We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
ADRM1
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • ADRM1
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: High
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:58.6 nTPM
HPA Brain:61.9 nTPM
GTEx:58.6 nTPM
FANTOM5:46.3 Scaled Tags Per Million
Pig:43.8 nTPM
Mouse:58.7 nTPM
Allen mouse:9.1 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA042266
Glial cells High
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

61.9
Sample id Sample description nTPM
Caudate nucleus
nTPM: 53.0
2288 Male, age 75, left hemisphere 57.6
1781 Male, age 74, unknown 57.3
2846 Female, age 79, unknown 57.0
2290 Female, age 72, unknown 53.3
2481 Female, age 94, left hemisphere 51.6
2289 Male, age 61, right hemisphere 51.4
1857 Female, age 85, left hemisphere 48.6
1854 Male, age 80, left hemisphere 47.4
Globus pallidus, externus
nTPM: 61.9
2772 Female, age 79, unknown 68.5
2646 Male, age 61, right hemisphere 65.0
1996 Male, age 80, right hemisphere 63.1
2395 Male, age 75, both hemispheres 60.4
2567 Female, age 72, unknown 52.6
Globus pallidus, internus
nTPM: 60.5
2287 Male, age 75, right hemisphere 71.7
2566 Female, age 72, unknown 59.7
2778 Female, age 91, both hemispheres 59.7
2483 Female, age 94, right hemisphere 59.5
1818 Male, age 74, unknown 59.0
2111 Female, age 85, right hemisphere 57.3
2037 Male, age 80, right hemisphere 56.4
Nucleus accumbens
nTPM: 54.0
2698 Female, age 72, unknown 59.7
1783 Male, age 74, unknown 57.3
1806 Female, age 85, left hemisphere 57.2
1856 Female, age 91, right hemisphere 56.8
2286 Male, age 75, left hemisphere 56.7
2732 Male, age 80, right hemisphere 49.1
2391 Female, age 94, left hemisphere 48.4
2824 Male, age 61, right hemisphere 46.9
Nucleus basalis of Meynert
nTPM: 55.4
2569 Male, age 61, both hemispheres 66.8
2821 Male, age 75, both hemispheres 56.2
2484 Female, age 94, left hemisphere 55.5
2393 Male, age 80, right hemisphere 43.0
Nucleus of the diagonal band
nTPM: 55.5
1812 Female, age 91, both hemispheres 61.3
2195 Female, age 85, both hemispheres 58.7
2775 Male, age 80, right hemisphere 56.8
1979 Male, age 74, unknown 51.0
2029 Male, age 61, right hemisphere 49.9
Putamen
nTPM: 52.6
2647 Male, age 75, left hemisphere 58.5
2466 Female, age 79, unknown 54.2
2482 Female, age 94, left hemisphere 54.2
1937 Female, age 91, right hemisphere 52.1
1829 Male, age 74, unknown 51.7
2489 Female, age 72, unknown 49.7
1838 Male, age 80, right hemisphere 48.0
Septal nuclei
nTPM: 54.6
2031 Female, age 72, unknown 65.3
1960 Male, age 74, unknown 64.4
2629 Female, age 94, right hemisphere 53.9
2059 Female, age 85, both hemispheres 51.9
2009 Female, age 91, both hemispheres 50.5
2394 Male, age 61, left hemisphere 48.6
2199 Male, age 80, right hemisphere 47.4
Stria terminalis, bed nucleus
nTPM: 52.5
1974 Female, age 91, both hemispheres 59.8
2201 Male, age 74, unknown 50.3
2486 Female, age 94, both hemispheres 47.4

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

58.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 51.1
Samples: 246

Max nTPM: 86.7
Min nTPM: 23.1
Std nTPM: 8.9
Median nTPM: 50.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 86.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 81.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 74.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 74.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 70.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 69.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 67.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 67.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 67.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 66.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 66.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 66.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 66.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 65.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 65.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 65.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 65.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 65.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 65.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 64.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 64.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 63.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 63.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 63.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 62.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 62.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 62.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 61.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 61.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 61.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 61.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 60.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 60.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 60.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 59.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 59.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 59.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 59.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 59.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 59.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 59.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 58.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 58.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 58.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 58.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 58.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 58.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 58.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 57.9
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 57.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 57.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 57.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 57.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 56.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 56.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 56.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 56.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 56.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 56.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 56.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 56.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 56.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 56.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 56.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 55.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 55.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 55.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 55.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 55.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 55.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 55.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 55.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 55.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 55.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 55.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 55.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 55.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 54.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 54.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 54.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 54.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 54.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 54.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 54.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 54.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 53.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 53.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 53.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 53.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 53.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 53.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 53.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 53.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 53.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 53.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 52.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 52.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 52.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 52.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 52.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 52.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 52.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 52.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 52.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 52.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 51.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 51.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 51.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 51.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 51.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 51.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 51.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 51.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 51.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 51.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 51.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 50.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 50.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 50.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 50.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 50.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 50.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 50.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 50.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 50.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 49.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 49.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 49.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 49.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 49.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 49.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 49.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 49.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 49.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 49.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 49.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 49.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 49.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 49.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 49.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 49.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 49.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 48.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 48.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 48.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 48.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 48.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 48.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 48.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 48.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 48.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 48.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 48.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 48.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 48.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 48.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 48.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 48.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 47.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 47.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 47.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 47.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 47.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 47.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 47.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 47.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 47.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 47.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 47.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 47.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 47.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 47.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 47.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 47.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 47.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 47.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 47.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 47.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 46.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 46.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 46.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 46.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 46.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 46.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 46.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 46.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 46.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 46.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 45.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 45.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 45.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 45.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 45.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 45.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 44.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 44.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 44.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 44.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 44.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 44.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 44.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 43.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 43.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 43.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 43.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 43.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 43.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 43.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 43.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 43.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 43.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 42.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 42.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 42.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 41.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 41.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 41.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 41.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 41.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 40.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 40.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 40.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 40.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 40.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 40.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 39.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 39.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 38.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 38.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 37.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 37.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 37.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 37.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 36.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 36.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 36.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 35.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 35.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 32.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 32.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 32.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 32.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 31.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 31.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 28.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 23.1
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 53.9
Samples: 246

Max nTPM: 100.9
Min nTPM: 30.2
Std nTPM: 10.2
Median nTPM: 52.5
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 100.9
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 96.1
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 90.1
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 89.0
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 88.6
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 81.3
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 76.6
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 75.8
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 75.1
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 73.9
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 71.3
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 71.3
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 70.5
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 70.3
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 69.9
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 69.0
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 68.8
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 68.2
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 68.1
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 67.8
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 67.7
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 67.7
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 67.0
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 66.7
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 66.6
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 65.6
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 65.2
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 65.1
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 64.8
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 64.4
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 64.4
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 64.4
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 64.4
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 63.9
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 63.8
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 63.6
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 63.0
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 62.9
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 62.6
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 62.4
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 62.4
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 61.7
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 61.5
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 61.0
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 60.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 60.6
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 60.6
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 60.6
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 60.5
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 60.5
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 60.3
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 60.0
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 59.9
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 59.8
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 59.6
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 59.4
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 59.3
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 59.3
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 59.2
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 58.9
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 58.7
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 58.7
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 58.3
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 58.3
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 58.3
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 58.2
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 58.1
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 58.0
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 57.8
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 57.6
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 57.6
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 57.4
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 57.1
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 57.0
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 57.0
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 57.0
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 57.0
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 56.8
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 56.7
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 56.7
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 56.4
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 56.4
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 56.4
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 56.1
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 55.9
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 55.8
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 55.7
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 55.7
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 55.5
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 55.5
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 55.4
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 55.3
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 55.2
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 55.2
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 54.8
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 54.6
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 54.3
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 54.3
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 54.3
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 54.2
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 54.1
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 54.0
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 53.9
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 53.8
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 53.8
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 53.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 53.6
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 53.5
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 53.4
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 53.4
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 53.3
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 53.1
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 53.1
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 53.1
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 53.0
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 52.9
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 52.8
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 52.8
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 52.7
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 52.7
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 52.7
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 52.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 52.5
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 52.4
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 52.4
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 52.3
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 52.3
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 52.2
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 52.1
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 51.8
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 51.7
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 51.7
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 51.6
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 51.6
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 51.6
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 51.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 51.3
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 51.3
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 51.3
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 51.2
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 51.2
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 51.2
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 51.0
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 50.8
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 50.7
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 50.7
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 50.7
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 50.7
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 50.6
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 50.5
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 50.5
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 50.5
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 50.4
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 50.2
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 50.2
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 50.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 50.1
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 50.1
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 50.0
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 49.9
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 49.9
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 49.7
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 49.7
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 49.6
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 49.6
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 49.5
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 49.4
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 49.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 49.4
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 49.3
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 49.3
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 49.3
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 48.9
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 48.8
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 48.8
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 48.8
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 48.7
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 48.7
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 48.6
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 48.3
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 48.3
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 48.2
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 48.2
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 48.1
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 48.0
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 48.0
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 47.9
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 47.9
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 47.8
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 47.6
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 47.2
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 47.1
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 46.8
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 46.8
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 46.7
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 46.5
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 46.4
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 46.4
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 46.3
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 46.3
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 46.2
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 46.2
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 45.9
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 45.7
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 45.6
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 45.2
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 45.1
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 45.1
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 45.0
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 45.0
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 44.9
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 44.9
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 44.9
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 44.9
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 44.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 44.8
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 44.8
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 44.3
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 44.3
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 43.8
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 43.4
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 43.0
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 43.0
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 42.9
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 42.8
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 42.5
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 42.4
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 41.5
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 41.5
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 41.0
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 40.8
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 40.6
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 40.3
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 39.8
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 39.3
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 37.6
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 37.4
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 37.4
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 36.9
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 36.3
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 35.9
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 34.2
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 34.0
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 33.2
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 30.8
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 30.2
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 58.6
Samples: 205

Max nTPM: 119.2
Min nTPM: 34.8
Std nTPM: 9.7
Median nTPM: 57.0
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 119.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 89.1
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 86.4
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 83.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 79.8
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 79.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 78.0
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 76.5
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 76.1
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 75.2
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 74.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 74.0
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 73.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 73.5
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 72.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 72.2
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 71.6
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 71.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 71.4
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 70.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 70.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 69.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 69.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 68.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 68.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 68.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 68.3
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 67.7
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 67.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 67.3
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 67.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 67.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 67.0
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 66.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 66.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 66.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 66.0
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 65.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 65.7
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 65.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 64.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 64.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 64.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 64.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 64.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 64.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 64.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 64.5
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 64.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 64.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 64.0
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 63.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 63.8
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 63.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 63.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 62.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 62.5
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 62.4
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 62.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 62.2
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 62.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 62.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 62.0
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 61.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 61.7
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 61.3
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 61.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 61.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 61.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 60.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 60.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 60.7
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 60.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 60.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 60.4
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 60.4
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 60.3
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 60.0
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 59.9
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 59.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 59.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 59.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 59.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 59.4
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 59.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 59.3
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 59.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 59.2
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 58.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 58.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 58.6
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 58.5
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 58.5
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 58.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 58.4
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 58.1
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 58.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 58.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 57.8
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 57.6
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 57.3
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 57.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 57.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 56.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 56.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 56.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 56.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 56.6
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 56.4
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 56.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 56.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 56.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 56.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 55.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 55.9
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 55.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 55.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 55.6
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 55.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 55.5
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 55.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 55.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 55.4
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 55.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 55.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 55.2
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 55.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 55.1
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 54.9
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 54.6
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 54.6
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 54.4
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 54.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 54.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 54.3
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 54.3
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 54.1
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 54.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 54.0
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 54.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 53.9
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 53.9
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 53.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 53.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 53.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 53.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 53.6
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 53.5
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 53.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 53.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 53.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 53.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 53.1
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 52.9
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 52.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 52.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 52.2
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 52.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 51.9
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 51.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 51.7
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 51.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 51.4
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 51.2
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 51.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 51.1
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 51.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 51.1
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 50.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 50.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 50.6
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 50.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 50.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 50.1
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 49.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 49.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 49.8
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 49.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 49.6
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 49.4
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 49.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 49.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 49.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 48.9
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 48.9
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 48.8
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 48.5
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 48.0
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 48.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 48.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 47.8
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 47.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 45.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 45.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 44.7
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 44.3
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 43.9
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 43.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 43.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 43.1
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 42.6
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 39.4
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 39.2
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 38.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 34.8
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

46.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 36.1
FF:10164-103B2 76 years, female 36.1
Nucleus accumbens
Scaled Tags Per Million: 46.3
FF:10037-101F1 23-56 years, mixed 46.3
Putamen
Scaled Tags Per Million: 40.0
FF:10176-103C5 60 years, female 40.0
Globus pallidus
Scaled Tags Per Million: 32.2
FF:10161-103A8 76 years, female 33.0
FF:10175-103C4 60 years, female 31.3

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

43.8
Pig sample Sample description nTPM
Caudate
nTPM: 41.4
Samples: 4

Max nTPM: 52.3
Min nTPM: 34.4
Sample A Female 35.0
Sample B Female 43.8
Sample C Male 52.3
Sample D Male 34.4
Putamen
nTPM: 43.8
Samples: 4

Max nTPM: 52.7
Min nTPM: 34.4
Sample A Female 41.6
Sample B Female 34.4
Sample C Male 52.7
Sample D Male 46.5
Septum
nTPM: 39.9
Samples: 4

Max nTPM: 46.2
Min nTPM: 33.5
Sample A Female 42.7
Sample B Female 37.2
Sample C Male 46.2
Sample D Male 33.5
Ventral pallidum
nTPM: 40.3
Samples: 4

Max nTPM: 52.2
Min nTPM: 33.4
Sample A Female 33.4
Sample B Female 40.7
Sample C Male 52.2
Sample D Male 35.0

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

58.7
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 52.0
Samples: 4

Max nTPM: 67.8
Min nTPM: 44.0
Sample A Male 51.5
Sample B Male 67.8
Sample C Female 44.7
Sample D Female 44.0
Septum
nTPM: 58.7
Samples: 4

Max nTPM: 64.8
Min nTPM: 52.2
Sample A Male 61.3
Sample B Male 56.3
Sample C Female 64.8
Sample D Female 52.2
Ventral forebrain
nTPM: 51.5
Samples: 4

Max nTPM: 62.5
Min nTPM: 44.3
Sample A Male 51.1
Sample B Male 48.2
Sample C Female 62.5
Sample D Female 44.3

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

9.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 9.1
2019 Antisense, RP_040407_02_A07, Mouse strain C57BL/6J (56 days, male) 9.1
2020 Antisense, RP_040407_02_A07, Mouse strain C57BL/6J (56 days, male) 0.9
Pallidum
Expression energy: 8.4
2019 Antisense, RP_040407_02_A07, Mouse strain C57BL/6J (56 days, male) 8.4
2020 Antisense, RP_040407_02_A07, Mouse strain C57BL/6J (56 days, male) 1.2

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org