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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
85.1
nTPM
HPA Brain:
127.2
nTPM
GTEx:
85.1
nTPM
FANTOM5:
296.8
Scaled Tags Per Million
Pig:
342.4
nTPM
Mouse:
297.6
nTPM
Allen mouse:
23.7
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
127.2
Sample id
Sample description
nTPM
Amygdala nTPM: 82.9
1987
Female, age 91, left hemisphere
147.7
2814
Male, age 76, right hemisphere
94.9
2517
Female, age 94, left hemisphere
92.7
2514
Male, age 75, right hemisphere
51.6
2695
Female, age 67, right hemisphere
27.5
Basal amygdala nTPM: 97.2
2243
Female, age 91, right hemisphere
159.2
2685
Female, age 94, left hemisphere
125.5
2110
Male, age 80, left hemisphere
89.0
1955
Male, age 76, both hemispheres
86.8
2827
Female, age 67, right hemisphere
77.8
2609
Male, age 75, right hemisphere
44.7
Central amygdala nTPM: 127.2
2701
Female, age 91, right hemisphere
200.8
2826
Female, age 94, left hemisphere
131.9
2239
Male, age 80, left hemisphere
117.7
1905
Male, age 76, both hemispheres
93.7
2515
Male, age 75, right hemisphere
92.1
Corticomedial amygdala nTPM: 98.6
2242
Female, age 91, right hemisphere
171.7
2829
Male, age 80, left hemisphere
111.7
2535
Female, age 67, right hemisphere
101.0
2429
Female, age 94, left hemisphere
92.1
2240
Male, age 76, both hemispheres
73.9
2428
Male, age 75, right hemisphere
41.0
Lateral amygdala nTPM: 91.7
2255
Female, age 91, right hemisphere
168.4
2534
Female, age 94, left hemisphere
136.2
1883
Male, age 76, both hemispheres
90.0
2256
Male, age 80, left hemisphere
78.2
2830
Female, age 67, right hemisphere
45.1
2516
Male, age 75, right hemisphere
32.3
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
85.1
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 85.1
Samples: 152
Max nTPM: 260.6
Min nTPM: 2.3
Std nTPM: 45.3
Median nTPM: 78.8
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
260.6
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
208.1
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
206.6
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
198.7
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
176.1
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
174.0
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
172.0
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
166.2
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
161.7
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
161.1
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
160.5
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
159.3
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
157.6
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
157.6
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
151.8
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
150.6
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
150.4
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
146.2
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
145.3
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
143.5
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
142.1
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
139.0
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
130.7
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
125.1
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
124.4
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
121.5
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
121.3
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
120.0
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
116.5
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
115.6
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
114.7
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
114.6
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
113.6
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
112.5
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
112.2
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
112.1
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
112.0
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
111.5
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
110.1
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
109.9
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
108.6
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
108.2
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
107.0
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
106.2
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
105.2
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
105.2
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
104.9
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
103.1
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
101.9
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
100.0
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
99.0
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
97.0
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
93.0
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
92.9
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
92.1
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
90.9
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
90.8
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
90.3
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
89.8
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
89.8
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
89.3
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
88.0
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
87.4
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
87.1
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
85.6
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
85.6
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
85.5
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
85.1
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
83.8
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
83.4
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
83.1
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
82.9
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
82.5
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
80.5
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
79.9
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
78.9
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
78.8
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
78.0
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
75.6
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
75.5
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
75.1
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
74.9
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
73.9
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
73.5
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
73.3
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
71.6
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
71.5
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
70.8
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
70.7
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
69.9
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
69.8
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
69.4
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
68.0
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
67.7
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
67.6
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
67.1
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
66.7
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
66.6
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
65.3
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
65.3
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
64.3
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
62.3
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
61.5
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
61.3
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
59.9
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
59.8
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
58.5
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
58.3
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
57.6
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
56.9
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
56.6
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
55.6
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
54.5
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
53.8
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
53.7
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
53.3
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
50.7
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
50.6
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
50.0
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
49.6
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
49.4
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
49.0
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
48.9
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
48.7
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
48.1
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
47.4
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
46.9
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
46.6
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
45.5
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
42.6
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
39.8
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
38.7
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
37.8
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
37.2
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
32.0
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
31.9
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
31.2
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
28.8
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
26.7
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
25.2
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
23.7
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
22.5
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
22.4
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
21.7
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
20.8
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
17.1
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
15.3
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
15.3
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
13.9
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
9.9
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
4.5
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
2.3
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
297.6
Mouse sample
Sample description
nTPM
Amygdala nTPM: 297.6
Samples: 4
Max nTPM: 325.5
Min nTPM: 268.8
Sample A
Male
325.5
Sample B
Male
287.2
Sample C
Female
268.8
Sample D
Female
309.0
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
