 [actin cytoskeleton]
GO:0030833 [regulation of actin filament polymerization]
GO:0034314 [Arp2/3 complex-mediated actin nucleation]
Show all
334 aa
36.9 kDa
No 0
ARPC1B-203
ENSP00000413067
ENST00000418347
C9JTT6
[Direct mapping] Actin-related protein 2/3 complex subunit 1B
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003779 [actin binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005856 [cytoskeleton]
GO:0005885 [Arp2/3 protein complex]
GO:0015629 [actin cytoskeleton]
GO:0030833 [regulation of actin filament polymerization]
GO:0034314 [Arp2/3 complex-mediated actin nucleation]
Show all
82 aa
9.5 kDa
No 0
ARPC1B-204
ENSP00000403211
ENST00000427217
O15143
[Direct mapping] Actin-related protein 2/3 complex subunit 1B
Show all
A4D275
[Target identity:100%; Query identity:100%] Actin-related protein 2/3 complex subunit
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Disease related genes
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003779 [actin binding]
GO:0005200 [structural constituent of cytoskeleton]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0005885 [Arp2/3 protein complex]
GO:0005925 [focal adhesion]
GO:0015629 [actin cytoskeleton]
GO:0030833 [regulation of actin filament polymerization]
GO:0034314 [Arp2/3 complex-mediated actin nucleation]
GO:0051015 [actin filament binding]
GO:0070062 [extracellular exosome]
Show all
372 aa
40.9 kDa
No 0
ARPC1B-205
ENSP00000408758
ENST00000429246
C9JM51
[Direct mapping] Actin-related protein 2/3 complex subunit 1B
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005856 [cytoskeleton]
GO:0005885 [Arp2/3 protein complex]
GO:0015629 [actin cytoskeleton]
GO:0030833 [regulation of actin filament polymerization]
GO:0034314 [Arp2/3 complex-mediated actin nucleation]
Show all
30 aa
3.5 kDa
No 0
ARPC1B-206
ENSP00000398110
ENST00000431816
O15143
[Direct mapping] Actin-related protein 2/3 complex subunit 1B
Show all
A4D275
[Target identity:100%; Query identity:100%] Actin-related protein 2/3 complex subunit
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Disease related genes
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003779 [actin binding]
GO:0005200 [structural constituent of cytoskeleton]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0005885 [Arp2/3 protein complex]
GO:0005925 [focal adhesion]
GO:0015629 [actin cytoskeleton]
GO:0030833 [regulation of actin filament polymerization]
GO:0034314 [Arp2/3 complex-mediated actin nucleation]
GO:0051015 [actin filament binding]
GO:0070062 [extracellular exosome]
Show all
372 aa
40.9 kDa
No 0
ARPC1B-208
ENSP00000413173
ENST00000443222
C9K057
[Direct mapping] Actin-related protein 2/3 complex subunit 1B
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003779 [actin binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005856 [cytoskeleton]
GO:0005885 [Arp2/3 protein complex]
GO:0015629 [actin cytoskeleton]
GO:0030833 [regulation of actin filament polymerization]
GO:0034314 [Arp2/3 complex-mediated actin nucleation]
Show all
352 aa
38.8 kDa
No 0
ARPC1B-210
ENSP00000389631
ENST00000451682
O15143
[Direct mapping] Actin-related protein 2/3 complex subunit 1B
Show all
A4D275
[Target identity:100%; Query identity:100%] Actin-related protein 2/3 complex subunit
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Disease related genes
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003779 [actin binding]
GO:0005200 [structural constituent of cytoskeleton]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0005885 [Arp2/3 protein complex]
GO:0005925 [focal adhesion]
GO:0015629 [actin cytoskeleton]
GO:0030833 [regulation of actin filament polymerization]
GO:0034314 [Arp2/3 complex-mediated actin nucleation]
GO:0051015 [actin filament binding]
GO:0070062 [extracellular exosome]
Show all
372 aa
40.9 kDa
No 0
ARPC1B-211
ENSP00000410238
ENST00000455009
O15143
[Direct mapping] Actin-related protein 2/3 complex subunit 1B
Show all
A4D275
[Target identity:100%; Query identity:100%] Actin-related protein 2/3 complex subunit
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Disease related genes
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003779 [actin binding]
GO:0005200 [structural constituent of cytoskeleton]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0005885 [Arp2/3 protein complex]
GO:0005925 [focal adhesion]
GO:0015629 [actin cytoskeleton]
GO:0030833 [regulation of actin filament polymerization]
GO:0034314 [Arp2/3 complex-mediated actin nucleation]
GO:0051015 [actin filament binding]
GO:0070062 [extracellular exosome]
Show all
372 aa
40.9 kDa
No 0
ARPC1B-212
ENSP00000388802
ENST00000458033
O15143
[Direct mapping] Actin-related protein 2/3 complex subunit 1B
Show all
A4D275
[Target identity:100%; Query identity:100%] Actin-related protein 2/3 complex subunit
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Disease related genes
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003779 [actin binding]
GO:0005200 [structural constituent of cytoskeleton]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0005885 [Arp2/3 protein complex]
GO:0005925 [focal adhesion]
GO:0015629 [actin cytoskeleton]
GO:0030833 [regulation of actin filament polymerization]
GO:0034314 [Arp2/3 complex-mediated actin nucleation]
GO:0051015 [actin filament binding]
GO:0070062 [extracellular exosome]
Show all
372 aa
40.9 kDa
No 0
ARPC1B-221
ENSP00000494033
ENST00000645391
O15143
[Direct mapping] Actin-related protein 2/3 complex subunit 1B
Show all
A4D275
[Target identity:100%; Query identity:100%] Actin-related protein 2/3 complex subunit
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Disease related genes
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003779 [actin binding]
GO:0005200 [structural constituent of cytoskeleton]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0005885 [Arp2/3 protein complex]
GO:0005925 [focal adhesion]
GO:0015629 [actin cytoskeleton]
GO:0030833 [regulation of actin filament polymerization]
GO:0034314 [Arp2/3 complex-mediated actin nucleation]
GO:0051015 [actin filament binding]
GO:0070062 [extracellular exosome]
Show all
372 aa
40.9 kDa
No 0
ARPC1B-222
ENSP00000496599
ENST00000646101
O15143
[Direct mapping] Actin-related protein 2/3 complex subunit 1B
Show all
A4D275
[Target identity:100%; Query identity:100%] Actin-related protein 2/3 complex subunit
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Plasma proteins
Disease related genes
Mapped to neXtProt
   neXtProt - Evidence at protein level
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003779 [actin binding]
GO:0005200 [structural constituent of cytoskeleton]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0005737 [cytoplasm]
GO:0005829 [cytosol]
GO:0005856 [cytoskeleton]
GO:0005885 [Arp2/3 protein complex]
GO:0005925 [focal adhesion]
GO:0015629 [actin cytoskeleton]
GO:0030833 [regulation of actin filament polymerization]
GO:0032355 [response to estradiol]
GO:0034314 [Arp2/3 complex-mediated actin nucleation]
GO:0036284 [tubulobulbar complex]
GO:0043627 [response to estrogen]
GO:0044877 [protein-containing complex binding]
GO:0051015 [actin filament binding]
GO:0070062 [extracellular exosome]
Show all
372 aa
40.9 kDa
No 0

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