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ATP5IF1
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  • ATP5IF1
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:360.4 nTPM
HPA Brain:44.6 nTPM
GTEx:360.4 nTPM
FANTOM5:734.1 Scaled Tags Per Million
Pig:269.2 nTPM
Mouse:610.9 nTPM
Allen mouse:8.6 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA027999
Glial cells Not detected
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

44.6
Sample id Sample description nTPM
Caudate nucleus
nTPM: 38.8
1857 Female, age 85, left hemisphere 44.9
2846 Female, age 79, unknown 42.5
2288 Male, age 75, left hemisphere 40.1
1781 Male, age 74, unknown 39.5
1854 Male, age 80, left hemisphere 37.4
2481 Female, age 94, left hemisphere 37.2
2290 Female, age 72, unknown 36.9
2289 Male, age 61, right hemisphere 32.2
Globus pallidus, externus
nTPM: 25.3
2395 Male, age 75, both hemispheres 30.7
2772 Female, age 79, unknown 30.7
2646 Male, age 61, right hemisphere 24.2
1996 Male, age 80, right hemisphere 22.0
2567 Female, age 72, unknown 19.1
Globus pallidus, internus
nTPM: 27.5
2483 Female, age 94, right hemisphere 31.6
2287 Male, age 75, right hemisphere 31.2
2778 Female, age 91, both hemispheres 30.1
1818 Male, age 74, unknown 29.7
2566 Female, age 72, unknown 26.0
2037 Male, age 80, right hemisphere 24.4
2111 Female, age 85, right hemisphere 19.5
Nucleus accumbens
nTPM: 39.4
2698 Female, age 72, unknown 53.6
1856 Female, age 91, right hemisphere 51.9
2824 Male, age 61, right hemisphere 39.1
2286 Male, age 75, left hemisphere 38.8
1783 Male, age 74, unknown 38.3
1806 Female, age 85, left hemisphere 37.0
2391 Female, age 94, left hemisphere 34.5
2732 Male, age 80, right hemisphere 22.4
Nucleus basalis of Meynert
nTPM: 34.5
2821 Male, age 75, both hemispheres 46.1
2393 Male, age 80, right hemisphere 35.2
2484 Female, age 94, left hemisphere 34.4
2569 Male, age 61, both hemispheres 22.2
Nucleus of the diagonal band
nTPM: 44.6
2195 Female, age 85, both hemispheres 52.6
2775 Male, age 80, right hemisphere 49.9
1812 Female, age 91, both hemispheres 47.2
1979 Male, age 74, unknown 39.1
2029 Male, age 61, right hemisphere 34.1
Putamen
nTPM: 36.4
1937 Female, age 91, right hemisphere 42.1
1838 Male, age 80, right hemisphere 40.9
2466 Female, age 79, unknown 38.5
2482 Female, age 94, left hemisphere 37.3
1829 Male, age 74, unknown 36.0
2647 Male, age 75, left hemisphere 34.4
2489 Female, age 72, unknown 25.8
Septal nuclei
nTPM: 40.4
1960 Male, age 74, unknown 54.6
2629 Female, age 94, right hemisphere 50.7
2031 Female, age 72, unknown 46.3
2059 Female, age 85, both hemispheres 36.7
2009 Female, age 91, both hemispheres 36.5
2199 Male, age 80, right hemisphere 29.6
2394 Male, age 61, left hemisphere 28.0
Stria terminalis, bed nucleus
nTPM: 44.5
1974 Female, age 91, both hemispheres 53.3
2201 Male, age 74, unknown 41.0
2486 Female, age 94, both hemispheres 39.2

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

360.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 309.1
Samples: 246

Max nTPM: 827.5
Min nTPM: 107.2
Std nTPM: 120.1
Median nTPM: 298.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 827.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 726.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 698.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 691.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 671.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 669.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 627.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 588.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 585.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 566.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 542.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 535.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 515.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 502.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 494.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 493.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 483.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 481.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 480.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 469.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 468.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 468.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 463.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 460.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 455.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 451.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 450.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 449.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 444.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 443.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 442.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 442.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 435.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 433.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 431.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 420.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 419.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 418.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 417.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 414.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 399.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 398.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 398.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 396.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 394.8
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 392.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 392.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 391.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 390.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 390.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 388.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 386.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 386.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 382.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 377.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 376.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 373.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 370.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 370.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 369.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 367.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 365.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 364.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 363.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 362.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 360.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 359.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 358.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 358.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 357.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 354.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 353.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 352.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 350.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 349.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 347.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 346.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 346.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 345.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 345.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 345.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 344.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 342.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 341.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 340.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 339.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 339.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 337.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 337.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 332.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 331.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 331.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 330.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 330.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 328.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 326.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 324.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 323.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 323.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 323.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 319.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 317.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 316.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 314.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 313.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 311.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 310.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 310.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 310.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 309.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 309.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 309.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 307.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 306.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 304.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 303.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 303.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 300.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 300.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 300.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 300.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 299.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 298.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 298.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 297.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 296.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 294.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 293.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 292.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 289.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 288.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 288.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 288.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 287.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 287.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 287.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 286.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 286.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 286.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 285.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 284.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 281.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 281.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 280.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 280.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 276.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 276.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 275.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 273.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 273.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 268.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 267.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 265.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 263.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 262.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 261.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 261.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 260.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 260.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 258.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 258.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 258.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 255.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 250.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 249.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 247.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 247.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 247.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 246.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 244.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 243.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 242.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 240.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 240.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 237.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 236.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 235.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 229.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 228.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 226.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 225.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 225.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 224.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 223.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 223.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 222.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 222.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 220.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 217.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 216.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 215.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 213.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 211.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 211.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 208.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 208.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 206.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 204.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 203.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 198.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 195.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 194.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 194.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 189.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 188.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 187.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 186.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 184.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 182.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 180.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 179.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 178.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 178.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 177.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 176.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 176.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 174.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 173.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 171.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 166.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 164.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 163.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 163.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 161.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 161.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 160.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 160.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 159.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 157.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 157.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 153.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 152.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 150.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 146.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 146.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 143.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 142.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 141.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 139.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 136.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 134.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 131.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 129.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 126.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 121.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 107.2
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 360.4
Samples: 246

Max nTPM: 779.7
Min nTPM: 148.4
Std nTPM: 105.1
Median nTPM: 355.7
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 779.7
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 751.4
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 720.7
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 642.9
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 605.5
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 585.5
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 579.2
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 565.9
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 564.3
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 551.2
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 546.3
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 531.4
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 527.0
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 517.1
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 517.0
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 506.9
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 503.4
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 503.0
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 499.9
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 497.8
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 497.5
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 494.0
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 489.2
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 485.3
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 480.5
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 479.2
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 477.4
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 476.5
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 473.4
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 469.7
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 469.7
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 468.0
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 467.8
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 466.6
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 464.5
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 462.6
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 461.9
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 461.7
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 460.6
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 458.3
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 457.9
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 457.8
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 454.6
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 449.0
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 447.0
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 446.9
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 445.6
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 443.7
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 443.1
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 442.7
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 439.5
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 437.8
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 437.8
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 437.4
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 433.8
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 432.4
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 426.3
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 425.7
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 425.6
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 421.8
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 421.5
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 420.0
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 419.5
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 417.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 415.9
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 415.7
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 415.0
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 413.9
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 413.3
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 413.1
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 411.4
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 411.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 410.1
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 409.8
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 409.1
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 406.0
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 405.6
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 403.9
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 403.8
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 402.2
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 399.7
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 396.8
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 396.8
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 396.4
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 395.5
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 394.8
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 393.5
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 392.1
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 391.3
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 389.8
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 389.2
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 388.3
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 388.0
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 387.2
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 385.2
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 385.0
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 381.9
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 381.4
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 379.8
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 379.2
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 378.8
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 378.8
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 376.8
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 376.0
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 374.7
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 374.3
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 372.4
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 371.1
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 371.0
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 370.0
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 368.5
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 366.2
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 361.1
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 360.6
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 359.5
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 359.1
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 358.8
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 358.6
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 357.5
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 356.9
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 356.6
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 356.3
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 355.8
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 355.7
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 355.4
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 355.2
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 354.8
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 354.1
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 352.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 351.9
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 351.5
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 349.4
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 348.4
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 345.7
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 344.3
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 343.1
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 343.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 342.4
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 342.2
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 341.0
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 340.9
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 339.4
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 338.5
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 338.1
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 336.8
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 336.5
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 336.1
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 336.0
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 333.1
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 333.0
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 329.8
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 329.1
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 329.1
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 327.4
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 326.5
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 326.4
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 325.1
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 324.4
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 322.8
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 322.6
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 320.6
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 320.6
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 320.6
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 318.6
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 316.7
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 315.9
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 314.4
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 314.2
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 312.1
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 312.0
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 309.9
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 308.9
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 307.9
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 302.9
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 302.5
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 301.8
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 300.7
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 300.3
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 299.5
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 297.5
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 296.5
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 296.1
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 295.9
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 295.7
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 295.3
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 292.2
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 290.1
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 288.8
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 288.0
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 287.1
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 286.0
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 285.2
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 284.4
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 283.6
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 279.8
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 279.2
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 277.8
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 277.3
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 276.7
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 276.2
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 275.6
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 273.5
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 272.7
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 270.0
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 265.3
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 263.9
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 253.7
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 250.8
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 248.2
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 248.2
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 248.1
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 247.6
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 243.7
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 242.9
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 241.5
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 240.7
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 239.9
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 236.7
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 230.2
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 228.2
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 223.1
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 223.0
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 218.5
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 218.3
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 213.5
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 209.9
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 209.6
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 208.6
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 206.7
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 204.2
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 199.3
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 198.9
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 197.5
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 197.3
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 195.6
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 188.2
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 175.3
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 169.4
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 169.2
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 168.4
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 160.6
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 159.7
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 156.7
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 156.6
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 152.7
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 148.4
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Brain - Putamen (basal ganglia)
Average nTPM: 317.2
Samples: 205

Max nTPM: 693.1
Min nTPM: 111.9
Std nTPM: 113.0
Median nTPM: 298.0
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 693.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 587.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 568.7
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 566.7
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 560.4
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 557.8
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 555.6
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 555.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 540.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 531.5
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 526.3
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 520.9
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 503.2
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 494.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 493.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 493.5
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 492.4
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 489.8
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 483.3
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 479.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 477.3
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 474.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 466.5
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 464.7
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 462.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 457.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 457.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 455.9
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 453.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 452.3
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 452.2
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 442.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 441.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 439.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 436.7
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 432.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 431.3
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 431.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 423.4
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 421.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 417.3
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 416.5
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 415.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 414.6
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 411.2
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 403.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 402.2
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 399.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 399.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 397.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 395.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 394.7
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 393.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 388.8
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 388.2
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 388.2
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 386.6
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 385.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 383.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 380.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 378.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 377.8
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 371.4
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 370.1
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 368.1
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 366.4
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 365.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 362.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 361.2
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 361.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 354.8
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 353.6
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 350.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 348.8
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 348.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 347.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 345.8
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 345.6
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 344.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 340.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 337.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 336.5
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 334.7
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 333.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 333.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 332.5
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 331.0
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 328.6
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 325.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 325.2
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 324.4
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 317.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 316.9
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 313.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 310.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 306.5
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 305.0
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 304.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 304.2
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 303.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 300.0
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 298.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 298.0
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 297.7
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 296.0
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 295.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 295.6
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 294.9
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 294.1
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 292.9
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 290.0
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 287.9
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 287.5
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 285.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 285.1
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 284.5
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 283.8
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 283.5
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 280.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 279.8
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 277.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 275.5
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 274.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 273.6
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 273.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 272.6
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 268.8
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 268.5
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 267.9
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 265.9
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 264.9
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 264.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 263.6
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 261.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 260.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 257.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 252.2
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 251.3
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 251.2
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 249.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 248.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 245.8
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 239.2
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 238.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 238.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 238.0
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 236.5
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 232.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 230.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 228.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 227.5
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 227.0
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 225.2
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 225.0
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 224.1
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 222.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 219.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 219.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 218.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 216.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 213.8
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 212.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 211.8
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 211.7
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 211.7
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 211.0
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 210.0
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 205.2
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 204.0
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 200.0
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 199.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 199.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 198.7
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 192.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 192.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 191.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 188.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 187.7
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 186.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 186.3
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 185.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 184.0
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 183.9
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 182.7
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 182.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 181.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 180.7
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 178.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 178.0
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 176.7
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 175.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 172.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 171.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 171.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 167.7
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 165.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 155.5
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 153.4
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 151.7
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 150.0
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 137.3
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 133.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 132.3
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 122.9
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 111.9
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

734.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 534.0
FF:10164-103B2 76 years, female 534.0
Nucleus accumbens
Scaled Tags Per Million: 397.1
FF:10037-101F1 23-56 years, mixed 397.1
Putamen
Scaled Tags Per Million: 734.1
FF:10176-103C5 60 years, female 734.1
Globus pallidus
Scaled Tags Per Million: 426.6
FF:10175-103C4 60 years, female 585.4
FF:10161-103A8 76 years, female 267.9

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

269.2
Pig sample Sample description nTPM
Caudate
nTPM: 218.9
Samples: 4

Max nTPM: 250.6
Min nTPM: 201.6
Sample A Female 209.5
Sample B Female 214.0
Sample C Male 250.6
Sample D Male 201.6
Putamen
nTPM: 269.2
Samples: 4

Max nTPM: 409.0
Min nTPM: 211.3
Sample A Female 211.3
Sample B Female 215.5
Sample C Male 409.0
Sample D Male 241.1
Septum
nTPM: 219.8
Samples: 4

Max nTPM: 253.7
Min nTPM: 168.2
Sample A Female 253.7
Sample B Female 206.4
Sample C Male 251.0
Sample D Male 168.2
Ventral pallidum
nTPM: 224.7
Samples: 4

Max nTPM: 259.4
Min nTPM: 193.8
Sample A Female 259.4
Sample B Female 224.5
Sample C Male 220.9
Sample D Male 193.8

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

610.9
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 532.1
Samples: 4

Max nTPM: 565.8
Min nTPM: 501.8
Sample A Male 506.7
Sample B Male 565.8
Sample C Female 501.8
Sample D Female 554.1
Septum
nTPM: 611.0
Samples: 4

Max nTPM: 652.8
Min nTPM: 547.1
Sample A Male 598.0
Sample B Male 645.9
Sample C Female 652.8
Sample D Female 547.1
Ventral forebrain
nTPM: 592.7
Samples: 4

Max nTPM: 670.6
Min nTPM: 542.2
Sample A Male 576.3
Sample B Male 542.2
Sample C Female 670.6
Sample D Female 581.5

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

8.6
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 6.8
75774682 Antisense, RP_060530_01_D07, Mouse strain C57BL/6J (56 days, male) 8.9
67978746 Antisense, RP_040923_01_G06, Mouse strain C57BL/6J (56 days, male) 4.7
Pallidum
Expression energy: 8.6
75774682 Antisense, RP_060530_01_D07, Mouse strain C57BL/6J (56 days, male) 10.1
67978746 Antisense, RP_040923_01_G06, Mouse strain C57BL/6J (56 days, male) 7.0

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