HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:44.0 nTPM
HPA Brain:16.5 nTPM
GTEx:44.0 nTPM
FANTOM5:56.4 Scaled Tags Per Million
Pig:11.9 nTPM
Mouse:9.2 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 16.5
Sample id Sample description nTPM
Hippocampus
nTPM: 12.2
1898 Male, age 80, left hemisphere 18.5
2621 Female, age 67, right hemisphere 15.5
1855 Male, age 76, left hemisphere 13.5
2148 Female, age 91, left hemisphere 10.2
1911 Female, age 85, right hemisphere 9.6
2529 Female, age 94, left hemisphere 5.7
Dentate gyrus
nTPM: 13.1
1927 Female, age 91, both hemispheres 17.9
2530 Female, age 94, left hemisphere 15.9
2010 Male, age 76, both hemispheres 15.1
2528 Male, age 74, both hemispheres 11.0
2246 Female, age 85, both hemispheres 10.4
2531 Female, age 67, both hemispheres 8.4
Entorhinal gyrus
nTPM: 7.4
1938 Female, age 85, left hemisphere 9.8
1787 Male, age 76, left hemisphere 9.1
2613 Female, age 94, left hemisphere 7.9
2686 Male, age 75, right hemisphere 6.3
2117 Female, age 91, right hemisphere 5.9
2764 Male, age 80, right hemisphere 5.6
Hippocampus, CA1
nTPM: 16.5
2749 Male, age 80, left hemisphere 31.7
1873 Female, age 85, both hemispheres 21.6
2045 Male, age 76, both hemispheres 11.4
2527 Male, age 74, both hemispheres 9.6
2082 Female, age 91, right hemisphere 8.1
Hippocampus, CA2
nTPM: 14.2
1963 Male, age 80, left hemisphere 32.7
1892 Male, age 76, both hemispheres 25.0
2437 Female, age 94, left hemisphere 7.3
2249 Male, age 74, both hemispheres 7.1
2113 Female, age 91, right hemisphere 6.8
1940 Female, age 85, left hemisphere 6.4
Hippocampus, CA3
nTPM: 10.7
1867 Male, age 76, both hemispheres 13.1
2137 Male, age 80, left hemisphere 12.9
2861 Female, age 67, both hemispheres 11.3
2620 Female, age 94, left hemisphere 10.5
2436 Male, age 74, both hemispheres 8.4
1891 Female, age 85, both hemispheres 7.8
Parahippocampal cortex
nTPM: 6.1
2250 Female, age 67, right hemisphere 9.1
2245 Female, age 91, both hemispheres 9.0
1933 Female, age 85, both hemispheres 8.2
2018 Male, age 76, both hemispheres 6.2
2532 Female, age 72, left hemisphere 5.5
2692 Male, age 74, both hemispheres 5.0
2693 Female, age 94, both hemispheres 4.8
2622 Female, age 67, right hemisphere 4.6
1990 Female, age 91, right hemisphere 4.5
1850 Male, age 80, both hemispheres 4.0
Perirhinal gyrus
nTPM: 7.3
1847 Female, age 91, left hemisphere 10.8
1841 Female, age 85, right hemisphere 7.4
1794 Male, age 80, right hemisphere 6.5
2521 Female, age 94, right hemisphere 6.2
2848 Male, age 76, right hemisphere 5.6
Subiculum
nTPM: 7.3
1977 Female, age 85, both hemispheres 9.9
2729 Female, age 91, right hemisphere 7.2
2438 Female, age 94, left hemisphere 7.1
2042 Male, age 76, both hemispheres 7.0
2619 Male, age 74, both hemispheres 6.6
1901 Male, age 80, both hemispheres 6.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 44.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 44.0
Samples: 197

Max nTPM: 130.6
Min nTPM: 14.5
Std nTPM: 21.6
Median nTPM: 37.0
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 130.6
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 118.2
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 113.8
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 106.5
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 105.9
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 105.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 96.2
GTEX-14E6D-0011-R1b-SM-5YYAW 50-59 years, male 95.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 94.2
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 94.2
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 94.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 56.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 56.4
FF:10169-103B7 60 years, female 73.7
FF:10153-102I9 76 years, female 39.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 11.9
Pig sample Sample description nTPM
Subiculum
nTPM: 10.9
Samples: 4

Max nTPM: 13.7
Min nTPM: 9.6
Sample A Female 13.7
Sample B Female 10.2
Sample C Male 10.0
Sample D Male 9.6
Dorsal hippocampus
nTPM: 9.3
Samples: 4

Max nTPM: 10.0
Min nTPM: 8.7
Sample A Female 10.0
Sample B Female 9.4
Sample C Male 9.1
Sample D Male 8.7
Entorhinal cortex
nTPM: 11.9
Samples: 4

Max nTPM: 12.5
Min nTPM: 11.2
Sample A Female 11.6
Sample B Female 12.5
Sample C Male 11.2
Sample D Male 12.4
Ventral hippocampus
nTPM: 10.3
Samples: 4

Max nTPM: 12.9
Min nTPM: 8.8
Sample A Female 9.8
Sample B Female 8.8
Sample C Male 12.9
Sample D Male 9.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 9.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 8.9
Samples: 4

Max nTPM: 9.7
Min nTPM: 7.3
Sample A Male 7.3
Sample B Male 8.8
Sample C Female 9.6
Sample D Female 9.7
Hippocampal formation
nTPM: 9.3
Samples: 4

Max nTPM: 10.1
Min nTPM: 8.3
Sample A Male 10.1
Sample B Male 9.3
Sample C Female 9.3
Sample D Female 8.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
69080732 Antisense, RP_050324_02_D01, Mouse strain C57BL/6J (56 days, male) 0.6

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