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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:51.0 nTPM
HPA Brain:75.8 nTPM
GTEx:51.0 nTPM
FANTOM5:37.1 Scaled Tags Per Million
Pig:43.8 nTPM
Mouse:24.2 nTPM
Allen mouse:0.0 Expression energy

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA055904
Glial cells Not detected
Neuronal cells High



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

75.8
Sample id Sample description nTPM
Caudate nucleus
nTPM: 53.9
2290 Female, age 72, unknown 68.1
1781 Male, age 74, unknown 67.2
2481 Female, age 94, left hemisphere 62.3
1857 Female, age 85, left hemisphere 51.8
2288 Male, age 75, left hemisphere 50.3
2846 Female, age 79, unknown 46.0
1854 Male, age 80, left hemisphere 43.0
2289 Male, age 61, right hemisphere 42.3
Globus pallidus, externus
nTPM: 53.3
2772 Female, age 79, unknown 71.7
1996 Male, age 80, right hemisphere 56.4
2567 Female, age 72, unknown 48.6
2395 Male, age 75, both hemispheres 45.6
2646 Male, age 61, right hemisphere 44.3
Globus pallidus, internus
nTPM: 51.8
2483 Female, age 94, right hemisphere 67.2
2778 Female, age 91, both hemispheres 61.7
2287 Male, age 75, right hemisphere 56.1
2037 Male, age 80, right hemisphere 47.0
2566 Female, age 72, unknown 44.5
1818 Male, age 74, unknown 44.3
2111 Female, age 85, right hemisphere 41.5
Nucleus accumbens
nTPM: 51.5
1783 Male, age 74, unknown 69.4
1806 Female, age 85, left hemisphere 64.4
2286 Male, age 75, left hemisphere 59.3
1856 Female, age 91, right hemisphere 52.1
2824 Male, age 61, right hemisphere 48.5
2732 Male, age 80, right hemisphere 43.2
2698 Female, age 72, unknown 40.0
2391 Female, age 94, left hemisphere 35.2
Nucleus basalis of Meynert
nTPM: 45.4
2484 Female, age 94, left hemisphere 55.9
2821 Male, age 75, both hemispheres 46.0
2569 Male, age 61, both hemispheres 41.3
2393 Male, age 80, right hemisphere 38.4
Nucleus of the diagonal band
nTPM: 75.8
2775 Male, age 80, right hemisphere 93.8
2029 Male, age 61, right hemisphere 93.5
1812 Female, age 91, both hemispheres 71.3
2195 Female, age 85, both hemispheres 69.6
1979 Male, age 74, unknown 50.6
Putamen
nTPM: 49.0
2466 Female, age 79, unknown 62.8
1937 Female, age 91, right hemisphere 60.9
2482 Female, age 94, left hemisphere 51.4
2647 Male, age 75, left hemisphere 50.4
2489 Female, age 72, unknown 43.0
1838 Male, age 80, right hemisphere 40.9
1829 Male, age 74, unknown 33.4
Septal nuclei
nTPM: 68.0
1960 Male, age 74, unknown 107.2
2031 Female, age 72, unknown 86.6
2059 Female, age 85, both hemispheres 78.3
2009 Female, age 91, both hemispheres 61.9
2199 Male, age 80, right hemisphere 48.1
2394 Male, age 61, left hemisphere 47.0
2629 Female, age 94, right hemisphere 46.8
Stria terminalis, bed nucleus
nTPM: 72.8
1974 Female, age 91, both hemispheres 91.9
2486 Female, age 94, both hemispheres 69.4
2201 Male, age 74, unknown 57.2

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

51.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 49.3
Samples: 246

Max nTPM: 170.5
Min nTPM: 7.0
Std nTPM: 29.0
Median nTPM: 41.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 170.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 160.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 158.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 148.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 147.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 136.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 134.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 125.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 110.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 110.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 103.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 101.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 100.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 99.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 97.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 94.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 94.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 92.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 92.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 92.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 91.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 91.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 90.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 90.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 90.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 89.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 89.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 89.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 88.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 86.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 86.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 85.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 84.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 83.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 78.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 78.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 78.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 77.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 76.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 76.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 75.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 75.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 74.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 73.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 73.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 70.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 69.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 69.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 69.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 67.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 67.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 66.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 66.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 65.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 65.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 64.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 64.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 64.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 63.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 63.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 62.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 61.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 61.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 61.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 61.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 60.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 60.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 60.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 59.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 57.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 57.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 57.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 57.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 56.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 55.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 55.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 55.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 55.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 55.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 55.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 54.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 54.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 53.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 53.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 52.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 51.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 51.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 51.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 51.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 50.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 50.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 50.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 50.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 50.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 49.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 49.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 48.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 48.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 48.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 48.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 48.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 47.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 47.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 47.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 46.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 46.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 46.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 46.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 46.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 44.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 44.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 44.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 44.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 43.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 43.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 43.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 43.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 43.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 43.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 42.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 42.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 41.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 41.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 41.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 41.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 40.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 40.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 40.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 40.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 40.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 40.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 39.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 39.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 38.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 38.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 37.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 37.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 37.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 36.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 36.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 36.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 36.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 36.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 36.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 35.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 35.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 35.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 35.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 35.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 34.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 34.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 34.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 34.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 34.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 34.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 34.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 34.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 33.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 33.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 33.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 33.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 33.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 33.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 32.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 32.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 32.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 32.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 32.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 32.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 32.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 32.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 31.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 31.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 31.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 31.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 31.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 31.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 30.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 30.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 30.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 30.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 29.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 29.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 29.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 29.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 29.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 29.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 28.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 28.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 28.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 28.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 28.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 28.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 27.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 27.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 27.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 27.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 27.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 26.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 26.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 26.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 26.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 26.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 25.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 25.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 25.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 24.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 24.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 24.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 24.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 24.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 23.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 23.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 23.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 23.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 23.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 22.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 22.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 22.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 22.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 22.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 22.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 21.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 21.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 19.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 19.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 19.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 18.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 18.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 18.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 18.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 18.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 18.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 17.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 15.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 15.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 14.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 13.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 13.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 12.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 11.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 11.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 10.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 10.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 8.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 7.0
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 48.1
Samples: 246

Max nTPM: 268.7
Min nTPM: 6.3
Std nTPM: 29.1
Median nTPM: 41.2
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 268.7
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 170.9
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 131.6
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 128.1
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 120.6
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 120.6
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 114.0
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 112.0
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 104.2
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 103.2
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 103.0
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 101.7
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 97.4
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 96.1
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 95.4
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 94.1
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 91.1
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 90.8
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 90.7
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 87.9
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 86.3
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 85.8
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 83.2
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 81.2
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 81.0
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 80.4
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 79.7
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 76.0
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 75.5
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 75.5
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 74.7
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 74.2
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 74.1
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 73.9
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 73.8
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 71.6
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 71.4
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 69.7
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 69.6
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 69.4
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 69.1
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 68.6
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 68.5
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 68.2
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 68.0
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 67.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 67.5
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 67.0
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 66.0
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 65.1
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 64.9
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 64.3
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 63.8
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 63.7
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 63.3
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 63.3
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 63.0
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 62.0
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 62.0
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 61.8
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 61.7
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 61.5
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 61.4
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 61.3
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 61.1
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 60.7
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 60.5
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 60.4
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 59.7
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 59.5
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 59.0
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 58.4
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 58.2
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 58.1
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 57.7
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 57.6
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 56.6
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 56.4
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 55.9
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 55.5
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 55.3
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 55.2
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 55.1
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 54.9
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 54.8
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 54.7
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 54.4
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 53.7
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 53.4
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 52.9
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 52.3
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 52.0
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 51.9
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 51.5
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 50.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 49.9
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 49.0
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 48.9
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 48.6
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 48.4
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 48.2
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 48.2
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 47.5
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 47.4
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 47.3
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 47.1
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 47.1
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 46.8
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 46.4
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 46.0
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 45.9
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 45.5
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 45.1
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 45.1
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 45.0
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 44.9
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 44.1
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 43.7
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 43.6
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 41.8
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 41.6
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 41.5
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 41.5
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 41.0
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 40.6
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 40.3
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 40.2
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 40.0
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 40.0
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 39.9
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 39.9
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 39.9
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 39.5
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 38.9
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 38.7
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 38.6
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 38.6
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 37.8
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 37.8
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 37.8
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 37.7
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 37.7
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 37.6
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 37.5
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 37.4
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 36.9
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 36.4
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 36.2
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 36.1
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 36.0
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 36.0
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 35.7
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 35.6
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 35.5
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 34.9
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 34.9
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 34.6
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 34.3
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 34.1
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 34.0
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 33.7
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 33.5
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 33.1
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 32.9
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 32.7
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 32.4
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 32.3
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 32.2
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 32.1
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 31.6
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 31.2
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 30.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 30.6
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 30.5
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 30.3
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 30.2
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 29.7
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 29.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 29.6
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 29.5
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 29.3
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 29.3
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 29.1
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 28.9
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 28.6
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 28.6
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 28.4
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 28.2
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 28.1
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 27.9
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 26.9
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 26.6
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 26.3
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 25.6
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 25.6
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 25.4
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 25.4
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 25.3
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 25.2
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 24.9
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 24.9
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 24.8
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 24.6
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 24.6
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 24.3
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 24.1
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 23.9
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 23.6
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 23.5
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 23.4
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 23.3
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 23.1
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 22.5
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 22.1
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 21.9
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 21.9
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 21.6
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 20.6
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 20.4
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 20.1
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 20.0
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 18.1
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 18.0
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 17.8
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 17.6
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 17.5
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 17.5
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 17.1
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 17.0
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 16.9
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 16.8
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 16.2
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 16.1
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 16.1
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 16.0
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 15.9
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 15.4
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 15.3
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 14.3
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 13.5
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 12.6
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 12.0
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 11.3
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 10.8
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 10.5
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 6.3
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Brain - Putamen (basal ganglia)
Average nTPM: 51.0
Samples: 205

Max nTPM: 177.6
Min nTPM: 9.6
Std nTPM: 26.9
Median nTPM: 45.9
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 177.6
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 176.7
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 176.7
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 119.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 115.9
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 115.1
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 112.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 110.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 109.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 104.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 96.5
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 95.8
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 92.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 92.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 90.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 90.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 90.0
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 87.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 86.5
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 85.5
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 83.5
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 81.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 80.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 77.1
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 76.8
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 76.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 76.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 75.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 75.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 74.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 74.1
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 74.0
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 73.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 71.5
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 70.4
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 70.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 69.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 67.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 67.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 66.3
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 66.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 65.4
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 65.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 64.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 63.6
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 63.0
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 62.9
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 62.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 62.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 62.3
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 62.2
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 61.9
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 61.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 61.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 61.0
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 60.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 59.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 59.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 58.7
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 58.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 58.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 58.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 58.1
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 57.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 56.7
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 56.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 56.7
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 56.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 56.2
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 56.0
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 56.0
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 55.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 54.6
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 54.3
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 54.0
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 53.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 53.1
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 53.1
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 53.0
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 52.8
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 52.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 52.5
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 52.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 51.8
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 51.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 51.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 51.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 50.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 50.1
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 50.0
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 49.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 49.5
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 49.5
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 48.6
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 48.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 48.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 48.0
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 47.9
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 47.7
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 47.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 47.7
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 47.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 45.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 45.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 45.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 45.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 44.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 43.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 43.6
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 43.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 43.4
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 43.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 42.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 42.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 42.5
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 42.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 42.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 41.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 41.5
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 41.4
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 41.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 41.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 40.9
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 40.7
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 40.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 40.3
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 39.5
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 39.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 39.0
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 38.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 38.6
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 38.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 38.5
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 38.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 38.2
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 38.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 38.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 38.0
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 37.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 37.6
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 37.4
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 37.2
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 37.0
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 35.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 35.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 34.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 34.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 34.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 33.8
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 33.6
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 33.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 33.1
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 32.5
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 32.5
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 32.1
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 32.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 31.9
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 31.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 31.3
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 31.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 30.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 30.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 30.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 30.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 29.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 29.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 29.0
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 28.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 28.7
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 28.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 28.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 27.6
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 27.5
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 27.3
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 27.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 27.0
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 26.0
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 25.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 25.7
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 25.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 25.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 24.9
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 24.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 24.6
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 24.0
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 23.8
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 23.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 23.2
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 21.7
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 21.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 21.4
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 21.0
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 20.7
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 20.6
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 20.3
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 20.0
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 19.8
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 19.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 18.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 16.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 16.0
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 15.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 15.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 9.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 9.6
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

37.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 31.8
FF:10164-103B2 76 years, female 31.8
Nucleus accumbens
Scaled Tags Per Million: 28.4
FF:10037-101F1 23-56 years, mixed 28.4
Putamen
Scaled Tags Per Million: 25.5
FF:10176-103C5 60 years, female 25.5
Globus pallidus
Scaled Tags Per Million: 37.1
FF:10175-103C4 60 years, female 49.4
FF:10161-103A8 76 years, female 24.9

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

43.8
Pig sample Sample description nTPM
Caudate
nTPM: 38.4
Samples: 4

Max nTPM: 55.8
Min nTPM: 23.2
Sample A Female 23.2
Sample B Female 55.8
Sample C Male 39.8
Sample D Male 34.9
Putamen
nTPM: 43.8
Samples: 4

Max nTPM: 50.2
Min nTPM: 37.8
Sample A Female 42.9
Sample B Female 50.2
Sample C Male 44.4
Sample D Male 37.8
Septum
nTPM: 34.1
Samples: 4

Max nTPM: 44.2
Min nTPM: 20.4
Sample A Female 44.2
Sample B Female 39.0
Sample C Male 32.6
Sample D Male 20.4
Ventral pallidum
nTPM: 36.4
Samples: 4

Max nTPM: 49.2
Min nTPM: 26.9
Sample A Female 28.7
Sample B Female 49.2
Sample C Male 40.8
Sample D Male 26.9

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

24.2
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 13.8
Samples: 4

Max nTPM: 21.8
Min nTPM: 8.1
Sample A Male 15.4
Sample B Male 21.8
Sample C Female 10.0
Sample D Female 8.1
Septum
nTPM: 24.2
Samples: 4

Max nTPM: 31.3
Min nTPM: 17.5
Sample A Male 21.1
Sample B Male 31.3
Sample C Female 27.0
Sample D Female 17.5
Ventral forebrain
nTPM: 20.7
Samples: 4

Max nTPM: 29.7
Min nTPM: 15.1
Sample A Male 22.9
Sample B Male 15.1
Sample C Female 29.7
Sample D Female 15.2

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.0
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.0
74635144 Antisense, RP_060215_03_D09, Mouse strain C57BL/6J (56 days, male) 0.0
Pallidum
Expression energy: 0.0
74635144 Antisense, RP_060215_03_D09, Mouse strain C57BL/6J (56 days, male) 0.0

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