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SSBP4
HPA
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  • SSBP4
PROTEIN SUMMARY GENE INFORMATION RNA DATA ANTIBODY DATA
GENERAL INFORMATIONi

General description of the gene and the encoded protein(s) using information from HGNC and Ensembl, as well as predictions made by the Human Protein Atlas project.

Gene namei

Official gene symbol, which is typically a short form of the gene name, according to HGNC.

SSBP4
Synonyms
Gene descriptioni

Full gene name according to HGNC.

Single stranded DNA binding protein 4
Predicted locationi

All transcripts of all genes have been analyzed regarding the location(s) of corresponding protein based on prediction methods for signal peptides and transmembrane regions.

  • Genes with at least one transcript predicted to encode a secreted protein, according to prediction methods or to UniProt location data, have been further annotated and classified with the aim to determine if the corresponding protein(s) are secreted or actually retained in intracellular locations or membrane-attached.

  • Remaining genes, with no transcript predicted to encode a secreted protein, will be assigned the prediction-based location(s).

The annotated location overrules the predicted location, so that a gene encoding a predicted secreted protein that has been annotated as intracellular will have intracellular as the final location.

Intracellular
Protein evidence Evidence at protein level (all genes)
GENE INFORMATIONi

Gene information from Ensembl and Entrez, as well as links to available gene identifiers are displayed here. Information was retrieved from Ensembl if not indicated otherwise.

Chromosome 19
Cytoband p13.11
Chromosome location (bp) 18418864 - 18434562
Number of transcriptsi

Number of protein-coding transcripts from the gene as defined by Ensembl.

8
Ensembl ENSG00000130511 (version 109)
Entrez gene 170463
HGNC HGNC:15676
UniProt Q9BWG4 (UniProt - Evidence at protein level)
neXtProt NX_Q9BWG4
GeneCards SSBP4
Antibodypedia SSBP4 antibodies


PROTEIN FUNCTION
Molecular function (UniProt)i

Keywords assigned by UniProt to proteins due to their particular molecular function.

DNA-binding
Gene summary (Entrez)i

Useful information about the gene from Entrez

Predicted to enable single-stranded DNA binding activity. Predicted to be involved in positive regulation of transcription by RNA polymerase II. Predicted to be integral component of membrane. Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Apr 2022]... show less
PROTEIN INFORMATIONi

The protein information section displays alternative protein-coding transcripts (splice variants) encoded by this gene according to the Ensembl database.

The Splice variant identifier links to the Ensembl website protein summary for the selected splice variant. The data in the Swissprot and TrEMBL columns links to corresponding pages in the UniProt database.

The protein classes assigned to this protein are shown if expanding the data in the protein class column. Parent protein classes are in bold font and subclasses are listed under the parent class.

The length of the protein (amino acid residues according to Ensembl), molecular mass (kDalton), predicted signal peptide and number of predicted transmembrane region(s) according to in-house majority decision methods based on sets of predictors are also reported.
Splice variant SwissProt TrEMBL Protein class Gene ontology Length & mass Signal peptide
(predicted)
Transmembrane regions
(predicted)
SSBP4-201
ENSP00000270061
ENST00000270061
Q9BWG4
[Direct mapping] Single-stranded DNA-binding protein 4
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0003677 [DNA binding]
GO:0003697 [single-stranded DNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0045944 [positive regulation of transcription by RNA polymerase II]
Show all
385 aa
39.4 kDa
No 0
SSBP4-202
ENSP00000252807
ENST00000348495
Q9BWG4
[Direct mapping] Single-stranded DNA-binding protein 4
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Mapped to neXtProt
   neXtProt - Evidence at protein level
Show all
GO:0003677 [DNA binding]
GO:0003697 [single-stranded DNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0045944 [positive regulation of transcription by RNA polymerase II]
Show all
363 aa
37.2 kDa
No 0
SSBP4-203
ENSP00000475352
ENST00000593641
U3KPY3
[Direct mapping] Single-stranded DNA-binding protein 4
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
206 aa
20.4 kDa
No 0
SSBP4-204
ENSP00000475538
ENST00000597724
U3KQ46
[Direct mapping] Single-stranded DNA-binding protein 4
Show all
   Phobius predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   SPOCTOPUS predicted secreted proteins
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
GO:0003697 [single-stranded DNA binding]
GO:0005515 [protein binding]
GO:0005634 [nucleus]
GO:0016020 [membrane]
Show all
234 aa
24.8 kDa
No 0
SSBP4-206
ENSP00000476567
ENST00000599699
V9GYB2
[Direct mapping] Single-stranded DNA-binding protein 4
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
71 aa
7.1 kDa
No 0
SSBP4-209
ENSP00000475668
ENST00000601357
U3KQ98
[Direct mapping] Single-stranded DNA-binding protein 4
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
56 aa
5.6 kDa
No 0
SSBP4-213
ENSP00000476084
ENST00000602088
U3KQN6
[Direct mapping] Single-stranded DNA-binding protein 4
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
117 aa
11.7 kDa
No 0
SSBP4-215
ENSP00000486132
ENST00000625926
M0R338
[Direct mapping] Single-stranded DNA-binding protein 4
Show all
Predicted intracellular proteins
   Intracellular proteins predicted by MDM and MDSEC
Show all
53 aa
5.6 kDa
No 0

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