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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:52.1 nTPM
HPA Brain:108.7 nTPM
GTEx:52.1 nTPM
FANTOM5:48.1 Scaled Tags Per Million
Pig:26.4 nTPM
Mouse:68.5 nTPM
Allen mouse:0.1 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA007039
Glial cells Low
Neuronal cells Low



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

108.7
Sample id Sample description nTPM
Caudate nucleus
nTPM: 97.9
2290 Female, age 72, unknown 120.1
2846 Female, age 79, unknown 111.4
1781 Male, age 74, unknown 109.6
1857 Female, age 85, left hemisphere 100.5
2288 Male, age 75, left hemisphere 97.8
1854 Male, age 80, left hemisphere 95.4
2289 Male, age 61, right hemisphere 91.2
2481 Female, age 94, left hemisphere 57.0
Globus pallidus, externus
nTPM: 51.3
2567 Female, age 72, unknown 66.9
2646 Male, age 61, right hemisphere 59.6
2772 Female, age 79, unknown 53.7
2395 Male, age 75, both hemispheres 38.2
1996 Male, age 80, right hemisphere 38.1
Globus pallidus, internus
nTPM: 41.2
2566 Female, age 72, unknown 55.2
2483 Female, age 94, right hemisphere 54.0
1818 Male, age 74, unknown 46.5
2037 Male, age 80, right hemisphere 37.8
2111 Female, age 85, right hemisphere 35.1
2778 Female, age 91, both hemispheres 30.8
2287 Male, age 75, right hemisphere 29.0
Nucleus accumbens
nTPM: 83.4
1783 Male, age 74, unknown 122.9
1856 Female, age 91, right hemisphere 106.3
2824 Male, age 61, right hemisphere 100.8
1806 Female, age 85, left hemisphere 90.9
2286 Male, age 75, left hemisphere 81.6
2698 Female, age 72, unknown 67.9
2732 Male, age 80, right hemisphere 53.3
2391 Female, age 94, left hemisphere 43.3
Nucleus basalis of Meynert
nTPM: 81.8
2393 Male, age 80, right hemisphere 86.3
2484 Female, age 94, left hemisphere 84.1
2569 Male, age 61, both hemispheres 79.7
2821 Male, age 75, both hemispheres 77.4
Nucleus of the diagonal band
nTPM: 101.0
2029 Male, age 61, right hemisphere 125.4
2775 Male, age 80, right hemisphere 110.3
2195 Female, age 85, both hemispheres 110.0
1812 Female, age 91, both hemispheres 96.2
1979 Male, age 74, unknown 62.8
Putamen
nTPM: 108.7
2647 Male, age 75, left hemisphere 137.5
1829 Male, age 74, unknown 119.5
2489 Female, age 72, unknown 118.1
1937 Female, age 91, right hemisphere 109.5
2466 Female, age 79, unknown 108.2
1838 Male, age 80, right hemisphere 107.1
2482 Female, age 94, left hemisphere 60.9
Septal nuclei
nTPM: 98.2
1960 Male, age 74, unknown 134.5
2059 Female, age 85, both hemispheres 117.1
2031 Female, age 72, unknown 109.8
2629 Female, age 94, right hemisphere 95.4
2009 Female, age 91, both hemispheres 88.3
2394 Male, age 61, left hemisphere 83.9
2199 Male, age 80, right hemisphere 58.6
Stria terminalis, bed nucleus
nTPM: 85.4
2486 Female, age 94, both hemispheres 102.4
1974 Female, age 91, both hemispheres 99.3
2201 Male, age 74, unknown 54.4

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

52.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 49.2
Samples: 246

Max nTPM: 110.6
Min nTPM: 7.6
Std nTPM: 23.4
Median nTPM: 49.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 110.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 108.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 107.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 105.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 99.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 97.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 95.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 92.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 91.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 90.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 90.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 90.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 89.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 88.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 88.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 87.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 87.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 87.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 86.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 86.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 85.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 85.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 83.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 82.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 80.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 80.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 79.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 78.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 77.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 76.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 76.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 76.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 75.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 74.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 74.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 74.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 74.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 73.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 73.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 72.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 72.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 71.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 71.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 70.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 70.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 70.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 69.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 69.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 68.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 68.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 68.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 68.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 68.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 67.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 67.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 67.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 66.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 66.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 66.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 66.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 65.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 65.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 65.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 65.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 65.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 64.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 64.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 64.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 63.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 63.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 63.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 63.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 63.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 62.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 61.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 61.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 61.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 61.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 61.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 61.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 61.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 60.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 60.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 59.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 59.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 58.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 58.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 58.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 58.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 58.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 58.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 58.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 58.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 58.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 58.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 57.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 57.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 57.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 57.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 57.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 56.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 55.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 55.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 55.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 55.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 55.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 54.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 54.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 54.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 54.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 53.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 52.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 52.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 52.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 52.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 51.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 50.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 50.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 50.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 49.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 49.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 49.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 49.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 49.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 48.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 48.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 47.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 47.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 47.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 46.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 46.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 46.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 46.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 45.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 45.8
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 44.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 44.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 44.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 43.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 43.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 43.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 43.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 42.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 41.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 41.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 41.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 40.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 40.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 40.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 39.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 39.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 39.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 39.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 39.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 39.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 38.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 38.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 38.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 38.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 37.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 37.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 37.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 37.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 37.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 36.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 36.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 35.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 35.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 34.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 34.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 33.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 33.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 33.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 32.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 32.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 31.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 31.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 30.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 30.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 29.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 29.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 29.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 29.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 29.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 29.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 29.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 28.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 28.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 27.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 27.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 27.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 27.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 26.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 26.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 25.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 25.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 25.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 25.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 24.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 24.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 24.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 23.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 23.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 23.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 23.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 23.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 22.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 22.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 22.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 21.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 20.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 20.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 20.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 20.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 19.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 19.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 19.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 19.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 19.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 19.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 19.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 18.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 18.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 17.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 17.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 17.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 17.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 16.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 16.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 16.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 16.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 15.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 15.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 14.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 13.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 13.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 12.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 12.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 12.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 11.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 10.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 10.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 9.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 9.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 8.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 7.6
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 52.1
Samples: 246

Max nTPM: 137.9
Min nTPM: 7.6
Std nTPM: 22.1
Median nTPM: 52.4
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 137.9
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 114.0
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 105.0
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 101.9
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 100.0
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 99.2
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 93.1
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 92.3
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 92.0
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 91.0
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 89.3
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 88.5
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 88.4
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 88.3
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 88.1
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 86.7
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 86.4
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 83.7
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 83.1
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 83.0
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 81.9
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 81.2
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 80.7
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 80.5
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 80.4
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 78.3
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 78.1
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 77.9
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 77.6
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 77.3
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 77.2
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 76.4
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 76.0
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 75.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 75.4
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 74.7
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 74.7
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 74.0
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 74.0
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 73.6
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 73.4
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 73.2
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 73.2
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 72.5
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 71.3
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 71.3
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 70.6
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 70.5
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 70.1
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 70.1
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 69.7
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 68.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 68.7
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 68.4
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 68.0
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 67.0
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 66.9
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 66.9
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 66.7
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 66.5
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 66.5
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 66.1
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 66.1
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 65.7
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 65.3
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 65.3
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 65.1
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 65.0
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 64.1
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 64.0
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 64.0
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 63.4
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 63.2
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 63.2
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 63.0
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 62.9
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 62.8
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 62.7
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 62.6
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 62.3
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 62.2
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 61.9
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 61.8
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 61.2
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 61.2
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 61.2
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 61.1
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 61.0
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 60.5
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 60.2
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 60.0
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 58.6
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 58.4
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 58.2
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 57.9
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 57.8
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 57.5
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 57.4
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 57.4
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 57.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 57.1
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 57.1
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 56.9
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 56.8
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 56.7
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 56.7
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 56.6
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 56.6
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 55.4
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 55.4
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 55.1
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 55.0
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 55.0
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 54.8
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 54.8
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 54.4
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 54.2
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 53.7
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 53.6
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 53.2
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 53.1
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 52.9
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 52.5
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 52.3
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 51.9
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 51.7
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 51.5
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 51.4
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 51.3
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 51.2
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 51.2
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 50.5
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 50.4
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 49.8
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 49.6
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 49.4
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 49.4
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 49.2
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 48.3
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 48.1
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 47.7
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 47.7
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 47.2
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 46.9
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 46.9
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 46.8
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 46.7
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 46.7
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 46.4
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 46.1
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 46.0
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 46.0
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 45.7
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 45.0
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 44.8
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 44.5
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 44.2
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 44.1
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 44.1
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 44.0
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 43.9
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 43.7
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 43.3
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 43.3
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 43.1
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 43.0
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 42.8
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 42.3
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 42.2
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 41.8
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 41.5
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 41.1
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 41.1
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 41.0
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 40.6
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 40.5
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 40.0
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 40.0
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 39.9
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 39.3
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 38.8
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 38.4
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 38.0
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 37.7
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 37.7
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 37.5
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 35.4
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 35.3
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 35.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 35.2
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 35.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 35.0
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 34.8
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 34.5
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 34.4
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 33.6
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 32.6
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 31.9
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 31.4
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 31.0
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 30.7
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 29.9
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 28.6
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 28.6
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 27.6
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 27.5
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 26.8
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 25.7
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 25.1
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 24.9
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 24.1
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 23.6
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 23.6
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 23.5
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 23.2
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 22.6
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 21.7
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 21.6
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 21.6
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 21.3
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 21.2
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 21.0
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 20.7
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 20.2
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 20.0
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 19.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 19.6
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 19.2
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 18.4
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 18.0
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 17.1
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 17.0
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 16.8
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 16.5
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 15.8
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 15.8
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 14.8
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 14.3
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 13.9
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 13.7
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 13.3
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 13.3
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 13.2
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 9.9
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 9.0
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 7.6
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Brain - Putamen (basal ganglia)
Average nTPM: 50.0
Samples: 205

Max nTPM: 115.3
Min nTPM: 7.9
Std nTPM: 25.1
Median nTPM: 50.5
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 115.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 110.8
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 107.5
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 104.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 101.4
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 97.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 96.6
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 96.6
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 96.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 93.5
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 92.8
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 92.8
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 92.7
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 90.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 89.9
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 89.4
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 88.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 87.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 87.7
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 85.7
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 85.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 85.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 84.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 83.4
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 82.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 81.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 81.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 81.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 80.9
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 80.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 78.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 78.1
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 77.0
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 76.1
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 76.0
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 75.7
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 74.5
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 74.3
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 74.2
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 72.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 71.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 70.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 70.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 69.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 68.2
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 67.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 67.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 66.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 66.5
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 65.6
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 65.5
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 65.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 65.0
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 64.9
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 64.9
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 64.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 63.9
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 63.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 63.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 63.6
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 63.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 63.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 63.0
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 62.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 62.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 61.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 61.7
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 60.9
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 60.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 60.9
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 60.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 60.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 60.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 59.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 59.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 58.6
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 58.5
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 58.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 58.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 58.4
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 58.2
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 58.0
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 57.5
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 57.4
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 56.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 56.7
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 56.5
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 56.4
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 56.4
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 55.8
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 55.6
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 55.5
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 55.1
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 54.0
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 53.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 53.6
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 52.6
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 52.6
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 52.2
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 51.3
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 51.0
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 51.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 50.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 50.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 50.1
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 49.8
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 47.9
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 47.7
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 47.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 46.7
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 46.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 46.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 45.7
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 45.5
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 44.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 44.8
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 44.5
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 43.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 43.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 42.8
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 42.7
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 41.8
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 41.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 41.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 41.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 41.3
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 41.1
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 40.3
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 39.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 39.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 39.6
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 39.4
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 39.3
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 38.0
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 37.5
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 36.8
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 36.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 36.3
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 35.8
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 35.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 34.1
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 33.1
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 32.9
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 32.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 32.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 32.4
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 32.2
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 31.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 31.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 31.7
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 31.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 31.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 31.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 31.1
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 31.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 29.4
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 29.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 27.1
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 27.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 27.0
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 26.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 25.6
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 25.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 25.0
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 24.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 23.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 23.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 21.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 21.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 21.2
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 20.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 19.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 19.5
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 19.0
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 19.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 19.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 18.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 18.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 18.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 17.5
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 16.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 16.7
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 16.7
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 16.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 16.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 16.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 15.5
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 15.3
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 15.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 14.5
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 14.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 14.2
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 13.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 13.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 12.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 12.2
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 11.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 11.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 11.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 11.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 10.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 10.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 8.3
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 8.3
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 7.9
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

48.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 46.0
FF:10164-103B2 76 years, female 46.0
Nucleus accumbens
Scaled Tags Per Million: 48.1
FF:10037-101F1 23-56 years, mixed 48.1
Putamen
Scaled Tags Per Million: 39.8
FF:10176-103C5 60 years, female 39.8
Globus pallidus
Scaled Tags Per Million: 21.0
FF:10161-103A8 76 years, female 26.3
FF:10175-103C4 60 years, female 15.6

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

26.4
Pig sample Sample description nTPM
Caudate
nTPM: 26.4
Samples: 4

Max nTPM: 32.9
Min nTPM: 19.6
Sample A Female 19.6
Sample B Female 28.4
Sample C Male 32.9
Sample D Male 24.8
Putamen
nTPM: 25.0
Samples: 4

Max nTPM: 28.5
Min nTPM: 17.4
Sample A Female 17.4
Sample B Female 26.0
Sample C Male 28.2
Sample D Male 28.5
Septum
nTPM: 20.4
Samples: 4

Max nTPM: 23.6
Min nTPM: 17.6
Sample A Female 21.8
Sample B Female 23.6
Sample C Male 18.6
Sample D Male 17.6
Ventral pallidum
nTPM: 26.0
Samples: 4

Max nTPM: 35.1
Min nTPM: 18.6
Sample A Female 18.6
Sample B Female 28.1
Sample C Male 35.1
Sample D Male 22.2

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

68.5
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 68.5
Samples: 4

Max nTPM: 86.5
Min nTPM: 57.6
Sample A Male 62.8
Sample B Male 86.5
Sample C Female 57.6
Sample D Female 67.2
Septum
nTPM: 39.5
Samples: 4

Max nTPM: 45.5
Min nTPM: 34.0
Sample A Male 45.5
Sample B Male 39.9
Sample C Female 38.7
Sample D Female 34.0
Ventral forebrain
nTPM: 64.9
Samples: 4

Max nTPM: 73.7
Min nTPM: 57.4
Sample A Male 70.8
Sample B Male 57.6
Sample C Female 73.7
Sample D Female 57.4

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.1
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.1
71212596 Antisense, RP_050816_03_E05, Mouse strain C57BL/6J (56 days, male) 0.2
74003377 Antisense, RP_051019_03_A01, Mouse strain C57BL/6J (56 days, male) 0.0
Pallidum
Expression energy: 0.0
71212596 Antisense, RP_050816_03_E05, Mouse strain C57BL/6J (56 days, male) 0.1
74003377 Antisense, RP_051019_03_A01, Mouse strain C57BL/6J (56 days, male) 0.0

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