PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:115.6 nTPM
FANTOM5:43.6 Scaled Tags Per Million
Pig:62.1 nTPM
Mouse:38.7 nTPM
Allen mouse:1.2 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 115.6
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 98.2
2090 Male, age 80, both hemispheres 116.7
2188 Female, age 91, both hemispheres 98.6
1984 Male, age 76, both hemispheres 97.1
2301 Female, age 85, both hemispheres 80.5
Area postrema
nTPM: 108.5
2799 Male, age 61, both hemispheres 118.7
2306 Male, age 80, both hemispheres 118.1
2054 Male, age 76, both hemispheres 88.9
Dorsal cochlear nucleus
nTPM: 103.3
2370 Male, age 61, both hemispheres 110.0
2058 Male, age 76, both hemispheres 104.3
2378 Male, age 80, both hemispheres 102.2
2802 Male, age 74, right hemisphere 100.5
2187 Female, age 91, both hemispheres 99.6
Dorsal medullary reticular nucleus
nTPM: 88.3
2088 Male, age 76, both hemispheres 89.1
2040 Female, age 85, both hemispheres 89.0
2373 Male, age 61, both hemispheres 86.8
Dorsal motor vagal complex
nTPM: 93.9
2185 Male, age 76, both hemispheres 108.6
2643 Male, age 74, both hemispheres 107.7
2797 Male, age 61, both hemispheres 100.5
2844 Male, age 55, unknown 96.5
2133 Female, age 91, both hemispheres 94.1
2000 Male, age 74, unknown 89.6
2813 Female, age 72, unknown 78.5
2807 Female, age 85, both hemispheres 75.6
Dorsal tegmental nucleus
nTPM: 97.0
2326 Male, age 74, both hemispheres 105.0
2083 Male, age 80, both hemispheres 101.6
2358 Male, age 61, both hemispheres 94.7
1936 Male, age 76, left hemisphere 86.8
Dorsolateral tegmental area
nTPM: 97.1
2751 Female, age 85, both hemispheres 102.8
2654 Male, age 80, both hemispheres 102.0
2337 Male, age 61, both hemispheres 97.3
2360 Male, age 74, both hemispheres 96.1
2141 Male, age 76, both hemispheres 87.1
Gigantocellular reticular nuclei, medullary
nTPM: 101.0
2314 Male, age 61, both hemispheres 110.6
2462 Male, age 74, both hemispheres 106.6
2387 Female, age 91, both hemispheres 101.9
2310 Male, age 80, both hemispheres 99.9
1876 Female, age 85, both hemispheres 98.1
2022 Male, age 76, right hemisphere 89.2
Gigantocellular reticular nuclei, pars
nTPM: 91.3
2168 Male, age 76, both hemispheres 94.8
2706 Male, age 80, both hemispheres 93.7
2336 Male, age 61, both hemispheres 91.5
2330 Male, age 80, both hemispheres 89.0
2084 Female, age 85, both hemispheres 87.7
Inferior olive
nTPM: 105.2
2563 Male, age 74, both hemispheres 114.1
2178 Male, age 61, both hemispheres 108.9
2379 Male, age 80, both hemispheres 105.7
2085 Female, age 85, both hemispheres 104.8
2628 Female, age 91, both hemispheres 92.7
Kolliker-Fuse nucleus
nTPM: 96.4
2315 Male, age 76, right hemisphere 98.6
2793 Female, age 91, left hemisphere 98.6
2163 Male, age 80, both hemispheres 92.0
Lateral lemniscal nuclei
nTPM: 99.7
2036 Male, age 80, both hemispheres 112.4
2746 Female, age 85, left hemisphere 106.2
2320 Female, age 91, left hemisphere 97.0
2169 Male, age 76, both hemispheres 91.9
2453 Male, age 74, right hemisphere 90.9
Lateral medullary reticular nucleus
nTPM: 101.9
2852 Male, age 80, both hemispheres 122.1
2305 Male, age 74, both hemispheres 104.5
2804 Female, age 91, both hemispheres 102.8
2190 Female, age 85, both hemispheres 102.7
2044 Male, age 76, both hemispheres 92.4
2374 Male, age 61, both hemispheres 86.9
Lateral parabrachial nucleus
nTPM: 100.4
2013 Male, age 80, both hemispheres 102.4
2139 Female, age 85, right hemisphere 101.6
2792 Male, age 76, both hemispheres 101.6
2790 Male, age 61, both hemispheres 96.0
Lateral vestibular nucleus
nTPM: 92.5
2311 Male, age 80, both hemispheres 96.8
2184 Male, age 76, both hemispheres 88.2
Locus coeruleus
nTPM: 85.2
2317 Female, age 72, unknown 92.6
2014 Male, age 55, unknown 90.9
2123 Female, age 91, both hemispheres 90.5
2162 Male, age 80, both hemispheres 89.7
1980 Male, age 76, both hemispheres 79.3
2720 Male, age 74, both hemispheres 78.0
2788 Male, age 74, unknown 74.9
Medial olivary nucleus
nTPM: 115.6
2138 Female, age 91, both hemispheres 137.8
1943 Male, age 61, both hemispheres 119.9
1962 Male, age 76, both hemispheres 103.4
2851 Male, age 80, both hemispheres 101.2
Medial parabrachial nucleus
nTPM: 100.4
2463 Female, age 85, right hemisphere 115.2
2170 Female, age 91, both hemispheres 105.3
2156 Male, age 61, both hemispheres 99.0
2854 Male, age 80, both hemispheres 92.1
2786 Male, age 76, both hemispheres 90.6
Medial periolivary nuclei
nTPM: 99.5
2081 Male, age 80, both hemispheres 113.2
2063 Male, age 76, both hemispheres 104.6
2791 Male, age 74, right hemisphere 100.1
2171 Female, age 85, both hemispheres 90.2
2458 Female, age 91, both hemispheres 89.2
Medial vestibular nucleus
nTPM: 86.5
2803 Female, age 91, both hemispheres 89.9
2801 Male, age 74, both hemispheres 89.8
2624 Male, age 61, both hemispheres 88.1
2743 Female, age 85, both hemispheres 85.6
2093 Male, age 80, both hemispheres 85.2
2134 Male, age 76, both hemispheres 80.4
Motor facial nucleus
nTPM: 92.8
2062 Male, age 76, both hemispheres 101.1
2126 Male, age 61, both hemispheres 99.4
2795 Female, age 91, both hemispheres 98.9
2365 Male, age 74, right hemisphere 94.6
2697 Female, age 85, both hemispheres 82.2
2327 Male, age 80, both hemispheres 80.7
Motor hypoglossal nucleus
nTPM: 86.0
2125 Female, age 91, both hemispheres 96.6
2182 Male, age 80, both hemispheres 95.4
2277 Male, age 76, both hemispheres 90.4
2132 Female, age 85, both hemispheres 89.4
2461 Male, age 61, both hemispheres 58.3
Motor trigeminal nucleus
nTPM: 97.8
2560 Male, age 74, both hemispheres 110.4
2079 Male, age 80, both hemispheres 97.6
2335 Male, age 61, both hemispheres 96.2
2321 Female, age 91, both hemispheres 94.3
2309 Male, age 76, both hemispheres 90.4
Nuclei of the trapezoid body
nTPM: 96.6
2368 Female, age 91, both hemispheres 103.5
2735 Female, age 85, both hemispheres 97.9
1983 Male, age 76, both hemispheres 96.8
2159 Male, age 61, both hemispheres 93.2
2166 Male, age 80, both hemispheres 91.7
Nucleus ambiguus
nTPM: 109.8
2071 Male, age 76, both hemispheres 110.4
2096 Female, age 85, both hemispheres 109.2
Nucleus cuneatus
nTPM: 100.6
2564 Male, age 74, both hemispheres 114.8
2376 Male, age 61, both hemispheres 107.3
2380 Male, age 80, both hemispheres 107.2
2100 Male, age 76, both hemispheres 105.2
2562 Male, age 61, both hemispheres 102.9
2131 Male, age 76, both hemispheres 97.1
2805 Female, age 91, both hemispheres 90.7
2381 Male, age 80, both hemispheres 90.5
2808 Female, age 85, both hemispheres 89.8
Nucleus gracilis
nTPM: 102.4
2382 Male, age 80, both hemispheres 106.6
2299 Female, age 85, both hemispheres 104.3
2627 Male, age 74, both hemispheres 96.3
Nucleus raphe magnus
nTPM: 95.0
2459 Female, age 91, both hemispheres 102.8
2051 Male, age 76, both hemispheres 97.0
2172 Female, age 85, both hemispheres 95.3
2455 Male, age 74, both hemispheres 95.3
2328 Male, age 80, both hemispheres 91.4
2160 Male, age 61, both hemispheres 88.0
Nucleus raphe obscurus
nTPM: 104.3
2142 Male, age 76, midline 114.9
2845 Female, age 85, midline 99.8
2800 Male, age 61, midline 98.1
Nucleus raphe pallidus
nTPM: 110.0
1924 Male, age 61, midline 118.0
2145 Male, age 76, midline 111.9
2183 Male, age 80, midline 100.0
Nucleus tractus solitarii
nTPM: 85.5
2656 Male, age 76, both hemispheres 99.1
2307 Male, age 80, both hemispheres 87.8
2191 Female, age 85, both hemispheres 84.2
2144 Female, age 91, right hemisphere 70.8
Paramedian reticular nucleus
nTPM: 88.3
2057 Male, age 80, both hemispheres 97.2
2050 Female, age 85, both hemispheres 91.3
2313 Male, age 61, both hemispheres 90.7
2052 Male, age 76, both hemispheres 73.8
Parvicellular reticular nuclei
nTPM: 101.6
2119 Male, age 80, both hemispheres 103.8
2558 Male, age 74, both hemispheres 103.6
2095 Male, age 76, both hemispheres 97.4
Parvicellular reticular nuclei, medullary
nTPM: 91.6
2189 Female, age 91, both hemispheres 97.3
2181 Male, age 80, left hemisphere 91.8
2091 Female, age 85, both hemispheres 85.9
Pedunculopontine tegmental nucleus
nTPM: 88.2
1921 Female, age 85, both hemispheres 91.3
2334 Male, age 80, both hemispheres 89.6
2338 Male, age 61, both hemispheres 83.7
Peritrigeminal nucleus
nTPM: 97.5
2067 Female, age 85, both hemispheres 101.5
2136 Male, age 76, both hemispheres 100.7
2179 Male, age 61, both hemispheres 90.5
Pontine nuclei
nTPM: 107.7
2787 Female, age 85, both hemispheres 132.8
1863 Male, age 55, unknown 116.6
1968 Male, age 76, left hemisphere 110.3
2109 Female, age 72, unknown 105.0
2454 Male, age 74, left hemisphere 103.5
2319 Female, age 91, both hemispheres 103.2
2115 Male, age 80, left hemisphere 100.5
2727 Male, age 61, right hemisphere 89.3
Pontine raphe nucleus
nTPM: 104.5
2122 Female, age 85, midline 124.5
2853 Male, age 76, midline 84.5
Posteroventral cochlear nucleus
nTPM: 100.7
2135 Female, age 91, both hemispheres 110.7
2371 Male, age 61, both hemispheres 107.1
2341 Male, age 80, both hemispheres 99.6
2752 Female, age 85, both hemispheres 94.1
2070 Male, age 76, both hemispheres 92.0
Prepositus hypoglossal nucleus
nTPM: 92.6
2086 Male, age 80, both hemispheres 95.6
2855 Female, age 85, right hemisphere 89.6
Principal sensory trigeminal nucleus
nTPM: 87.6
2367 Female, age 91, left hemisphere 97.2
2008 Male, age 80, left hemisphere 87.7
2324 Male, age 76, both hemispheres 82.9
2158 Male, age 61, both hemispheres 82.6
Reticular pontine nucleus, caudal
nTPM: 99.5
2559 Male, age 74, both hemispheres 102.5
2457 Female, age 91, both hemispheres 102.0
2092 Male, age 76, both hemispheres 98.6
2332 Male, age 80, right hemisphere 95.0
Reticular pontine nucleus, oral
nTPM: 100.4
2361 Male, age 74, both hemispheres 116.4
2012 Female, age 85, both hemispheres 100.0
1939 Male, age 80, both hemispheres 99.5
2366 Female, age 91, both hemispheres 96.4
2167 Male, age 76, both hemispheres 89.6
Reticulotegmental nucleus
nTPM: 92.0
2452 Male, age 74, both hemispheres 102.1
2333 Male, age 80, both hemispheres 95.0
2322 Female, age 91, both hemispheres 91.1
2325 Male, age 76, both hemispheres 80.0
Spinal trigeminal nucleus, caudal
nTPM: 94.3
2642 Male, age 74, both hemispheres 102.0
2447 Male, age 76, both hemispheres 99.3
2308 Male, age 80, both hemispheres 95.9
2312 Male, age 61, both hemispheres 91.6
2390 Female, age 91, both hemispheres 82.9
Spinal trigeminal nucleus, interpolar
nTPM: 89.8
2066 Male, age 76, right hemisphere 98.0
2386 Female, age 85, both hemispheres 94.7
2033 Male, age 80, both hemispheres 91.6
2389 Female, age 91, both hemispheres 84.7
2625 Male, age 61, both hemispheres 79.9
Spinal trigeminal nucleus, oral
nTPM: 92.7
1978 Male, age 76, both hemispheres 97.0
2164 Male, age 80, both hemispheres 94.2
2737 Female, age 85, both hemispheres 87.1
Spinal vestibular nucleus
nTPM: 95.0
2384 Male, age 74, both hemispheres 102.6
2186 Female, age 91, both hemispheres 100.7
2780 Male, age 80, both hemispheres 97.5
2748 Male, age 76, both hemispheres 96.3
2806 Female, age 85, both hemispheres 86.7
2796 Male, age 61, both hemispheres 86.3
Subcoeruleus area
nTPM: 97.5
2369 Female, age 85, left hemisphere 107.8
2451 Male, age 74, both hemispheres 102.6
2089 Male, age 76, left hemisphere 99.8
2323 Female, age 91, left hemisphere 93.8
1958 Male, age 80, both hemispheres 83.1
Superior olive
nTPM: 98.7
2020 Male, age 76, both hemispheres 109.1
1875 Female, age 85, both hemispheres 101.7
2364 Male, age 74, right hemisphere 96.9
2561 Female, age 91, both hemispheres 93.7
2329 Male, age 80, right hemisphere 92.1
Superior vestibular nucleus
nTPM: 96.1
2383 Male, age 74, both hemispheres 96.7
2015 Male, age 80, both hemispheres 96.1
2061 Male, age 76, both hemispheres 95.4
Ventral medullary reticular nucleus
nTPM: 101.2
2372 Male, age 61, both hemispheres 103.6
2060 Male, age 76, both hemispheres 98.8
Ventral periolivary nuclei
nTPM: 93.1
2023 Male, age 76, both hemispheres 104.4
2130 Female, age 85, both hemispheres 96.4
2165 Male, age 80, both hemispheres 88.3
2794 Female, age 91, left hemisphere 83.4
Ventrolateral medulla, A1-C1 cell groups
nTPM: 100.4
2180 Male, age 61, both hemispheres 105.2
2118 Male, age 80, both hemispheres 103.3
2302 Female, age 91, both hemispheres 101.1
1986 Male, age 76, both hemispheres 100.6
2741 Female, age 85, both hemispheres 91.8
Ventrolateral tegmental area, A5 NE cell group
nTPM: 95.0
2456 Female, age 91, both hemispheres 108.9
2161 Male, age 80, both hemispheres 102.2
1959 Male, age 76, both hemispheres 97.5
2449 Male, age 74, both hemispheres 92.7
2840 Female, age 85, both hemispheres 88.3
2359 Male, age 61, both hemispheres 80.5

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 43.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 43.6
FF:10165-103B3 76 years, female 58.2
FF:10182-103D2 60 years, female 29.1
Medulla oblongata
Scaled Tags Per Million: 39.9
FF:10155-103A2 76 years, female 52.6
FF:10038-101F2 18-64 years, mixed 40.5
FF:10174-103C3 60 years, female 26.5
Pons
Scaled Tags Per Million: 34.0
FF:10033-101E6 18-54 years, mixed 34.0

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 62.1
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 59.8
Samples: 4

Max nTPM: 64.7
Min nTPM: 54.4
Sample A Female 57.1
Sample B Female 54.4
Sample C Male 63.0
Sample D Male 64.7
Pons
nTPM: 62.1
Samples: 4

Max nTPM: 77.4
Min nTPM: 52.7
Sample A Female 77.4
Sample B Female 52.7
Sample C Male 57.4
Sample D Male 60.7

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 38.7
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 38.7
Samples: 4

Max nTPM: 39.4
Min nTPM: 37.9
Sample A Male 38.8
Sample B Male 38.7
Sample C Female 39.4
Sample D Female 37.9

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 1.2
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 1.2
1071 Antisense, RP_Baylor_103076, Mouse strain C57BL/6J (56 days, male) 2.2
1073 Sense, RPS_Baylor_37059, Mouse strain C57BL/6J (56 days, male) 0.2
Pons
Expression energy: 0.8
1071 Antisense, RP_Baylor_103076, Mouse strain C57BL/6J (56 days, male) 1.2
1073 Sense, RPS_Baylor_37059, Mouse strain C57BL/6J (56 days, male) 0.4

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