PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:96.7 nTPM
FANTOM5:115.7 Scaled Tags Per Million
Pig:89.2 nTPM
Mouse:289.4 nTPM
Allen mouse:12.2 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 96.7
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 36.0
1984 Male, age 76, both hemispheres 48.0
2301 Female, age 85, both hemispheres 35.6
2090 Male, age 80, both hemispheres 30.8
2188 Female, age 91, both hemispheres 29.7
Area postrema
nTPM: 15.4
2054 Male, age 76, both hemispheres 37.9
2306 Male, age 80, both hemispheres 4.7
2799 Male, age 61, both hemispheres 3.4
Dorsal cochlear nucleus
nTPM: 41.8
2058 Male, age 76, both hemispheres 54.1
2370 Male, age 61, both hemispheres 44.0
2187 Female, age 91, both hemispheres 43.6
2802 Male, age 74, right hemisphere 38.7
2378 Male, age 80, both hemispheres 28.3
Dorsal medullary reticular nucleus
nTPM: 62.3
2040 Female, age 85, both hemispheres 101.9
2373 Male, age 61, both hemispheres 42.7
2088 Male, age 76, both hemispheres 42.2
Dorsal motor vagal complex
nTPM: 46.2
2133 Female, age 91, both hemispheres 111.8
2000 Male, age 74, unknown 67.9
2844 Male, age 55, unknown 51.8
2813 Female, age 72, unknown 45.0
2643 Male, age 74, both hemispheres 27.3
2797 Male, age 61, both hemispheres 22.3
2185 Male, age 76, both hemispheres 22.2
2807 Female, age 85, both hemispheres 21.4
Dorsal tegmental nucleus
nTPM: 40.0
2083 Male, age 80, both hemispheres 57.2
1936 Male, age 76, left hemisphere 41.1
2358 Male, age 61, both hemispheres 35.8
2326 Male, age 74, both hemispheres 26.1
Dorsolateral tegmental area
nTPM: 43.8
2654 Male, age 80, both hemispheres 58.7
2751 Female, age 85, both hemispheres 57.2
2141 Male, age 76, both hemispheres 56.3
2360 Male, age 74, both hemispheres 32.1
2337 Male, age 61, both hemispheres 15.0
Gigantocellular reticular nuclei, medullary
nTPM: 56.7
2462 Male, age 74, both hemispheres 115.6
1876 Female, age 85, both hemispheres 67.6
2022 Male, age 76, right hemisphere 60.3
2310 Male, age 80, both hemispheres 47.0
2387 Female, age 91, both hemispheres 31.6
2314 Male, age 61, both hemispheres 18.1
Gigantocellular reticular nuclei, pars
nTPM: 58.2
2168 Male, age 76, both hemispheres 89.2
2084 Female, age 85, both hemispheres 77.9
2336 Male, age 61, both hemispheres 59.3
2706 Male, age 80, both hemispheres 33.3
2330 Male, age 80, both hemispheres 31.4
Inferior olive
nTPM: 14.4
2085 Female, age 85, both hemispheres 25.5
2628 Female, age 91, both hemispheres 17.1
2178 Male, age 61, both hemispheres 11.8
2563 Male, age 74, both hemispheres 9.4
2379 Male, age 80, both hemispheres 8.2
Kolliker-Fuse nucleus
nTPM: 51.4
2163 Male, age 80, both hemispheres 89.1
2793 Female, age 91, left hemisphere 37.4
2315 Male, age 76, right hemisphere 27.6
Lateral lemniscal nuclei
nTPM: 74.7
2453 Male, age 74, right hemisphere 99.3
2169 Male, age 76, both hemispheres 88.5
2746 Female, age 85, left hemisphere 77.4
2036 Male, age 80, both hemispheres 74.9
2320 Female, age 91, left hemisphere 33.3
Lateral medullary reticular nucleus
nTPM: 36.8
2044 Male, age 76, both hemispheres 82.3
2190 Female, age 85, both hemispheres 38.7
2804 Female, age 91, both hemispheres 30.0
2374 Male, age 61, both hemispheres 26.4
2852 Male, age 80, both hemispheres 25.2
2305 Male, age 74, both hemispheres 18.1
Lateral parabrachial nucleus
nTPM: 49.3
2139 Female, age 85, right hemisphere 85.2
2790 Male, age 61, both hemispheres 50.4
2013 Male, age 80, both hemispheres 45.8
2792 Male, age 76, both hemispheres 15.7
Lateral vestibular nucleus
nTPM: 57.9
2184 Male, age 76, both hemispheres 75.6
2311 Male, age 80, both hemispheres 40.2
Locus coeruleus
nTPM: 96.7
2720 Male, age 74, both hemispheres 152.3
2123 Female, age 91, both hemispheres 148.7
2014 Male, age 55, unknown 86.4
1980 Male, age 76, both hemispheres 77.9
2788 Male, age 74, unknown 72.0
2317 Female, age 72, unknown 71.4
2162 Male, age 80, both hemispheres 68.0
Medial olivary nucleus
nTPM: 12.9
2851 Male, age 80, both hemispheres 22.9
1962 Male, age 76, both hemispheres 17.2
2138 Female, age 91, both hemispheres 7.0
1943 Male, age 61, both hemispheres 4.5
Medial parabrachial nucleus
nTPM: 55.7
2170 Female, age 91, both hemispheres 65.0
2156 Male, age 61, both hemispheres 61.5
2854 Male, age 80, both hemispheres 60.6
2786 Male, age 76, both hemispheres 48.0
2463 Female, age 85, right hemisphere 43.3
Medial periolivary nuclei
nTPM: 64.0
2171 Female, age 85, both hemispheres 108.8
2063 Male, age 76, both hemispheres 89.8
2791 Male, age 74, right hemisphere 60.1
2081 Male, age 80, both hemispheres 33.0
2458 Female, age 91, both hemispheres 28.5
Medial vestibular nucleus
nTPM: 76.9
2803 Female, age 91, both hemispheres 87.8
2134 Male, age 76, both hemispheres 86.6
2743 Female, age 85, both hemispheres 73.4
2801 Male, age 74, both hemispheres 73.2
2093 Male, age 80, both hemispheres 72.1
2624 Male, age 61, both hemispheres 68.5
Motor facial nucleus
nTPM: 67.5
2062 Male, age 76, both hemispheres 100.2
2365 Male, age 74, right hemisphere 89.9
2697 Female, age 85, both hemispheres 63.6
2327 Male, age 80, both hemispheres 54.0
2126 Male, age 61, both hemispheres 53.1
2795 Female, age 91, both hemispheres 44.3
Motor hypoglossal nucleus
nTPM: 70.3
2461 Male, age 61, both hemispheres 93.6
2125 Female, age 91, both hemispheres 93.5
2132 Female, age 85, both hemispheres 80.9
2182 Male, age 80, both hemispheres 42.7
2277 Male, age 76, both hemispheres 41.0
Motor trigeminal nucleus
nTPM: 51.6
2079 Male, age 80, both hemispheres 62.9
2335 Male, age 61, both hemispheres 56.8
2560 Male, age 74, both hemispheres 56.0
2309 Male, age 76, both hemispheres 52.1
2321 Female, age 91, both hemispheres 30.0
Nuclei of the trapezoid body
nTPM: 79.2
2159 Male, age 61, both hemispheres 120.6
2735 Female, age 85, both hemispheres 104.1
1983 Male, age 76, both hemispheres 82.5
2166 Male, age 80, both hemispheres 52.2
2368 Female, age 91, both hemispheres 36.6
Nucleus ambiguus
nTPM: 51.3
2096 Female, age 85, both hemispheres 85.1
2071 Male, age 76, both hemispheres 17.6
Nucleus cuneatus
nTPM: 33.3
2131 Male, age 76, both hemispheres 68.0
2100 Male, age 76, both hemispheres 47.7
2376 Male, age 61, both hemispheres 43.3
2562 Male, age 61, both hemispheres 43.0
2564 Male, age 74, both hemispheres 35.5
2381 Male, age 80, both hemispheres 22.4
2805 Female, age 91, both hemispheres 18.1
2808 Female, age 85, both hemispheres 13.0
2380 Male, age 80, both hemispheres 8.5
Nucleus gracilis
nTPM: 11.6
2627 Male, age 74, both hemispheres 17.0
2299 Female, age 85, both hemispheres 9.4
2382 Male, age 80, both hemispheres 8.3
Nucleus raphe magnus
nTPM: 88.1
2160 Male, age 61, both hemispheres 148.4
2455 Male, age 74, both hemispheres 114.9
2172 Female, age 85, both hemispheres 114.6
2051 Male, age 76, both hemispheres 58.3
2328 Male, age 80, both hemispheres 54.5
2459 Female, age 91, both hemispheres 37.6
Nucleus raphe obscurus
nTPM: 25.5
2800 Male, age 61, midline 37.0
2845 Female, age 85, midline 33.3
2142 Male, age 76, midline 6.2
Nucleus raphe pallidus
nTPM: 35.4
2183 Male, age 80, midline 64.6
1924 Male, age 61, midline 32.4
2145 Male, age 76, midline 9.3
Nucleus tractus solitarii
nTPM: 43.5
2144 Female, age 91, right hemisphere 60.3
2656 Male, age 76, both hemispheres 49.6
2191 Female, age 85, both hemispheres 34.0
2307 Male, age 80, both hemispheres 30.2
Paramedian reticular nucleus
nTPM: 77.5
2050 Female, age 85, both hemispheres 104.7
2313 Male, age 61, both hemispheres 83.9
2057 Male, age 80, both hemispheres 78.8
2052 Male, age 76, both hemispheres 42.8
Parvicellular reticular nuclei
nTPM: 68.2
2558 Male, age 74, both hemispheres 87.4
2119 Male, age 80, both hemispheres 61.9
2095 Male, age 76, both hemispheres 55.2
Parvicellular reticular nuclei, medullary
nTPM: 80.6
2189 Female, age 91, both hemispheres 103.0
2091 Female, age 85, both hemispheres 79.4
2181 Male, age 80, left hemisphere 59.4
Pedunculopontine tegmental nucleus
nTPM: 53.8
1921 Female, age 85, both hemispheres 64.0
2334 Male, age 80, both hemispheres 59.5
2338 Male, age 61, both hemispheres 38.0
Peritrigeminal nucleus
nTPM: 63.4
2179 Male, age 61, both hemispheres 71.0
2136 Male, age 76, both hemispheres 60.8
2067 Female, age 85, both hemispheres 58.4
Pontine nuclei
nTPM: 77.7
2787 Female, age 85, both hemispheres 129.3
2727 Male, age 61, right hemisphere 124.1
1863 Male, age 55, unknown 86.6
2109 Female, age 72, unknown 78.6
1968 Male, age 76, left hemisphere 77.7
2454 Male, age 74, left hemisphere 55.4
2115 Male, age 80, left hemisphere 38.5
2319 Female, age 91, both hemispheres 31.3
Pontine raphe nucleus
nTPM: 73.2
2122 Female, age 85, midline 93.4
2853 Male, age 76, midline 53.0
Posteroventral cochlear nucleus
nTPM: 39.4
2752 Female, age 85, both hemispheres 82.7
2070 Male, age 76, both hemispheres 53.5
2371 Male, age 61, both hemispheres 38.0
2341 Male, age 80, both hemispheres 19.8
2135 Female, age 91, both hemispheres 3.1
Prepositus hypoglossal nucleus
nTPM: 60.6
2855 Female, age 85, right hemisphere 72.1
2086 Male, age 80, both hemispheres 49.1
Principal sensory trigeminal nucleus
nTPM: 73.4
2158 Male, age 61, both hemispheres 121.8
2008 Male, age 80, left hemisphere 76.7
2324 Male, age 76, both hemispheres 62.4
2367 Female, age 91, left hemisphere 32.6
Reticular pontine nucleus, caudal
nTPM: 47.3
2332 Male, age 80, right hemisphere 63.0
2092 Male, age 76, both hemispheres 62.9
2559 Male, age 74, both hemispheres 34.4
2457 Female, age 91, both hemispheres 28.9
Reticular pontine nucleus, oral
nTPM: 59.0
2012 Female, age 85, both hemispheres 83.0
2361 Male, age 74, both hemispheres 73.4
1939 Male, age 80, both hemispheres 60.5
2167 Male, age 76, both hemispheres 52.2
2366 Female, age 91, both hemispheres 26.0
Reticulotegmental nucleus
nTPM: 55.9
2325 Male, age 76, both hemispheres 71.7
2452 Male, age 74, both hemispheres 60.2
2322 Female, age 91, both hemispheres 47.2
2333 Male, age 80, both hemispheres 44.5
Spinal trigeminal nucleus, caudal
nTPM: 63.0
2390 Female, age 91, both hemispheres 140.6
2447 Male, age 76, both hemispheres 64.0
2642 Male, age 74, both hemispheres 40.1
2308 Male, age 80, both hemispheres 35.7
2312 Male, age 61, both hemispheres 34.6
Spinal trigeminal nucleus, interpolar
nTPM: 90.6
2625 Male, age 61, both hemispheres 145.2
2066 Male, age 76, right hemisphere 104.8
2033 Male, age 80, both hemispheres 71.2
2389 Female, age 91, both hemispheres 70.7
2386 Female, age 85, both hemispheres 61.1
Spinal trigeminal nucleus, oral
nTPM: 63.9
2737 Female, age 85, both hemispheres 78.6
2164 Male, age 80, both hemispheres 64.3
1978 Male, age 76, both hemispheres 48.9
Spinal vestibular nucleus
nTPM: 64.4
2186 Female, age 91, both hemispheres 92.5
2780 Male, age 80, both hemispheres 74.4
2806 Female, age 85, both hemispheres 65.4
2796 Male, age 61, both hemispheres 65.0
2748 Male, age 76, both hemispheres 56.6
2384 Male, age 74, both hemispheres 32.3
Subcoeruleus area
nTPM: 63.7
2323 Female, age 91, left hemisphere 102.8
1958 Male, age 80, both hemispheres 69.8
2089 Male, age 76, left hemisphere 62.7
2451 Male, age 74, both hemispheres 45.3
2369 Female, age 85, left hemisphere 37.7
Superior olive
nTPM: 65.9
1875 Female, age 85, both hemispheres 106.7
2364 Male, age 74, right hemisphere 71.1
2020 Male, age 76, both hemispheres 58.1
2329 Male, age 80, right hemisphere 47.7
2561 Female, age 91, both hemispheres 45.9
Superior vestibular nucleus
nTPM: 41.4
2015 Male, age 80, both hemispheres 57.0
2061 Male, age 76, both hemispheres 42.8
2383 Male, age 74, both hemispheres 24.4
Ventral medullary reticular nucleus
nTPM: 42.6
2060 Male, age 76, both hemispheres 58.5
2372 Male, age 61, both hemispheres 26.6
Ventral periolivary nuclei
nTPM: 72.0
2130 Female, age 85, both hemispheres 102.5
2165 Male, age 80, both hemispheres 79.0
2023 Male, age 76, both hemispheres 54.8
2794 Female, age 91, left hemisphere 51.6
Ventrolateral medulla, A1-C1 cell groups
nTPM: 49.8
2741 Female, age 85, both hemispheres 76.3
1986 Male, age 76, both hemispheres 68.9
2180 Male, age 61, both hemispheres 48.7
2302 Female, age 91, both hemispheres 33.0
2118 Male, age 80, both hemispheres 22.1
Ventrolateral tegmental area, A5 NE cell group
nTPM: 61.6
2449 Male, age 74, both hemispheres 102.1
2840 Female, age 85, both hemispheres 79.6
1959 Male, age 76, both hemispheres 62.8
2359 Male, age 61, both hemispheres 52.9
2161 Male, age 80, both hemispheres 50.3
2456 Female, age 91, both hemispheres 21.8

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 115.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 56.3
FF:10182-103D2 60 years, female 61.3
FF:10165-103B3 76 years, female 51.3
Medulla oblongata
Scaled Tags Per Million: 29.4
FF:10038-101F2 18-64 years, mixed 47.2
FF:10155-103A2 76 years, female 23.0
FF:10174-103C3 60 years, female 17.9
Pons
Scaled Tags Per Million: 115.7
FF:10033-101E6 18-54 years, mixed 115.7

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 89.2
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 55.7
Samples: 4

Max nTPM: 71.8
Min nTPM: 31.1
Sample A Female 58.7
Sample B Female 71.8
Sample C Male 61.3
Sample D Male 31.1
Pons
nTPM: 89.2
Samples: 4

Max nTPM: 129.1
Min nTPM: 60.5
Sample A Female 129.1
Sample B Female 60.5
Sample C Male 69.0
Sample D Male 98.3

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 289.4
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 289.4
Samples: 4

Max nTPM: 295.4
Min nTPM: 281.8
Sample A Male 288.7
Sample B Male 291.6
Sample C Female 295.4
Sample D Female 281.8

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 12.2
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 12.2
69113650 Antisense, RP_050316_02_E04, Mouse strain C57BL/6J (56 days, male) 12.2
Pons
Expression energy: 12.0
69113650 Antisense, RP_050316_02_E04, Mouse strain C57BL/6J (56 days, male) 12.0

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