PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:138.0 nTPM
FANTOM5:64.7 Scaled Tags Per Million
Pig:89.9 nTPM
Mouse:158.9 nTPM
Allen mouse:3.0 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 138.0
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 97.1
2301 Female, age 85, both hemispheres 100.4
2188 Female, age 91, both hemispheres 99.9
1984 Male, age 76, both hemispheres 97.0
2090 Male, age 80, both hemispheres 91.2
Area postrema
nTPM: 96.2
2799 Male, age 61, both hemispheres 100.8
2054 Male, age 76, both hemispheres 99.6
2306 Male, age 80, both hemispheres 88.1
Dorsal cochlear nucleus
nTPM: 107.6
2058 Male, age 76, both hemispheres 115.0
2187 Female, age 91, both hemispheres 111.9
2802 Male, age 74, right hemisphere 108.5
2370 Male, age 61, both hemispheres 104.1
2378 Male, age 80, both hemispheres 98.5
Dorsal medullary reticular nucleus
nTPM: 110.5
2040 Female, age 85, both hemispheres 132.9
2373 Male, age 61, both hemispheres 100.9
2088 Male, age 76, both hemispheres 97.7
Dorsal motor vagal complex
nTPM: 111.9
2133 Female, age 91, both hemispheres 131.2
2844 Male, age 55, unknown 126.9
2000 Male, age 74, unknown 122.3
2643 Male, age 74, both hemispheres 121.0
2813 Female, age 72, unknown 120.1
2797 Male, age 61, both hemispheres 100.6
2185 Male, age 76, both hemispheres 98.7
2807 Female, age 85, both hemispheres 74.8
Dorsal tegmental nucleus
nTPM: 122.0
2358 Male, age 61, both hemispheres 146.8
2083 Male, age 80, both hemispheres 131.7
2326 Male, age 74, both hemispheres 107.0
1936 Male, age 76, left hemisphere 102.5
Dorsolateral tegmental area
nTPM: 110.9
2654 Male, age 80, both hemispheres 127.9
2751 Female, age 85, both hemispheres 117.7
2141 Male, age 76, both hemispheres 115.3
2337 Male, age 61, both hemispheres 104.0
2360 Male, age 74, both hemispheres 89.8
Gigantocellular reticular nuclei, medullary
nTPM: 111.3
1876 Female, age 85, both hemispheres 122.8
2310 Male, age 80, both hemispheres 111.3
2462 Male, age 74, both hemispheres 111.2
2022 Male, age 76, right hemisphere 110.3
2314 Male, age 61, both hemispheres 107.4
2387 Female, age 91, both hemispheres 104.6
Gigantocellular reticular nuclei, pars
nTPM: 112.4
2084 Female, age 85, both hemispheres 135.0
2336 Male, age 61, both hemispheres 120.7
2168 Male, age 76, both hemispheres 120.4
2330 Male, age 80, both hemispheres 98.4
2706 Male, age 80, both hemispheres 87.6
Inferior olive
nTPM: 100.5
2563 Male, age 74, both hemispheres 106.0
2628 Female, age 91, both hemispheres 105.8
2178 Male, age 61, both hemispheres 105.1
2085 Female, age 85, both hemispheres 101.3
2379 Male, age 80, both hemispheres 84.2
Kolliker-Fuse nucleus
nTPM: 117.9
2163 Male, age 80, both hemispheres 134.8
2793 Female, age 91, left hemisphere 114.2
2315 Male, age 76, right hemisphere 104.6
Lateral lemniscal nuclei
nTPM: 113.3
2169 Male, age 76, both hemispheres 127.6
2453 Male, age 74, right hemisphere 118.6
2036 Male, age 80, both hemispheres 114.3
2746 Female, age 85, left hemisphere 104.3
2320 Female, age 91, left hemisphere 101.7
Lateral medullary reticular nucleus
nTPM: 103.0
2044 Male, age 76, both hemispheres 121.3
2374 Male, age 61, both hemispheres 109.7
2804 Female, age 91, both hemispheres 102.0
2852 Male, age 80, both hemispheres 101.6
2190 Female, age 85, both hemispheres 99.2
2305 Male, age 74, both hemispheres 83.9
Lateral parabrachial nucleus
nTPM: 103.4
2139 Female, age 85, right hemisphere 113.6
2013 Male, age 80, both hemispheres 103.2
2790 Male, age 61, both hemispheres 102.2
2792 Male, age 76, both hemispheres 94.6
Lateral vestibular nucleus
nTPM: 119.0
2184 Male, age 76, both hemispheres 122.2
2311 Male, age 80, both hemispheres 115.9
Locus coeruleus
nTPM: 138.0
2123 Female, age 91, both hemispheres 152.2
2720 Male, age 74, both hemispheres 144.0
2014 Male, age 55, unknown 142.5
1980 Male, age 76, both hemispheres 137.7
2162 Male, age 80, both hemispheres 136.6
2317 Female, age 72, unknown 128.1
2788 Male, age 74, unknown 125.0
Medial olivary nucleus
nTPM: 90.5
2851 Male, age 80, both hemispheres 101.6
2138 Female, age 91, both hemispheres 88.0
1962 Male, age 76, both hemispheres 86.7
1943 Male, age 61, both hemispheres 85.6
Medial parabrachial nucleus
nTPM: 122.2
2170 Female, age 91, both hemispheres 141.2
2156 Male, age 61, both hemispheres 124.0
2854 Male, age 80, both hemispheres 119.7
2786 Male, age 76, both hemispheres 113.5
2463 Female, age 85, right hemisphere 112.5
Medial periolivary nuclei
nTPM: 102.9
2171 Female, age 85, both hemispheres 134.8
2063 Male, age 76, both hemispheres 118.6
2458 Female, age 91, both hemispheres 92.5
2791 Male, age 74, right hemisphere 89.9
2081 Male, age 80, both hemispheres 78.6
Medial vestibular nucleus
nTPM: 117.5
2624 Male, age 61, both hemispheres 127.6
2134 Male, age 76, both hemispheres 123.4
2801 Male, age 74, both hemispheres 116.8
2803 Female, age 91, both hemispheres 115.4
2743 Female, age 85, both hemispheres 111.0
2093 Male, age 80, both hemispheres 110.7
Motor facial nucleus
nTPM: 109.0
2062 Male, age 76, both hemispheres 129.6
2365 Male, age 74, right hemisphere 109.5
2697 Female, age 85, both hemispheres 109.5
2795 Female, age 91, both hemispheres 108.3
2327 Male, age 80, both hemispheres 100.1
2126 Male, age 61, both hemispheres 97.0
Motor hypoglossal nucleus
nTPM: 124.1
2461 Male, age 61, both hemispheres 138.3
2125 Female, age 91, both hemispheres 128.5
2182 Male, age 80, both hemispheres 124.8
2132 Female, age 85, both hemispheres 122.2
2277 Male, age 76, both hemispheres 106.8
Motor trigeminal nucleus
nTPM: 108.6
2335 Male, age 61, both hemispheres 121.9
2309 Male, age 76, both hemispheres 116.7
2560 Male, age 74, both hemispheres 112.0
2079 Male, age 80, both hemispheres 98.8
2321 Female, age 91, both hemispheres 93.3
Nuclei of the trapezoid body
nTPM: 112.6
2735 Female, age 85, both hemispheres 127.8
2159 Male, age 61, both hemispheres 126.3
1983 Male, age 76, both hemispheres 121.4
2166 Male, age 80, both hemispheres 94.7
2368 Female, age 91, both hemispheres 92.8
Nucleus ambiguus
nTPM: 108.5
2096 Female, age 85, both hemispheres 128.7
2071 Male, age 76, both hemispheres 88.4
Nucleus cuneatus
nTPM: 94.7
2562 Male, age 61, both hemispheres 114.1
2131 Male, age 76, both hemispheres 112.0
2564 Male, age 74, both hemispheres 103.1
2376 Male, age 61, both hemispheres 100.4
2805 Female, age 91, both hemispheres 99.7
2100 Male, age 76, both hemispheres 95.6
2381 Male, age 80, both hemispheres 82.3
2380 Male, age 80, both hemispheres 73.8
2808 Female, age 85, both hemispheres 71.4
Nucleus gracilis
nTPM: 84.7
2627 Male, age 74, both hemispheres 95.7
2382 Male, age 80, both hemispheres 87.3
2299 Female, age 85, both hemispheres 71.0
Nucleus raphe magnus
nTPM: 115.9
2172 Female, age 85, both hemispheres 138.5
2160 Male, age 61, both hemispheres 134.2
2455 Male, age 74, both hemispheres 113.5
2051 Male, age 76, both hemispheres 110.4
2328 Male, age 80, both hemispheres 108.7
2459 Female, age 91, both hemispheres 90.4
Nucleus raphe obscurus
nTPM: 91.9
2845 Female, age 85, midline 99.1
2800 Male, age 61, midline 97.5
2142 Male, age 76, midline 79.2
Nucleus raphe pallidus
nTPM: 107.1
2183 Male, age 80, midline 129.0
1924 Male, age 61, midline 108.7
2145 Male, age 76, midline 83.4
Nucleus tractus solitarii
nTPM: 102.6
2656 Male, age 76, both hemispheres 127.0
2307 Male, age 80, both hemispheres 97.3
2144 Female, age 91, right hemisphere 93.4
2191 Female, age 85, both hemispheres 92.8
Paramedian reticular nucleus
nTPM: 113.3
2313 Male, age 61, both hemispheres 121.4
2050 Female, age 85, both hemispheres 120.2
2057 Male, age 80, both hemispheres 115.2
2052 Male, age 76, both hemispheres 96.4
Parvicellular reticular nuclei
nTPM: 111.8
2119 Male, age 80, both hemispheres 115.7
2095 Male, age 76, both hemispheres 110.3
2558 Male, age 74, both hemispheres 109.3
Parvicellular reticular nuclei, medullary
nTPM: 127.0
2189 Female, age 91, both hemispheres 136.1
2181 Male, age 80, left hemisphere 124.4
2091 Female, age 85, both hemispheres 120.6
Pedunculopontine tegmental nucleus
nTPM: 121.9
2334 Male, age 80, both hemispheres 135.9
1921 Female, age 85, both hemispheres 119.6
2338 Male, age 61, both hemispheres 110.1
Peritrigeminal nucleus
nTPM: 109.8
2067 Female, age 85, both hemispheres 112.1
2136 Male, age 76, both hemispheres 110.5
2179 Male, age 61, both hemispheres 106.7
Pontine nuclei
nTPM: 120.7
2787 Female, age 85, both hemispheres 173.5
1863 Male, age 55, unknown 145.8
1968 Male, age 76, left hemisphere 121.0
2727 Male, age 61, right hemisphere 116.6
2109 Female, age 72, unknown 116.0
2454 Male, age 74, left hemisphere 101.1
2319 Female, age 91, both hemispheres 100.3
2115 Male, age 80, left hemisphere 91.2
Pontine raphe nucleus
nTPM: 126.9
2122 Female, age 85, midline 127.9
2853 Male, age 76, midline 125.8
Posteroventral cochlear nucleus
nTPM: 101.9
2752 Female, age 85, both hemispheres 120.7
2070 Male, age 76, both hemispheres 113.8
2371 Male, age 61, both hemispheres 101.6
2341 Male, age 80, both hemispheres 92.6
2135 Female, age 91, both hemispheres 80.9
Prepositus hypoglossal nucleus
nTPM: 106.8
2086 Male, age 80, both hemispheres 109.8
2855 Female, age 85, right hemisphere 103.8
Principal sensory trigeminal nucleus
nTPM: 112.8
2158 Male, age 61, both hemispheres 135.7
2324 Male, age 76, both hemispheres 123.2
2008 Male, age 80, left hemisphere 98.2
2367 Female, age 91, left hemisphere 94.0
Reticular pontine nucleus, caudal
nTPM: 110.7
2092 Male, age 76, both hemispheres 113.3
2332 Male, age 80, right hemisphere 113.2
2559 Male, age 74, both hemispheres 110.0
2457 Female, age 91, both hemispheres 106.3
Reticular pontine nucleus, oral
nTPM: 113.1
2167 Male, age 76, both hemispheres 127.4
1939 Male, age 80, both hemispheres 121.8
2012 Female, age 85, both hemispheres 113.1
2366 Female, age 91, both hemispheres 109.4
2361 Male, age 74, both hemispheres 93.7
Reticulotegmental nucleus
nTPM: 116.8
2452 Male, age 74, both hemispheres 121.0
2322 Female, age 91, both hemispheres 117.5
2333 Male, age 80, both hemispheres 114.7
2325 Male, age 76, both hemispheres 114.1
Spinal trigeminal nucleus, caudal
nTPM: 111.8
2390 Female, age 91, both hemispheres 130.2
2447 Male, age 76, both hemispheres 116.8
2642 Male, age 74, both hemispheres 108.0
2308 Male, age 80, both hemispheres 102.7
2312 Male, age 61, both hemispheres 101.0
Spinal trigeminal nucleus, interpolar
nTPM: 122.2
2066 Male, age 76, right hemisphere 140.8
2625 Male, age 61, both hemispheres 135.7
2033 Male, age 80, both hemispheres 121.2
2389 Female, age 91, both hemispheres 106.6
2386 Female, age 85, both hemispheres 106.5
Spinal trigeminal nucleus, oral
nTPM: 117.7
2737 Female, age 85, both hemispheres 119.5
1978 Male, age 76, both hemispheres 117.0
2164 Male, age 80, both hemispheres 116.5
Spinal vestibular nucleus
nTPM: 117.3
2780 Male, age 80, both hemispheres 128.7
2748 Male, age 76, both hemispheres 122.3
2186 Female, age 91, both hemispheres 122.1
2796 Male, age 61, both hemispheres 118.2
2806 Female, age 85, both hemispheres 111.5
2384 Male, age 74, both hemispheres 101.3
Subcoeruleus area
nTPM: 118.1
2323 Female, age 91, left hemisphere 149.3
2451 Male, age 74, both hemispheres 125.5
1958 Male, age 80, both hemispheres 119.2
2369 Female, age 85, left hemisphere 101.8
2089 Male, age 76, left hemisphere 94.7
Superior olive
nTPM: 104.1
1875 Female, age 85, both hemispheres 122.8
2020 Male, age 76, both hemispheres 106.7
2329 Male, age 80, right hemisphere 102.1
2364 Male, age 74, right hemisphere 100.3
2561 Female, age 91, both hemispheres 88.7
Superior vestibular nucleus
nTPM: 104.9
2061 Male, age 76, both hemispheres 111.7
2015 Male, age 80, both hemispheres 108.1
2383 Male, age 74, both hemispheres 94.8
Ventral medullary reticular nucleus
nTPM: 108.2
2060 Male, age 76, both hemispheres 118.7
2372 Male, age 61, both hemispheres 97.7
Ventral periolivary nuclei
nTPM: 111.7
2130 Female, age 85, both hemispheres 137.2
2165 Male, age 80, both hemispheres 121.2
2023 Male, age 76, both hemispheres 97.5
2794 Female, age 91, left hemisphere 90.9
Ventrolateral medulla, A1-C1 cell groups
nTPM: 110.1
2741 Female, age 85, both hemispheres 119.3
1986 Male, age 76, both hemispheres 119.2
2180 Male, age 61, both hemispheres 113.0
2302 Female, age 91, both hemispheres 109.4
2118 Male, age 80, both hemispheres 89.7
Ventrolateral tegmental area, A5 NE cell group
nTPM: 110.8
2840 Female, age 85, both hemispheres 127.8
2359 Male, age 61, both hemispheres 117.8
2449 Male, age 74, both hemispheres 114.8
1959 Male, age 76, both hemispheres 103.3
2161 Male, age 80, both hemispheres 102.2
2456 Female, age 91, both hemispheres 98.7

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 64.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 56.3
FF:10182-103D2 60 years, female 57.5
FF:10165-103B3 76 years, female 55.1
Medulla oblongata
Scaled Tags Per Million: 36.6
FF:10038-101F2 18-64 years, mixed 47.4
FF:10155-103A2 76 years, female 35.3
FF:10174-103C3 60 years, female 27.3
Pons
Scaled Tags Per Million: 64.7
FF:10033-101E6 18-54 years, mixed 64.7

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 89.9
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 65.5
Samples: 4

Max nTPM: 82.5
Min nTPM: 54.5
Sample A Female 54.5
Sample B Female 65.3
Sample C Male 82.5
Sample D Male 59.7
Pons
nTPM: 89.9
Samples: 4

Max nTPM: 99.0
Min nTPM: 74.3
Sample A Female 97.5
Sample B Female 74.3
Sample C Male 99.0
Sample D Male 88.8

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 158.9
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 158.9
Samples: 4

Max nTPM: 179.4
Min nTPM: 145.1
Sample A Male 160.1
Sample B Male 179.4
Sample C Female 145.1
Sample D Female 150.8

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 3.0
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 3.0
69028246 Antisense, RP_050315_01_G07, Mouse strain C57BL/6J (56 days, male) 3.0
Pons
Expression energy: 2.6
69028246 Antisense, RP_050315_01_G07, Mouse strain C57BL/6J (56 days, male) 2.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org