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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
38.2
nTPM
GTEx:
38.2
nTPM
FANTOM5:
51.8
Scaled Tags Per Million
Pig:
38.2
nTPM
Mouse:
86.4
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
38.2
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 38.2
Samples: 105
Max nTPM: 105.9
Min nTPM: 4.5
Std nTPM: 19.1
Median nTPM:
218_1
71 years, female
105.9
356_1
87 years, female
85.4
353_1
82 years, female
78.2
350_1
84 years, female
71.8
355_1
70 years, female
71.8
354_1
81 years, female
66.3
163_1
78 years, male
65.7
351_1
91 years, male
65.0
452_1
88 years, female
64.7
293_1
68 years, female
64.2
349_1
83 years, male
62.9
352_1
62 years, male
61.9
177_1
74 years, male
60.9
317_1
60 years, male
60.5
319_1
81 years, male
60.4
377_1
82 years, female
60.2
292_1
71 years, male
60.1
295_1
61 years, female
59.5
394_1
75 years, female
57.7
386_1
76 years, male
57.6
506_1
65 years, male
57.6
173_1
67 years, male
57.1
335_1
73 years, female
53.6
99_1
64 years, male
53.4
243_1
75 years, male
53.3
425_1
59 years, female
51.5
376_1
75 years, female
51.2
172_1
72 years, female
51.1
384_1
83 years, male
50.2
321_1
62 years, female
49.9
406_1
79 years, male
49.5
347_1
72 years, male
49.4
503_1
68 years, male
49.3
318_1
68 years, male
49.2
320_1
89 years, female
48.8
379_1
60 years, male
47.0
404_1
82 years, female
46.6
447_1
81 years, male
46.1
480_1
63 years, male
45.5
189_1
76 years, male
45.3
251_1
78 years, male
44.3
264_1
73 years, female
43.5
405_1
91 years, male
43.0
291_1
76 years, male
42.0
237_1
82 years, male
41.9
246_1
77 years, male
39.7
526_1
61 years, male
38.2
286_1
68 years, female
37.7
389_1
86 years, female
36.5
348_1
84 years, male
36.3
322_1
76 years, male
36.1
375_1
74 years, female
34.9
517_1
88 years, male
34.8
153_1
70 years, female
34.5
229_1
69 years, female
33.7
311_1
78 years, male
32.5
316_1
62 years, male
32.0
266_1
85 years, male
31.8
254_1
77 years, female
30.8
6_1
73 years, female
30.7
120_1
70 years, female
30.3
115_1
83 years, male
29.6
324_1
76 years, male
28.2
396_1
62 years, male
28.2
468_1
89 years, male
27.8
499_1
55 years, female
27.7
18_1
88 years, male
27.5
41_1
94 years, female
27.5
288_1
66 years, female
27.3
145_1
84 years, male
26.7
265_1
87 years, male
26.7
308_1
70 years, female
26.7
17_1
71 years, male
26.4
35_1
74 years, female
26.0
307_1
66 years, female
26.0
137_1
83 years, male
25.3
313_1
79 years, female
24.7
518_1
75 years, female
24.0
314_1
67 years, male
23.6
4_1
88 years, female
22.8
109_1
81 years, female
22.7
117_1
61 years, male
22.0
42_1
85 years, male
21.6
315_1
62 years, female
21.5
9_1
66 years, female
21.3
126_1
63 years, male
21.1
2_1
77 years, female
20.6
119_1
70 years, female
20.0
139_1
64 years, female
19.1
217_1
76 years, male
19.0
415_1
77 years, female
17.6
495_1
57 years, female
17.0
466_1
57 years, female
16.9
81_1
67 years, male
16.6
32_1
67 years, male
15.0
43_1
64 years, female
14.7
89_1
63 years, male
14.6
162_1
79 years, female
14.4
414_1
84 years, female
14.1
501_1
88 years, male
12.4
142_1
61 years, female
12.3
149_1
88 years, male
8.0
413_1
59 years, female
7.4
491_1
89 years, female
5.7
490_1
67 years, female
4.5
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
